EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000003134 (Gene tree)
Gene ID: 102697257
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 17782 bases
Position: chrLG18:6665267-6683048
Accession: 102697257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003701	dsrm	PF00035.26	8.4e-48	1	4
ENSLOCP00000003701	dsrm	PF00035.26	8.4e-48	2	4
ENSLOCP00000003701	dsrm	PF00035.26	8.4e-48	3	4
ENSLOCP00000003701	dsrm	PF00035.26	8.4e-48	4	4
ENSLOCP00000003720	dsrm	PF00035.26	8.6e-48	1	4
ENSLOCP00000003720	dsrm	PF00035.26	8.6e-48	2	4
ENSLOCP00000003720	dsrm	PF00035.26	8.6e-48	3	4
ENSLOCP00000003720	dsrm	PF00035.26	8.6e-48	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003708	-	2417	-	ENSLOCP00000003701	694 (aa)	-	W5M5P3
ENSLOCT00000003727	-	2414	XM_006639499	ENSLOCP00000003720	690 (aa)	XP_006639562	W5M5R2

Gene Model

Click here to download ENSLOCG00000003134's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003134's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000003134	stau1	92	40.937	ENSLOCG00000003717	stau2	99	41.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003134	stau1	96	77.570	ENSG00000124214	STAU1	99	80.080	Homo_sapiens
ENSLOCG00000003134	stau1	100	77.986	ENSAPOG00000017260	stau1	99	77.666	Acanthochromis_polyacanthus
ENSLOCG00000003134	stau1	99	74.212	ENSAMEG00000013681	STAU1	99	74.319	Ailuropoda_melanoleuca
ENSLOCG00000003134	stau1	100	77.424	ENSACIG00000015918	stau1	99	77.536	Amphilophus_citrinellus
ENSLOCG00000003134	stau1	100	79.424	ENSAOCG00000012224	stau1	99	78.818	Amphiprion_ocellaris
ENSLOCG00000003134	stau1	100	79.424	ENSAPEG00000012308	stau1	99	78.818	Amphiprion_percula
ENSLOCG00000003134	stau1	100	79.167	ENSATEG00000024600	stau1	99	78.711	Anabas_testudineus
ENSLOCG00000003134	stau1	100	77.127	ENSAPLG00000010527	STAU1	100	77.095	Anas_platyrhynchos
ENSLOCG00000003134	stau1	100	78.143	ENSACAG00000015909	STAU1	99	78.143	Anolis_carolinensis
ENSLOCG00000003134	stau1	96	76.340	ENSANAG00000032714	STAU1	99	77.154	Aotus_nancymaae
ENSLOCG00000003134	stau1	100	78.448	ENSACLG00000012270	stau1	99	77.842	Astatotilapia_calliptera
ENSLOCG00000003134	stau1	85	81.460	ENSAMXG00000016812	stau1	99	80.473	Astyanax_mexicanus
ENSLOCG00000003134	stau1	96	76.822	ENSBTAG00000000241	STAU1	99	79.070	Bos_taurus
ENSLOCG00000003134	stau1	96	77.196	ENSCJAG00000016233	STAU1	99	78.030	Callithrix_jacchus
ENSLOCG00000003134	stau1	96	77.009	ENSCAFG00000011347	STAU1	99	76.219	Canis_familiaris
ENSLOCG00000003134	stau1	96	76.106	ENSCAFG00020017123	STAU1	99	78.878	Canis_lupus_dingo
ENSLOCG00000003134	stau1	96	76.636	ENSCHIG00000001799	-	99	77.462	Capra_hircus
ENSLOCG00000003134	stau1	96	78.876	ENSTSYG00000036179	-	99	78.876	Carlito_syrichta
