EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003085 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3432 bases
Position: chrLG21:4396857-4400288
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003630	PABP	PF00658.18	4.9e-24	1	2
ENSLOCP00000003630	PABP	PF00658.18	4.9e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003637	-	480	-	ENSLOCP00000003630	160 (aa)	-	W5M5H2

Gene Model

Click here to download ENSLOCG00000003085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003085	-	96	60.131	ENSAPOG00000023881	-	95	60.606	Acanthochromis_polyacanthus
ENSLOCG00000003085	-	96	60.784	ENSAOCG00000019884	-	95	61.364	Amphiprion_ocellaris
ENSLOCG00000003085	-	96	60.390	ENSAPEG00000020987	-	95	61.364	Amphiprion_percula
ENSLOCG00000003085	-	88	54.861	ENSATEG00000013831	-	94	59.848	Anabas_testudineus
ENSLOCG00000003085	-	98	58.333	ENSACLG00000027916	-	94	59.848	Astatotilapia_calliptera
ENSLOCG00000003085	-	98	53.165	ENSAMXG00000041484	-	90	56.154	Astyanax_mexicanus
ENSLOCG00000003085	-	99	58.228	ENSCSEG00000001317	-	72	61.654	Cynoglossus_semilaevis
ENSLOCG00000003085	-	99	56.962	ENSCVAG00000000578	-	92	59.091	Cyprinodon_variegatus
ENSLOCG00000003085	-	92	58.993	ENSELUG00000001731	-	77	59.542	Esox_lucius
ENSLOCG00000003085	-	99	56.962	ENSFHEG00000007741	-	94	59.848	Fundulus_heteroclitus
ENSLOCG00000003085	-	99	49.612	ENSGAFG00000012983	-	68	61.905	Gambusia_affinis
ENSLOCG00000003085	-	96	55.844	ENSHBUG00000000185	-	54	57.576	Haplochromis_burtoni
ENSLOCG00000003085	-	96	55.128	ENSHCOG00000003117	-	94	59.701	Hippocampus_comes
ENSLOCG00000003085	-	93	57.718	ENSKMAG00000011397	-	95	59.848	Kryptolebias_marmoratus
ENSLOCG00000003085	-	98	57.692	ENSLBEG00000027847	-	91	61.364	Labrus_bergylta
ENSLOCG00000003085	-	88	61.702	ENSMAMG00000017628	-	95	62.121	Mastacembelus_armatus
ENSLOCG00000003085	-	93	59.633	ENSMMOG00000004490	-	91	59.633	Mola_mola
ENSLOCG00000003085	-	88	59.286	ENSMALG00000004586	-	95	60.606	Monopterus_albus
ENSLOCG00000003085	-	93	56.452	ENSNBRG00000006752	-	72	57.658	Neolamprologus_brichardi
ENSLOCG00000003085	-	95	63.265	ENSPKIG00000005307	-	87	67.424	Paramormyrops_kingsleyae
ENSLOCG00000003085	-	86	54.630	ENSPMGG00000004590	-	96	55.140	Periophthalmus_magnuspinnatus
ENSLOCG00000003085	-	99	56.962	ENSPFOG00000023453	-	92	59.091	Poecilia_formosa
ENSLOCG00000003085	-	99	56.962	ENSPLAG00000003198	-	92	59.091	Poecilia_latipinna
ENSLOCG00000003085	-	90	57.798	ENSPMEG00000022008	-	64	57.798	Poecilia_mexicana
ENSLOCG00000003085	-	83	60.606	ENSPREG00000001981	-	90	60.976	Poecilia_reticulata
ENSLOCG00000003085	-	93	55.645	ENSPNYG00000004740	-	87	56.757	Pundamilia_nyererei
ENSLOCG00000003085	-	99	62.658	ENSSFOG00015001322	-	89	64.179	Scleropages_formosus
ENSLOCG00000003085	-	88	58.865	ENSSMAG00000008778	-	94	58.647	Scophthalmus_maximus
ENSLOCG00000003085	-	89	59.155	ENSSDUG00000015116	-	94	60.150	Seriola_dumerili
ENSLOCG00000003085	-	89	57.746	ENSSLDG00000000425	-	94	58.647	Seriola_lalandi_dorsalis
ENSLOCG00000003085	-	99	60.127	ENSSPAG00000015141	-	95	61.364	Stegastes_partitus
ENSLOCG00000003085	-	99	56.250	ENSTRUG00000021899	-	95	58.647	Takifugu_rubripes
ENSLOCG00000003085	-	98	56.051	ENSTNIG00000002576	-	95	58.015	Tetraodon_nigroviridis
ENSLOCG00000003085	-	86	57.246	ENSXCOG00000001548	-	65	57.364	Xiphophorus_couchianus
ENSLOCG00000003085	-	99	57.595	ENSXMAG00000021863	-	87	59.848	Xiphophorus_maculatus