EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003093 (Gene tree)
Gene ID: 102689961
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 14139 bases
Position: chrLG26:3663702-3677840
Accession: 102689961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003654	HARE-HTH	PF05066.13	8.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003661	-	2126	XM_006642234	ENSLOCP00000003654	553 (aa)	XP_006642297	W5M5J6

Gene Model

Click here to download ENSLOCG00000003093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003093	tbrg1	98	73.675	ENSAPOG00000017352	tbrg1	99	74.406	Acanthochromis_polyacanthus
ENSLOCG00000003093	tbrg1	90	76.096	ENSACIG00000021274	tbrg1	94	76.693	Amphilophus_citrinellus
ENSLOCG00000003093	tbrg1	98	73.309	ENSAOCG00000018605	tbrg1	99	74.040	Amphiprion_ocellaris
ENSLOCG00000003093	tbrg1	98	73.309	ENSAPEG00000022443	tbrg1	99	74.040	Amphiprion_percula
ENSLOCG00000003093	tbrg1	99	73.636	ENSATEG00000023537	tbrg1	99	73.492	Anabas_testudineus
ENSLOCG00000003093	tbrg1	99	74.141	ENSACLG00000000281	tbrg1	100	74.639	Astatotilapia_calliptera
ENSLOCG00000003093	tbrg1	99	74.460	ENSAMXG00000008381	tbrg1	99	74.460	Astyanax_mexicanus
ENSLOCG00000003093	tbrg1	98	72.029	ENSCSEG00000002445	tbrg1	99	72.943	Cynoglossus_semilaevis
ENSLOCG00000003093	tbrg1	99	69.120	ENSCVAG00000019626	tbrg1	100	68.972	Cyprinodon_variegatus
ENSLOCG00000003093	tbrg1	99	71.558	ENSDARG00000074996	tbrg1	99	72.989	Danio_rerio
ENSLOCG00000003093	tbrg1	90	49.414	ENSEBUG00000014060	tbrg1	90	49.689	Eptatretus_burgeri
ENSLOCG00000003093	tbrg1	99	77.899	ENSELUG00000017458	tbrg1	99	77.899	Esox_lucius
ENSLOCG00000003093	tbrg1	86	67.886	ENSFHEG00000004283	tbrg1	92	67.480	Fundulus_heteroclitus
ENSLOCG00000003093	tbrg1	99	70.609	ENSGAFG00000000204	tbrg1	100	68.959	Gambusia_affinis
ENSLOCG00000003093	tbrg1	99	74.141	ENSHBUG00000004935	tbrg1	100	74.141	Haplochromis_burtoni
ENSLOCG00000003093	tbrg1	91	71.456	ENSHCOG00000010588	tbrg1	94	71.456	Hippocampus_comes
ENSLOCG00000003093	tbrg1	96	74.212	ENSIPUG00000008697	tbrg1	98	74.632	Ictalurus_punctatus
ENSLOCG00000003093	tbrg1	95	73.535	ENSKMAG00000002775	tbrg1	100	72.022	Kryptolebias_marmoratus
ENSLOCG00000003093	tbrg1	98	72.628	ENSLBEG00000017559	tbrg1	98	72.037	Labrus_bergylta
ENSLOCG00000003093	tbrg1	98	74.954	ENSMAMG00000000876	tbrg1	99	75.320	Mastacembelus_armatus
ENSLOCG00000003093	tbrg1	100	74.281	ENSMZEG00005013545	tbrg1	92	74.141	Maylandia_zebra
ENSLOCG00000003093	tbrg1	90	74.096	ENSMMOG00000005314	tbrg1	91	74.699	Mola_mola
ENSLOCG00000003093	tbrg1	92	76.953	ENSMALG00000011630	tbrg1	99	76.953	Monopterus_albus
ENSLOCG00000003093	tbrg1	90	78.715	ENSNBRG00000017490	tbrg1	94	78.715	Neolamprologus_brichardi
ENSLOCG00000003093	tbrg1	99	74.322	ENSONIG00000005284	tbrg1	100	74.322	Oreochromis_niloticus
ENSLOCG00000003093	tbrg1	99	70.524	ENSORLG00000014519	tbrg1	100	70.524	Oryzias_latipes
ENSLOCG00000003093	tbrg1	99	70.163	ENSORLG00020009567	tbrg1	100	70.163	Oryzias_latipes_hni
ENSLOCG00000003093	tbrg1	99	70.163	ENSORLG00015000448	tbrg1	100	70.163	Oryzias_latipes_hsok
ENSLOCG00000003093	tbrg1	98	71.455	ENSOMEG00000006130	tbrg1	99	71.747	Oryzias_melastigma
ENSLOCG00000003093	tbrg1	93	79.297	ENSPKIG00000012274	tbrg1	89	79.297	Paramormyrops_kingsleyae
ENSLOCG00000003093	tbrg1	98	71.739	ENSPMGG00000015968	tbrg1	99	71.920	Periophthalmus_magnuspinnatus
ENSLOCG00000003093	tbrg1	93	73.040	ENSPFOG00000004279	tbrg1	100	70.160	Poecilia_formosa
ENSLOCG00000003093	tbrg1	93	72.849	ENSPLAG00000001227	tbrg1	100	69.805	Poecilia_latipinna
ENSLOCG00000003093	tbrg1	93	73.040	ENSPMEG00000000955	tbrg1	100	70.968	Poecilia_mexicana
ENSLOCG00000003093	tbrg1	93	73.180	ENSPREG00000005246	tbrg1	100	70.557	Poecilia_reticulata
ENSLOCG00000003093	tbrg1	87	74.639	ENSPNYG00000012625	tbrg1	100	74.639	Pundamilia_nyererei
ENSLOCG00000003093	tbrg1	98	74.589	ENSPNAG00000028332	tbrg1	99	74.954	Pygocentrus_nattereri
ENSLOCG00000003093	tbrg1	91	80.357	ENSSFOG00015009308	tbrg1	99	72.128	Scleropages_formosus
ENSLOCG00000003093	tbrg1	99	71.688	ENSSMAG00000002529	tbrg1	97	74.219	Scophthalmus_maximus
ENSLOCG00000003093	tbrg1	98	74.771	ENSSDUG00000013674	tbrg1	99	74.771	Seriola_dumerili
ENSLOCG00000003093	tbrg1	90	78.063	ENSSLDG00000008932	tbrg1	97	78.063	Seriola_lalandi_dorsalis
ENSLOCG00000003093	tbrg1	84	76.282	ENSSPAG00000004808	tbrg1	99	76.282	Stegastes_partitus
ENSLOCG00000003093	tbrg1	93	70.543	ENSTRUG00000005960	tbrg1	97	70.955	Takifugu_rubripes
ENSLOCG00000003093	tbrg1	99	70.736	ENSXMAG00000001551	tbrg1	100	69.489	Xiphophorus_maculatus