ENSLOCG00000003134	stau1	72	77.465	ENSCAPG00000017041	STAU1	99	77.465	Cavia_aperea
ENSLOCG00000003134	stau1	71	75.000	ENSCPOG00000005566	STAU1	99	75.000	Cavia_porcellus
ENSLOCG00000003134	stau1	96	76.525	ENSCCAG00000034339	STAU1	99	77.341	Cebus_capucinus
ENSLOCG00000003134	stau1	96	79.167	ENSCATG00000028474	STAU1	99	81.579	Cercocebus_atys
ENSLOCG00000003134	stau1	71	64.372	ENSCLAG00000002784	-	99	64.097	Chinchilla_lanigera
ENSLOCG00000003134	stau1	71	78.629	ENSCLAG00000006516	-	99	78.629	Chinchilla_lanigera
ENSLOCG00000003134	stau1	72	80.080	ENSCSAG00000014986	STAU1	99	80.080	Chlorocebus_sabaeus
ENSLOCG00000003134	stau1	96	77.985	ENSCHOG00000001511	STAU1	99	78.828	Choloepus_hoffmanni
ENSLOCG00000003134	stau1	100	78.977	ENSCPBG00000026741	STAU1	100	79.119	Chrysemys_picta_bellii
ENSLOCG00000003134	stau1	96	77.570	ENSCANG00000039220	STAU1	99	78.409	Colobus_angolensis_palliatus
ENSLOCG00000003134	stau1	71	73.790	ENSCGRG00001013453	Stau1	99	73.790	Cricetulus_griseus_chok1gshd
ENSLOCG00000003134	stau1	71	73.790	ENSCGRG00000007216	Stau1	99	73.790	Cricetulus_griseus_crigri
ENSLOCG00000003134	stau1	99	69.263	ENSCSEG00000000792	stau1	99	69.405	Cynoglossus_semilaevis
ENSLOCG00000003134	stau1	96	72.414	ENSCVAG00000005906	stau1	99	76.832	Cyprinodon_variegatus
ENSLOCG00000003134	stau1	100	78.879	ENSDARG00000044182	stau1	100	79.560	Danio_rerio
ENSLOCG00000003134	stau1	96	77.799	ENSDNOG00000014933	STAU1	97	78.639	Dasypus_novemcinctus
ENSLOCG00000003134	stau1	71	77.755	ENSDORG00000030220	Stau1	99	77.755	Dipodomys_ordii
ENSLOCG00000003134	stau1	91	80.132	ENSETEG00000018235	STAU1	88	80.132	Echinops_telfairi
ENSLOCG00000003134	stau1	96	76.340	ENSEASG00005023343	STAU1	100	76.183	Equus_asinus_asinus
ENSLOCG00000003134	stau1	96	77.383	ENSECAG00000012894	STAU1	99	78.220	Equus_caballus
ENSLOCG00000003134	stau1	74	82.234	ENSEEUG00000014344	STAU1	80	82.234	Erinaceus_europaeus
ENSLOCG00000003134	stau1	99	77.840	ENSELUG00000002529	stau1	99	79.875	Esox_lucius
ENSLOCG00000003134	stau1	96	77.570	ENSFCAG00000001447	STAU1	99	78.409	Felis_catus
ENSLOCG00000003134	stau1	100	79.137	ENSFALG00000012940	STAU1	100	79.107	Ficedula_albicollis
ENSLOCG00000003134	stau1	71	78.427	ENSFDAG00000014119	-	99	78.427	Fukomys_damarensis
ENSLOCG00000003134	stau1	72	61.290	ENSFDAG00000020837	-	99	61.290	Fukomys_damarensis
ENSLOCG00000003134	stau1	100	77.155	ENSFHEG00000013517	stau1	99	77.909	Fundulus_heteroclitus
ENSLOCG00000003134	stau1	100	67.782	ENSGMOG00000016850	stau1	100	66.992	Gadus_morhua
ENSLOCG00000003134	stau1	100	79.856	ENSGALG00000004736	STAU1	100	79.827	Gallus_gallus
ENSLOCG00000003134	stau1	100	76.437	ENSGAFG00000010437	stau1	100	75.862	Gambusia_affinis
ENSLOCG00000003134	stau1	100	77.874	ENSGACG00000001352	stau1	99	76.978	Gasterosteus_aculeatus
