EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000003238 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-89b17.4
Alias: fj14g06|fj60g01|fk87f09|wu:fj14g06|wu:fj60g01|wu:fk87f09
Full Name: zinc finger protein 646-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 7481 bases
Position: chrLG5:3885645-3893125
Accession: 102687954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003823	zf-C2H2	PF00096.26	9.9e-45	1	5
ENSLOCP00000003823	zf-C2H2	PF00096.26	9.9e-45	2	5
ENSLOCP00000003823	zf-C2H2	PF00096.26	9.9e-45	3	5
ENSLOCP00000003823	zf-C2H2	PF00096.26	9.9e-45	4	5
ENSLOCP00000003823	zf-C2H2	PF00096.26	9.9e-45	5	5
ENSLOCP00000003823	zf-met	PF12874.7	1.2e-10	1	3
ENSLOCP00000003823	zf-met	PF12874.7	1.2e-10	2	3
ENSLOCP00000003823	zf-met	PF12874.7	1.2e-10	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003830	-	2772	XM_006630227	ENSLOCP00000003823	924 (aa)	XP_006630290	W5M615

Gene Model

Click here to download ENSLOCG00000003238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000003238	si:dkey-89b17.4	96	36.145	ENSLOCG00000014366	-	100	35.714
ENSLOCG00000003238	si:dkey-89b17.4	53	31.818	ENSLOCG00000017736	znf648	58	32.000
ENSLOCG00000003238	si:dkey-89b17.4	99	37.313	ENSLOCG00000004208	-	99	33.529
ENSLOCG00000003238	si:dkey-89b17.4	61	41.429	ENSLOCG00000017422	-	69	41.429
ENSLOCG00000003238	si:dkey-89b17.4	100	32.143	ENSLOCG00000003926	znf236	66	32.500
ENSLOCG00000003238	si:dkey-89b17.4	86	35.556	ENSLOCG00000009974	zbtb49	57	33.333
ENSLOCG00000003238	si:dkey-89b17.4	78	35.821	ENSLOCG00000014210	-	51	35.821
ENSLOCG00000003238	si:dkey-89b17.4	92	43.750	ENSLOCG00000000714	-	88	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003238	si:dkey-89b17.4	99	38.418	ENSAPOG00000020151	znf646	99	39.664	Acanthochromis_polyacanthus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSAPOG00000018015	si:dkey-89b17.4	96	46.774	Acanthochromis_polyacanthus
ENSLOCG00000003238	si:dkey-89b17.4	99	45.291	ENSACIG00000023049	znf646	99	56.452	Amphilophus_citrinellus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSACIG00000001025	si:dkey-89b17.4	96	46.774	Amphilophus_citrinellus
ENSLOCG00000003238	si:dkey-89b17.4	99	38.831	ENSAOCG00000012062	znf646	99	38.577	Amphiprion_ocellaris
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSAOCG00000018684	si:dkey-89b17.4	96	46.774	Amphiprion_ocellaris
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSAPEG00000007719	si:dkey-89b17.4	96	46.774	Amphiprion_percula
ENSLOCG00000003238	si:dkey-89b17.4	99	38.527	ENSAPEG00000006427	znf646	99	38.274	Amphiprion_percula
ENSLOCG00000003238	si:dkey-89b17.4	99	38.852	ENSATEG00000015206	znf646	99	39.400	Anabas_testudineus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSATEG00000016814	si:dkey-89b17.4	96	46.774	Anabas_testudineus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSACLG00000016017	si:dkey-89b17.4	96	46.774	Astatotilapia_calliptera
ENSLOCG00000003238	si:dkey-89b17.4	99	40.188	ENSACLG00000012712	znf646	99	40.038	Astatotilapia_calliptera
ENSLOCG00000003238	si:dkey-89b17.4	99	41.479	ENSAMXG00000035525	znf646	99	41.554	Astyanax_mexicanus
ENSLOCG00000003238	si:dkey-89b17.4	99	40.075	ENSAMXG00000001155	si:dkey-89b17.4	96	39.680	Astyanax_mexicanus
ENSLOCG00000003238	si:dkey-89b17.4	99	40.896	ENSCSEG00000012389	znf646	98	40.395	Cynoglossus_semilaevis
ENSLOCG00000003238	si:dkey-89b17.4	99	39.229	ENSCSEG00000010769	si:dkey-89b17.4	99	38.492	Cynoglossus_semilaevis
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSCVAG00000012420	si:dkey-89b17.4	96	46.774	Cyprinodon_variegatus
