EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003321 (Gene tree)
Gene ID: 102695141
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3969 bases
Position: chrLG6:5508801-5512769
Accession: 102695141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000003927	Sua5_yciO_yrdC	PF01300.18	3.1e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000003935	-	732	XM_006631382	ENSLOCP00000003927	243 (aa)	XP_006631445	W5M6B9

Gene Model

Click here to download ENSLOCG00000003321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003321	yrdc	93	61.333	ENSG00000196449	YRDC	80	61.333	Homo_sapiens
ENSLOCG00000003321	yrdc	97	67.797	ENSAPOG00000024293	yrdc	89	67.797	Acanthochromis_polyacanthus
ENSLOCG00000003321	yrdc	78	65.079	ENSAMEG00000001173	YRDC	99	65.079	Ailuropoda_melanoleuca
ENSLOCG00000003321	yrdc	97	69.915	ENSACIG00000017330	yrdc	86	69.915	Amphilophus_citrinellus
ENSLOCG00000003321	yrdc	97	68.644	ENSAOCG00000021647	yrdc	89	68.644	Amphiprion_ocellaris
ENSLOCG00000003321	yrdc	97	68.220	ENSAPEG00000006164	yrdc	89	68.220	Amphiprion_percula
ENSLOCG00000003321	yrdc	97	69.492	ENSATEG00000010086	yrdc	87	69.492	Anabas_testudineus
ENSLOCG00000003321	yrdc	80	63.918	ENSACAG00000017203	YRDC	92	64.103	Anolis_carolinensis
ENSLOCG00000003321	yrdc	93	58.150	ENSANAG00000031052	-	82	58.150	Aotus_nancymaae
ENSLOCG00000003321	yrdc	88	63.850	ENSANAG00000028788	-	90	63.850	Aotus_nancymaae
ENSLOCG00000003321	yrdc	97	69.068	ENSACLG00000027775	yrdc	86	69.068	Astatotilapia_calliptera
ENSLOCG00000003321	yrdc	97	68.908	ENSAMXG00000037791	yrdc	88	69.231	Astyanax_mexicanus
ENSLOCG00000003321	yrdc	87	64.151	ENSBTAG00000006510	YRDC	76	64.151	Bos_taurus
ENSLOCG00000003321	yrdc	84	35.294	WBGene00012997	Y48C3A.18	94	32.479	Caenorhabditis_elegans
ENSLOCG00000003321	yrdc	93	61.333	ENSCJAG00000002078	YRDC	61	61.333	Callithrix_jacchus
ENSLOCG00000003321	yrdc	93	61.333	ENSCAFG00000003253	YRDC	81	61.333	Canis_familiaris
ENSLOCG00000003321	yrdc	93	62.667	ENSCAFG00020007843	YRDC	81	62.667	Canis_lupus_dingo
ENSLOCG00000003321	yrdc	93	60.889	ENSCHIG00000007882	YRDC	80	60.889	Capra_hircus
ENSLOCG00000003321	yrdc	70	66.082	ENSTSYG00000005555	YRDC	61	66.082	Carlito_syrichta
ENSLOCG00000003321	yrdc	91	61.818	ENSCPOG00000036144	YRDC	78	61.818	Cavia_porcellus
ENSLOCG00000003321	yrdc	93	61.333	ENSCCAG00000028891	YRDC	80	61.333	Cebus_capucinus
ENSLOCG00000003321	yrdc	93	60.889	ENSCATG00000036928	YRDC	80	60.889	Cercocebus_atys
ENSLOCG00000003321	yrdc	91	60.455	ENSCLAG00000015012	YRDC	78	60.455	Chinchilla_lanigera
ENSLOCG00000003321	yrdc	93	60.889	ENSCSAG00000001116	YRDC	80	60.889	Chlorocebus_sabaeus
ENSLOCG00000003321	yrdc	64	59.355	ENSCHOG00000005500	YRDC	74	59.355	Choloepus_hoffmanni
ENSLOCG00000003321	yrdc	87	66.351	ENSCPBG00000018446	YRDC	90	66.351	Chrysemys_picta_bellii
ENSLOCG00000003321	yrdc	85	48.148	ENSCING00000007564	-	99	48.148	Ciona_intestinalis
ENSLOCG00000003321	yrdc	85	45.755	ENSCSAVG00000009982	-	99	45.755	Ciona_savignyi
ENSLOCG00000003321	yrdc	93	60.889	ENSCANG00000031111	YRDC	80	60.889	Colobus_angolensis_palliatus
ENSLOCG00000003321	yrdc	93	56.637	ENSCGRG00001000829	-	62	56.637	Cricetulus_griseus_chok1gshd
ENSLOCG00000003321	yrdc	93	61.947	ENSCGRG00001014496	-	80	61.947	Cricetulus_griseus_chok1gshd
ENSLOCG00000003321	yrdc	52	69.048	ENSCGRG00000001307	-	98	69.048	Cricetulus_griseus_crigri
ENSLOCG00000003321	yrdc	95	65.086	ENSCSEG00000019075	yrdc	82	65.086	Cynoglossus_semilaevis