ENSLOCG00000003134	stau1	100	79.656	ENSGAGG00000009825	STAU1	100	79.799	Gopherus_agassizii
ENSLOCG00000003134	stau1	96	71.691	ENSGGOG00000025351	STAU1	99	82.692	Gorilla_gorilla
ENSLOCG00000003134	stau1	100	78.448	ENSHBUG00000023668	stau1	99	77.842	Haplochromis_burtoni
ENSLOCG00000003134	stau1	71	79.388	ENSHGLG00000008730	STAU1	99	79.388	Heterocephalus_glaber_female
ENSLOCG00000003134	stau1	71	79.388	ENSHGLG00100000098	STAU1	99	79.388	Heterocephalus_glaber_male
ENSLOCG00000003134	stau1	96	74.850	ENSHCOG00000018461	stau1	99	72.374	Hippocampus_comes
ENSLOCG00000003134	stau1	99	75.797	ENSIPUG00000023725	stau1	99	74.928	Ictalurus_punctatus
ENSLOCG00000003134	stau1	71	78.163	ENSSTOG00000003634	STAU1	99	78.163	Ictidomys_tridecemlineatus
ENSLOCG00000003134	stau1	71	77.143	ENSJJAG00000020032	Stau1	99	77.143	Jaculus_jaculus
ENSLOCG00000003134	stau1	99	76.190	ENSKMAG00000007135	stau1	99	76.046	Kryptolebias_marmoratus
ENSLOCG00000003134	stau1	100	77.842	ENSLBEG00000020172	stau1	99	77.089	Labrus_bergylta
ENSLOCG00000003134	stau1	98	78.161	ENSLACG00000016157	STAU1	97	76.868	Latimeria_chalumnae
ENSLOCG00000003134	stau1	73	80.588	ENSLAFG00000003238	STAU1	99	80.588	Loxodonta_africana
ENSLOCG00000003134	stau1	96	79.167	ENSMFAG00000040931	STAU1	99	81.852	Macaca_fascicularis
ENSLOCG00000003134	stau1	96	71.875	ENSMMUG00000002302	STAU1	99	81.852	Macaca_mulatta
ENSLOCG00000003134	stau1	96	78.189	ENSMNEG00000033821	STAU1	99	80.519	Macaca_nemestrina
ENSLOCG00000003134	stau1	96	77.196	ENSMLEG00000031383	STAU1	99	78.030	Mandrillus_leucophaeus
ENSLOCG00000003134	stau1	100	78.993	ENSMAMG00000017586	stau1	99	78.529	Mastacembelus_armatus
ENSLOCG00000003134	stau1	100	78.561	ENSMZEG00005015605	stau1	99	77.954	Maylandia_zebra
ENSLOCG00000003134	stau1	100	77.266	ENSMGAG00000004719	STAU1	100	77.235	Meleagris_gallopavo
ENSLOCG00000003134	stau1	71	73.992	ENSMAUG00000013846	Stau1	99	73.992	Mesocricetus_auratus
ENSLOCG00000003134	stau1	96	75.046	ENSMICG00000001995	STAU1	99	75.843	Microcebus_murinus
ENSLOCG00000003134	stau1	71	74.798	ENSMOCG00000018743	Stau1	99	74.798	Microtus_ochrogaster
ENSLOCG00000003134	stau1	96	77.313	ENSMMOG00000015455	stau1	99	78.990	Mola_mola
ENSLOCG00000003134	stau1	96	77.860	ENSMODG00000016276	STAU1	99	77.860	Monodelphis_domestica
ENSLOCG00000003134	stau1	99	78.963	ENSMALG00000000045	stau1	99	78.242	Monopterus_albus
ENSLOCG00000003134	stau1	71	75.102	MGP_CAROLIEiJ_G0024699	Stau1	100	75.154	Mus_caroli
ENSLOCG00000003134	stau1	71	74.694	ENSMUSG00000039536	Stau1	100	74.743	Mus_musculus
ENSLOCG00000003134	stau1	71	74.694	MGP_PahariEiJ_G0026141	Stau1	99	74.694	Mus_pahari
ENSLOCG00000003134	stau1	71	74.694	MGP_SPRETEiJ_G0025619	Stau1	100	74.743	Mus_spretus