ENSLOCG00000003238	si:dkey-89b17.4	99	40.993	ENSDARG00000061424	znf646	98	41.085	Danio_rerio
ENSLOCG00000003238	si:dkey-89b17.4	99	50.794	ENSDARG00000075545	si:dkey-89b17.4	96	51.613	Danio_rerio
ENSLOCG00000003238	si:dkey-89b17.4	99	44.813	ENSELUG00000015516	si:dkey-89b17.4	97	48.387	Esox_lucius
ENSLOCG00000003238	si:dkey-89b17.4	99	42.435	ENSELUG00000010423	znf646	99	42.363	Esox_lucius
ENSLOCG00000003238	si:dkey-89b17.4	97	40.226	ENSFHEG00000000561	znf646	99	39.485	Fundulus_heteroclitus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSFHEG00000019457	si:dkey-89b17.4	96	46.774	Fundulus_heteroclitus
ENSLOCG00000003238	si:dkey-89b17.4	99	45.930	ENSGMOG00000016554	znf646	99	45.930	Gadus_morhua
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSGAFG00000000345	si:dkey-89b17.4	96	46.774	Gambusia_affinis
ENSLOCG00000003238	si:dkey-89b17.4	62	55.556	ENSGAFG00000016353	-	71	55.556	Gambusia_affinis
ENSLOCG00000003238	si:dkey-89b17.4	99	47.872	ENSGACG00000008733	znf646	99	45.349	Gasterosteus_aculeatus
ENSLOCG00000003238	si:dkey-89b17.4	99	48.000	ENSGACG00000014714	si:dkey-89b17.4	100	48.000	Gasterosteus_aculeatus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSHBUG00000013093	si:dkey-89b17.4	96	46.774	Haplochromis_burtoni
ENSLOCG00000003238	si:dkey-89b17.4	99	43.411	ENSHBUG00000004840	znf646	99	43.411	Haplochromis_burtoni
ENSLOCG00000003238	si:dkey-89b17.4	99	41.171	ENSHCOG00000014890	znf646	99	41.692	Hippocampus_comes
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSHCOG00000001901	si:dkey-89b17.4	96	46.774	Hippocampus_comes
ENSLOCG00000003238	si:dkey-89b17.4	99	56.140	ENSIPUG00000012845	si:dkey-89b17.4	98	56.140	Ictalurus_punctatus
ENSLOCG00000003238	si:dkey-89b17.4	99	42.013	ENSIPUG00000018102	znf646	99	42.037	Ictalurus_punctatus
ENSLOCG00000003238	si:dkey-89b17.4	99	39.517	ENSKMAG00000011982	znf646	100	39.400	Kryptolebias_marmoratus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSKMAG00000014037	si:dkey-89b17.4	96	46.774	Kryptolebias_marmoratus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSLBEG00000020291	si:dkey-89b17.4	96	46.774	Labrus_bergylta
ENSLOCG00000003238	si:dkey-89b17.4	99	39.309	ENSLBEG00000016562	znf646	99	40.909	Labrus_bergylta
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSMAMG00000009604	si:dkey-89b17.4	96	46.774	Mastacembelus_armatus
ENSLOCG00000003238	si:dkey-89b17.4	99	55.714	ENSMAMG00000009313	znf646	99	55.714	Mastacembelus_armatus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSMZEG00005003901	si:dkey-89b17.4	96	46.774	Maylandia_zebra
ENSLOCG00000003238	si:dkey-89b17.4	99	40.385	ENSMZEG00005011264	znf646	99	40.260	Maylandia_zebra
ENSLOCG00000003238	si:dkey-89b17.4	99	44.444	ENSMMOG00000002311	znf646	98	44.444	Mola_mola
ENSLOCG00000003238	si:dkey-89b17.4	96	52.727	ENSMMOG00000012741	si:dkey-89b17.4	96	46.774	Mola_mola
ENSLOCG00000003238	si:dkey-89b17.4	99	40.000	ENSMALG00000002274	-	99	57.143	Monopterus_albus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSMALG00000019558	si:dkey-89b17.4	96	46.774	Monopterus_albus
ENSLOCG00000003238	si:dkey-89b17.4	99	39.850	ENSNBRG00000022534	znf646	99	39.610	Neolamprologus_brichardi
ENSLOCG00000003238	si:dkey-89b17.4	99	40.476	ENSNBRG00000020314	si:dkey-89b17.4	99	40.344	Neolamprologus_brichardi
ENSLOCG00000003238	si:dkey-89b17.4	99	50.267	ENSONIG00000019947	-	100	50.267	Oreochromis_niloticus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSORLG00000024255	si:dkey-89b17.4	96	46.774	Oryzias_latipes
ENSLOCG00000003238	si:dkey-89b17.4	99	87.500	ENSORLG00000007885	znf646	99	87.500	Oryzias_latipes
ENSLOCG00000003238	si:dkey-89b17.4	99	87.500	ENSORLG00020010285	znf646	99	87.500	Oryzias_latipes_hni
