EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003219 (Gene tree)
Gene ID: 102689142
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 62890 bases
Position: chrLG20:4283896-4346785
Accession: 102689142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003803	SRRM_C	PF15230.6	1.6e-25	1	1
ENSLOCP00000003824	SRRM_C	PF15230.6	2.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003810	-	4732	XM_006640309	ENSLOCP00000003803	614 (aa)	XP_015221878	W5M5Z5
ENSLOCT00000003831	-	4717	-	ENSLOCP00000003824	609 (aa)	-	W5M616

Gene Model

Click here to download ENSLOCG00000003219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003219	srrm4	50	57.732	ENSCSEG00000007689	-	55	84.375	Cynoglossus_semilaevis
ENSLOCG00000003219	srrm4	58	49.722	ENSDARG00000086327	srrm4	59	45.777	Danio_rerio
ENSLOCG00000003219	srrm4	56	49.275	ENSMALG00000001422	srrm4	60	48.997	Monopterus_albus
ENSLOCG00000003219	srrm4	59	65.934	ENSONIG00000010552	srrm4	59	90.625	Oreochromis_niloticus