ENSLOCG00000003134	stau1	96	76.532	ENSMPUG00000017581	STAU1	99	76.647	Mustela_putorius_furo
ENSLOCG00000003134	stau1	96	76.636	ENSMLUG00000008407	STAU1	97	77.462	Myotis_lucifugus
ENSLOCG00000003134	stau1	71	77.218	ENSNGAG00000007108	Stau1	99	77.218	Nannospalax_galili
ENSLOCG00000003134	stau1	100	78.448	ENSNBRG00000017596	stau1	99	77.842	Neolamprologus_brichardi
ENSLOCG00000003134	stau1	96	77.196	ENSNLEG00000006955	STAU1	99	78.728	Nomascus_leucogenys
ENSLOCG00000003134	stau1	76	82.073	ENSMEUG00000003263	STAU1	91	82.237	Notamacropus_eugenii
ENSLOCG00000003134	stau1	96	74.440	ENSOPRG00000014569	STAU1	89	77.407	Ochotona_princeps
ENSLOCG00000003134	stau1	72	79.074	ENSODEG00000006523	STAU1	99	79.276	Octodon_degus
ENSLOCG00000003134	stau1	100	75.978	ENSONIG00000004152	stau1	98	75.385	Oreochromis_niloticus
ENSLOCG00000003134	stau1	99	76.245	ENSOANG00000006394	STAU1	100	75.921	Ornithorhynchus_anatinus
ENSLOCG00000003134	stau1	96	75.000	ENSOCUG00000006214	STAU1	99	78.039	Oryctolagus_cuniculus
ENSLOCG00000003134	stau1	100	75.575	ENSOMEG00000002388	stau1	100	74.569	Oryzias_melastigma
ENSLOCG00000003134	stau1	71	55.040	ENSOGAG00000028222	-	99	55.040	Otolemur_garnettii
ENSLOCG00000003134	stau1	96	77.589	ENSOGAG00000002127	STAU1	97	78.030	Otolemur_garnettii
ENSLOCG00000003134	stau1	96	76.636	ENSOARG00000012204	STAU1	99	76.453	Ovis_aries
ENSLOCG00000003134	stau1	96	71.875	ENSPPAG00000032023	STAU1	99	82.692	Pan_paniscus
ENSLOCG00000003134	stau1	96	77.383	ENSPPRG00000003436	STAU1	99	80.080	Panthera_pardus
ENSLOCG00000003134	stau1	96	77.383	ENSPTIG00000011768	STAU1	99	78.968	Panthera_tigris_altaica
ENSLOCG00000003134	stau1	96	71.875	ENSPTRG00000023130	STAU1	99	82.692	Pan_troglodytes
ENSLOCG00000003134	stau1	96	79.167	ENSPANG00000020560	STAU1	99	81.579	Papio_anubis
ENSLOCG00000003134	stau1	99	82.734	ENSPKIG00000024588	stau1	99	82.734	Paramormyrops_kingsleyae
ENSLOCG00000003134	stau1	100	79.943	ENSPSIG00000010731	STAU1	99	80.000	Pelodiscus_sinensis
ENSLOCG00000003134	stau1	100	75.862	ENSPMGG00000018553	stau1	99	77.236	Periophthalmus_magnuspinnatus
ENSLOCG00000003134	stau1	71	74.194	ENSPEMG00000022045	Stau1	99	74.194	Peromyscus_maniculatus_bairdii
ENSLOCG00000003134	stau1	99	75.892	ENSPCIG00000023269	STAU1	100	77.961	Phascolarctos_cinereus
ENSLOCG00000003134	stau1	100	76.327	ENSPFOG00000017253	stau1	100	75.323	Poecilia_formosa
ENSLOCG00000003134	stau1	57	80.101	ENSPLAG00000014829	stau1	97	74.419	Poecilia_latipinna
ENSLOCG00000003134	stau1	100	73.027	ENSPMEG00000007495	stau1	100	72.023	Poecilia_mexicana
ENSLOCG00000003134	stau1	100	75.897	ENSPREG00000003477	stau1	100	74.892	Poecilia_reticulata
ENSLOCG00000003134	stau1	96	76.592	ENSPPYG00000011111	STAU1	99	77.419	Pongo_abelii