ENSLOCG00000003238	si:dkey-89b17.4	99	87.500	ENSORLG00015008733	znf646	99	87.500	Oryzias_latipes_hsok
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSOMEG00000020587	si:dkey-89b17.4	96	46.774	Oryzias_melastigma
ENSLOCG00000003238	si:dkey-89b17.4	99	37.162	ENSOMEG00000015658	znf646	99	37.282	Oryzias_melastigma
ENSLOCG00000003238	si:dkey-89b17.4	98	47.922	ENSPMGG00000015931	-	86	46.866	Periophthalmus_magnuspinnatus
ENSLOCG00000003238	si:dkey-89b17.4	98	35.191	ENSPMGG00000004639	znf646	98	55.224	Periophthalmus_magnuspinnatus
ENSLOCG00000003238	si:dkey-89b17.4	99	42.470	ENSPFOG00000004826	-	98	33.920	Poecilia_formosa
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSPFOG00000008241	si:dkey-89b17.4	96	46.774	Poecilia_formosa
ENSLOCG00000003238	si:dkey-89b17.4	100	37.167	ENSPLAG00000010454	-	99	36.954	Poecilia_latipinna
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSPLAG00000011382	si:dkey-89b17.4	96	46.774	Poecilia_latipinna
ENSLOCG00000003238	si:dkey-89b17.4	99	35.522	ENSPMEG00000018283	znf646	98	36.508	Poecilia_mexicana
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSPMEG00000000141	si:dkey-89b17.4	96	46.774	Poecilia_mexicana
ENSLOCG00000003238	si:dkey-89b17.4	98	38.636	ENSPREG00000017637	znf646	95	35.685	Poecilia_reticulata
ENSLOCG00000003238	si:dkey-89b17.4	99	50.000	ENSPREG00000012579	si:dkey-89b17.4	96	46.774	Poecilia_reticulata
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSPNYG00000011901	si:dkey-89b17.4	96	46.774	Pundamilia_nyererei
ENSLOCG00000003238	si:dkey-89b17.4	99	40.188	ENSPNYG00000017692	znf646	99	39.944	Pundamilia_nyererei
ENSLOCG00000003238	si:dkey-89b17.4	99	51.471	ENSPNAG00000022072	si:dkey-89b17.4	98	51.471	Pygocentrus_nattereri
ENSLOCG00000003238	si:dkey-89b17.4	99	42.700	ENSPNAG00000000750	znf646	99	42.608	Pygocentrus_nattereri
ENSLOCG00000003238	si:dkey-89b17.4	99	59.459	ENSSFOG00015004737	si:dkey-89b17.4	99	59.459	Scleropages_formosus
ENSLOCG00000003238	si:dkey-89b17.4	99	37.983	ENSSMAG00000012378	znf646	99	37.713	Scophthalmus_maximus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSSDUG00000015931	si:dkey-89b17.4	96	46.774	Seriola_dumerili
ENSLOCG00000003238	si:dkey-89b17.4	99	55.714	ENSSDUG00000002675	znf646	99	38.910	Seriola_dumerili
ENSLOCG00000003238	si:dkey-89b17.4	99	55.714	ENSSLDG00000018521	znf646	99	38.910	Seriola_lalandi_dorsalis
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSSLDG00000012415	si:dkey-89b17.4	96	46.774	Seriola_lalandi_dorsalis
ENSLOCG00000003238	si:dkey-89b17.4	99	39.585	ENSSPAG00000016701	znf646	99	39.363	Stegastes_partitus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSSPAG00000018810	si:dkey-89b17.4	96	46.774	Stegastes_partitus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSTRUG00000020495	si:dkey-89b17.4	96	46.774	Takifugu_rubripes
ENSLOCG00000003238	si:dkey-89b17.4	99	40.734	ENSTRUG00000025597	znf646	98	40.734	Takifugu_rubripes
ENSLOCG00000003238	si:dkey-89b17.4	99	42.661	ENSTNIG00000001159	si:dkey-89b17.4	99	39.429	Tetraodon_nigroviridis
ENSLOCG00000003238	si:dkey-89b17.4	99	30.587	ENSTNIG00000000073	znf646	98	37.152	Tetraodon_nigroviridis
ENSLOCG00000003238	si:dkey-89b17.4	99	50.000	ENSXCOG00000001645	si:dkey-89b17.4	96	46.774	Xiphophorus_couchianus
ENSLOCG00000003238	si:dkey-89b17.4	100	32.353	ENSXCOG00000002714	-	95	31.985	Xiphophorus_couchianus
ENSLOCG00000003238	si:dkey-89b17.4	99	46.774	ENSXMAG00000024528	si:dkey-89b17.4	96	46.774	Xiphophorus_maculatus
ENSLOCG00000003238	si:dkey-89b17.4	96	32.717	ENSXMAG00000018743	-	96	32.511	Xiphophorus_maculatus