EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000002772 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: rbm4l|wu:fc25a01
Full Name: RNA binding motif protein 4.1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 507 bases
Position: chrLG28:3733025-3733531
Accession: ZDB-GENE-030131-3902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003259	RRM_5	PF13893.6	1.2e-08	1	1
ENSLOCP00000003259	RRM_1	PF00076.22	6.5e-35	1	2
ENSLOCP00000003259	RRM_1	PF00076.22	6.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003266	-	447	-	ENSLOCP00000003259	149 (aa)	-	W5M4F1

Gene Model

Click here to download ENSLOCG00000002772's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002772's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000002772	rbm4.1	52	32.955	ENSLOCG00000004675	msi2b	70	32.955
ENSLOCG00000002772	rbm4.1	91	30.178	ENSLOCG00000011405	tial1	61	30.178
ENSLOCG00000002772	rbm4.1	87	32.927	ENSLOCG00000009363	elavl4	62	32.927

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002772	rbm4.1	99	63.043	ENSAPOG00000012375	-	97	63.043	Acanthochromis_polyacanthus
ENSLOCG00000002772	rbm4.1	99	63.043	ENSACIG00000016472	-	86	63.043	Amphilophus_citrinellus
ENSLOCG00000002772	rbm4.1	99	63.768	ENSAOCG00000010907	-	97	63.768	Amphiprion_ocellaris
ENSLOCG00000002772	rbm4.1	99	63.768	ENSAPEG00000009476	-	88	63.768	Amphiprion_percula
ENSLOCG00000002772	rbm4.1	99	65.693	ENSATEG00000001912	-	90	65.693	Anabas_testudineus
ENSLOCG00000002772	rbm4.1	93	69.565	ENSAMXG00000032121	rbm4.2	87	69.565	Astyanax_mexicanus
ENSLOCG00000002772	rbm4.1	97	45.833	ENSCPBG00000023666	-	93	45.833	Chrysemys_picta_bellii
ENSLOCG00000002772	rbm4.1	93	71.739	ENSCSEG00000007739	-	100	71.739	Cynoglossus_semilaevis
ENSLOCG00000002772	rbm4.1	93	81.884	ENSDARG00000036386	rbm4.1	79	81.884	Danio_rerio
ENSLOCG00000002772	rbm4.1	93	57.343	ENSEBUG00000007174	-	88	57.343	Eptatretus_burgeri
ENSLOCG00000002772	rbm4.1	99	62.319	ENSFHEG00000003483	-	91	62.319	Fundulus_heteroclitus
ENSLOCG00000002772	rbm4.1	99	63.043	ENSGAFG00000019301	-	91	63.043	Gambusia_affinis
ENSLOCG00000002772	rbm4.1	97	45.833	ENSGAGG00000014558	-	93	45.833	Gopherus_agassizii
ENSLOCG00000002772	rbm4.1	95	62.411	ENSHBUG00000011624	-	92	62.411	Haplochromis_burtoni
ENSLOCG00000002772	rbm4.1	99	61.594	ENSHCOG00000011413	-	81	61.594	Hippocampus_comes
ENSLOCG00000002772	rbm4.1	99	62.319	ENSLBEG00000019756	-	86	62.319	Labrus_bergylta
ENSLOCG00000002772	rbm4.1	97	50.694	ENSLACG00000006343	zgc:77262	51	50.694	Latimeria_chalumnae
ENSLOCG00000002772	rbm4.1	99	62.774	ENSMZEG00005028160	-	93	62.774	Maylandia_zebra
ENSLOCG00000002772	rbm4.1	95	63.636	ENSMZEG00005028161	-	79	63.636	Maylandia_zebra
ENSLOCG00000002772	rbm4.1	94	59.286	ENSMZEG00005009210	-	78	59.286	Maylandia_zebra
ENSLOCG00000002772	rbm4.1	100	60.759	ENSMMOG00000020484	-	98	60.759	Mola_mola
ENSLOCG00000002772	rbm4.1	95	61.702	ENSNBRG00000017763	-	91	61.702	Neolamprologus_brichardi
ENSLOCG00000002772	rbm4.1	100	79.195	ENSPKIG00000020805	rbm4.1	91	79.195	Paramormyrops_kingsleyae
ENSLOCG00000002772	rbm4.1	93	78.261	ENSPMGG00000004331	rbm4.1	93	78.261	Periophthalmus_magnuspinnatus
ENSLOCG00000002772	rbm4.1	93	50.360	ENSPMAG00000003433	rbm4.2	70	50.360	Petromyzon_marinus
ENSLOCG00000002772	rbm4.1	94	62.319	ENSPLAG00000018569	-	88	62.319	Poecilia_latipinna
ENSLOCG00000002772	rbm4.1	94	62.319	ENSPMEG00000006278	-	88	62.319	Poecilia_mexicana
ENSLOCG00000002772	rbm4.1	95	62.411	ENSPNYG00000004649	-	91	62.411	Pundamilia_nyererei
ENSLOCG00000002772	rbm4.1	99	49.660	ENSSFOG00015018567	zgc:77262	97	49.660	Scleropages_formosus
ENSLOCG00000002772	rbm4.1	99	64.493	ENSSMAG00000007575	-	90	64.493	Scophthalmus_maximus
ENSLOCG00000002772	rbm4.1	94	63.768	ENSXCOG00000003730	-	86	63.768	Xiphophorus_couchianus