EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000002879 (Gene tree)
Gene ID: 102687924
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix protein 3-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 94830 bases
Position: chrLG22:3086039-3180868
Accession: 102687924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003400	cwf21	PF08312.12	9.2e-16	1	1
ENSLOCP00000003391	cwf21	PF08312.12	2.5e-15	1	1
ENSLOCP00000003391	SRRM_C	PF15230.6	5.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003398	SRRM3-201	2178	-	ENSLOCP00000003391	667 (aa)	-	W5M4T3
ENSLOCT00000003407	SRRM3-202	2145	-	ENSLOCP00000003400	328 (aa)	XP_015222773	W5M4U2

Gene Model

Click here to download ENSLOCG00000002879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000002879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000002879	SRRM3	99	60.000	ENSAPOG00000000288	SRRM3	52	58.873	Acanthochromis_polyacanthus
ENSLOCG00000002879	SRRM3	94	58.282	ENSACAG00000000452	SRRM3	57	60.681	Anolis_carolinensis
ENSLOCG00000002879	SRRM3	99	57.542	ENSACLG00000005269	SRRM3	52	57.627	Astatotilapia_calliptera
ENSLOCG00000002879	SRRM3	98	62.651	ENSAMXG00000016051	-	52	61.329	Astyanax_mexicanus
ENSLOCG00000002879	SRRM3	82	50.890	ENSBTAG00000007879	-	81	51.601	Bos_taurus
ENSLOCG00000002879	SRRM3	59	58.685	ENSCAFG00000013537	SRRM3	71	55.822	Canis_familiaris
ENSLOCG00000002879	SRRM3	59	48.780	ENSCPOG00000038685	SRRM3	72	76.712	Cavia_porcellus
ENSLOCG00000002879	SRRM3	98	62.573	ENSCPBG00000027784	SRRM3	52	62.281	Chrysemys_picta_bellii
ENSLOCG00000002879	SRRM3	59	59.070	ENSEASG00005016840	-	87	53.550	Equus_asinus_asinus
ENSLOCG00000002879	SRRM3	59	59.070	ENSECAG00000022142	-	86	53.412	Equus_caballus
ENSLOCG00000002879	SRRM3	82	58.763	ENSFCAG00000044112	SRRM3	88	43.186	Felis_catus
ENSLOCG00000002879	SRRM3	61	66.512	ENSFALG00000009603	SRRM3	51	60.588	Ficedula_albicollis
ENSLOCG00000002879	SRRM3	83	63.699	ENSGALG00000001932	SRRM3	73	62.059	Gallus_gallus
ENSLOCG00000002879	SRRM3	99	56.742	ENSGAFG00000014777	SRRM3	53	55.899	Gambusia_affinis
ENSLOCG00000002879	SRRM3	98	61.696	ENSGAGG00000021058	SRRM3	56	61.696	Gopherus_agassizii
ENSLOCG00000002879	SRRM3	98	56.091	ENSHBUG00000005061	SRRM3	52	57.910	Haplochromis_burtoni
ENSLOCG00000002879	SRRM3	99	60.180	ENSIPUG00000012467	srrm3	52	60.299	Ictalurus_punctatus
ENSLOCG00000002879	SRRM3	59	60.465	ENSSTOG00000014181	SRRM3	89	75.439	Ictidomys_tridecemlineatus
ENSLOCG00000002879	SRRM3	82	51.890	ENSJJAG00000023441	Srrm3	78	57.547	Jaculus_jaculus
ENSLOCG00000002879	SRRM3	98	55.587	ENSKMAG00000013495	SRRM3	51	55.182	Kryptolebias_marmoratus
ENSLOCG00000002879	SRRM3	82	53.659	ENSLACG00000008008	SRRM3	51	53.497	Latimeria_chalumnae
ENSLOCG00000002879	SRRM3	70	66.008	ENSMGAG00000003690	SRRM3	84	60.423	Meleagris_gallopavo
ENSLOCG00000002879	SRRM3	53	65.556	ENSMODG00000029593	SRRM3	55	63.636	Monodelphis_domestica
ENSLOCG00000002879	SRRM3	98	59.026	ENSMALG00000000844	-	53	60.286	Monopterus_albus
ENSLOCG00000002879	SRRM3	98	53.026	MGP_CAROLIEiJ_G0027845	-	97	51.585	Mus_caroli
ENSLOCG00000002879	SRRM3	59	59.809	ENSODEG00000015988	SRRM3	88	43.564	Octodon_degus
ENSLOCG00000002879	SRRM3	98	44.606	ENSOANG00000004590	-	57	44.248	Ornithorhynchus_anatinus
ENSLOCG00000002879	SRRM3	98	56.322	ENSORLG00000026242	-	53	57.184	Oryzias_latipes
ENSLOCG00000002879	SRRM3	98	56.322	ENSORLG00020016592	-	53	57.184	Oryzias_latipes_hni
ENSLOCG00000002879	SRRM3	98	56.322	ENSORLG00015022712	SRRM3	53	57.184	Oryzias_latipes_hsok
ENSLOCG00000002879	SRRM3	98	56.322	ENSOMEG00000010768	-	53	56.695	Oryzias_melastigma
ENSLOCG00000002879	SRRM3	82	57.732	ENSPTRG00000019317	SRRM3	88	43.257	Pan_troglodytes
ENSLOCG00000002879	SRRM3	96	71.429	ENSPKIG00000017233	SRRM3	53	71.739	Paramormyrops_kingsleyae
ENSLOCG00000002879	SRRM3	98	55.491	ENSPSIG00000007850	SRRM3	54	58.772	Pelodiscus_sinensis
ENSLOCG00000002879	SRRM3	99	56.901	ENSPMEG00000011981	-	53	56.787	Poecilia_mexicana
ENSLOCG00000002879	SRRM3	99	57.746	ENSPREG00000008138	-	53	57.103	Poecilia_reticulata
ENSLOCG00000002879	SRRM3	82	56.701	ENSPCOG00000028464	SRRM3	88	44.059	Propithecus_coquereli
ENSLOCG00000002879	SRRM3	99	61.834	ENSPNAG00000009621	SRRM3	52	61.128	Pygocentrus_nattereri
ENSLOCG00000002879	SRRM3	95	71.293	ENSSFOG00015001696	SRRM3	97	54.786	Scleropages_formosus
ENSLOCG00000002879	SRRM3	98	58.357	ENSSMAG00000000476	SRRM3	53	59.040	Scophthalmus_maximus
ENSLOCG00000002879	SRRM3	98	58.127	ENSSLDG00000020070	SRRM3	52	58.424	Seriola_lalandi_dorsalis
ENSLOCG00000002879	SRRM3	66	81.373	ENSSPUG00000006285	SRRM3	71	81.373	Sphenodon_punctatus
ENSLOCG00000002879	SRRM3	99	56.461	ENSXMAG00000005663	-	53	55.618	Xiphophorus_maculatus