ENSLOCG00000003134	stau1	91	71.571	ENSPCAG00000002459	STAU1	100	72.379	Procavia_capensis
ENSLOCG00000003134	stau1	96	76.075	ENSPCOG00000027746	STAU1	99	77.535	Propithecus_coquereli
ENSLOCG00000003134	stau1	84	81.457	ENSPVAG00000015019	STAU1	86	81.457	Pteropus_vampyrus
ENSLOCG00000003134	stau1	100	78.448	ENSPNYG00000014436	stau1	99	77.842	Pundamilia_nyererei
ENSLOCG00000003134	stau1	99	77.762	ENSPNAG00000011323	stau1	99	77.618	Pygocentrus_nattereri
ENSLOCG00000003134	stau1	71	74.194	ENSRNOG00000007781	Stau1	99	74.194	Rattus_norvegicus
ENSLOCG00000003134	stau1	72	78.926	ENSRBIG00000037345	STAU1	100	79.317	Rhinopithecus_bieti
ENSLOCG00000003134	stau1	96	79.873	ENSRROG00000039008	STAU1	99	80.519	Rhinopithecus_roxellana
ENSLOCG00000003134	stau1	96	76.525	ENSSBOG00000034448	STAU1	99	77.867	Saimiri_boliviensis_boliviensis
ENSLOCG00000003134	stau1	96	78.009	ENSSHAG00000009492	STAU1	99	78.009	Sarcophilus_harrisii
ENSLOCG00000003134	stau1	99	83.792	ENSSFOG00015021497	stau1	99	83.792	Scleropages_formosus
ENSLOCG00000003134	stau1	100	78.273	ENSSMAG00000017410	stau1	99	77.666	Scophthalmus_maximus
ENSLOCG00000003134	stau1	100	78.993	ENSSDUG00000019439	stau1	99	78.386	Seriola_dumerili
ENSLOCG00000003134	stau1	100	78.993	ENSSLDG00000025040	stau1	99	78.674	Seriola_lalandi_dorsalis
ENSLOCG00000003134	stau1	60	79.528	ENSSARG00000010389	-	63	79.528	Sorex_araneus
ENSLOCG00000003134	stau1	100	78.977	ENSSPUG00000017983	STAU1	100	78.909	Sphenodon_punctatus
ENSLOCG00000003134	stau1	100	78.993	ENSSPAG00000019275	stau1	99	78.674	Stegastes_partitus
ENSLOCG00000003134	stau1	96	77.196	ENSSSCG00000027444	STAU1	99	79.833	Sus_scrofa
ENSLOCG00000003134	stau1	100	76.356	ENSTGUG00000008784	STAU1	100	76.323	Taeniopygia_guttata
ENSLOCG00000003134	stau1	96	78.861	ENSTRUG00000005837	stau1	99	77.135	Takifugu_rubripes
ENSLOCG00000003134	stau1	96	77.313	ENSTNIG00000014732	stau1	99	76.418	Tetraodon_nigroviridis
ENSLOCG00000003134	stau1	89	75.064	ENSTBEG00000009404	STAU1	99	66.731	Tupaia_belangeri
ENSLOCG00000003134	stau1	76	77.970	ENSTTRG00000004285	STAU1	91	78.070	Tursiops_truncatus
ENSLOCG00000003134	stau1	72	77.535	ENSUAMG00000025449	STAU1	99	77.535	Ursus_americanus
ENSLOCG00000003134	stau1	54	73.615	ENSUMAG00000024475	STAU1	89	73.615	Ursus_maritimus
ENSLOCG00000003134	stau1	96	77.570	ENSVPAG00000001313	STAU1	99	78.409	Vicugna_pacos
ENSLOCG00000003134	stau1	96	76.106	ENSVVUG00000022325	STAU1	99	76.219	Vulpes_vulpes
ENSLOCG00000003134	stau1	100	75.966	ENSXETG00000001783	stau1	99	75.680	Xenopus_tropicalis
ENSLOCG00000003134	stau1	53	79.189	ENSXCOG00000008804	stau1	94	79.189	Xiphophorus_couchianus
ENSLOCG00000003134	stau1	100	75.862	ENSXMAG00000016175	stau1	100	75.144	Xiphophorus_maculatus