ENSLOCG00000003321	yrdc	97	66.525	ENSCVAG00000017355	yrdc	88	66.525	Cyprinodon_variegatus
ENSLOCG00000003321	yrdc	100	67.078	ENSDARG00000041428	yrdc	100	67.078	Danio_rerio
ENSLOCG00000003321	yrdc	91	60.455	ENSDNOG00000038789	-	79	60.591	Dasypus_novemcinctus
ENSLOCG00000003321	yrdc	81	49.495	ENSDNOG00000036198	-	96	49.495	Dasypus_novemcinctus
ENSLOCG00000003321	yrdc	80	67.692	ENSDORG00000008788	Yrdc	85	67.692	Dipodomys_ordii
ENSLOCG00000003321	yrdc	79	51.546	FBgn0061361	CG33786	77	51.546	Drosophila_melanogaster
ENSLOCG00000003321	yrdc	91	46.818	ENSETEG00000003442	YRDC	79	46.818	Echinops_telfairi
ENSLOCG00000003321	yrdc	91	50.455	ENSEBUG00000014080	yrdc	91	50.455	Eptatretus_burgeri
ENSLOCG00000003321	yrdc	93	62.222	ENSEASG00005012253	YRDC	80	62.222	Equus_asinus_asinus
ENSLOCG00000003321	yrdc	93	62.222	ENSECAG00000022522	YRDC	80	62.222	Equus_caballus
ENSLOCG00000003321	yrdc	97	68.619	ENSELUG00000018071	yrdc	78	68.619	Esox_lucius
ENSLOCG00000003321	yrdc	93	60.000	ENSFCAG00000011018	YRDC	80	60.000	Felis_catus
ENSLOCG00000003321	yrdc	78	71.579	ENSFALG00000000964	YRDC	89	70.619	Ficedula_albicollis
ENSLOCG00000003321	yrdc	97	63.983	ENSFHEG00000001029	yrdc	87	64.706	Fundulus_heteroclitus
ENSLOCG00000003321	yrdc	85	69.082	ENSGMOG00000015635	yrdc	99	69.082	Gadus_morhua
ENSLOCG00000003321	yrdc	90	65.596	ENSGALG00000029001	YRDC	85	65.596	Gallus_gallus
ENSLOCG00000003321	yrdc	97	66.102	ENSGAFG00000008396	yrdc	87	66.102	Gambusia_affinis
ENSLOCG00000003321	yrdc	97	66.109	ENSGACG00000013878	yrdc	98	66.109	Gasterosteus_aculeatus
ENSLOCG00000003321	yrdc	92	64.286	ENSGAGG00000014968	YRDC	97	64.286	Gopherus_agassizii
ENSLOCG00000003321	yrdc	93	61.333	ENSGGOG00000007619	YRDC	80	61.333	Gorilla_gorilla
ENSLOCG00000003321	yrdc	97	69.492	ENSHBUG00000009298	yrdc	86	69.492	Haplochromis_burtoni
ENSLOCG00000003321	yrdc	93	60.444	ENSHGLG00000014075	YRDC	80	60.444	Heterocephalus_glaber_female
ENSLOCG00000003321	yrdc	86	64.423	ENSHGLG00100002734	YRDC	74	64.423	Heterocephalus_glaber_male
ENSLOCG00000003321	yrdc	97	63.983	ENSHCOG00000006598	yrdc	91	63.983	Hippocampus_comes
ENSLOCG00000003321	yrdc	98	70.464	ENSIPUG00000014985	yrdc	96	70.464	Ictalurus_punctatus
ENSLOCG00000003321	yrdc	93	61.504	ENSSTOG00000001643	YRDC	80	61.504	Ictidomys_tridecemlineatus
ENSLOCG00000003321	yrdc	97	67.797	ENSKMAG00000013468	yrdc	87	67.797	Kryptolebias_marmoratus
ENSLOCG00000003321	yrdc	99	70.124	ENSLBEG00000027501	yrdc	88	70.124	Labrus_bergylta
ENSLOCG00000003321	yrdc	98	67.347	ENSLACG00000010689	YRDC	99	71.296	Latimeria_chalumnae
ENSLOCG00000003321	yrdc	85	65.217	ENSLAFG00000017556	YRDC	74	65.217	Loxodonta_africana
ENSLOCG00000003321	yrdc	86	64.904	ENSMFAG00000003487	YRDC	98	64.286	Macaca_fascicularis
ENSLOCG00000003321	yrdc	93	60.889	ENSMMUG00000005372	YRDC	59	60.889	Macaca_mulatta
ENSLOCG00000003321	yrdc	93	60.889	ENSMNEG00000029348	YRDC	80	60.889	Macaca_nemestrina
ENSLOCG00000003321	yrdc	61	68.456	ENSMLEG00000041122	YRDC	97	68.456	Mandrillus_leucophaeus
ENSLOCG00000003321	yrdc	97	67.089	ENSMAMG00000007315	yrdc	87	67.089	Mastacembelus_armatus
ENSLOCG00000003321	yrdc	97	69.068	ENSMZEG00005006948	yrdc	86	69.068	Maylandia_zebra
ENSLOCG00000003321	yrdc	82	70.352	ENSMGAG00000002833	YRDC	97	70.352	Meleagris_gallopavo
ENSLOCG00000003321	yrdc	88	63.256	ENSMICG00000031688	YRDC	77	63.256	Microcebus_murinus
ENSLOCG00000003321	yrdc	64	59.615	ENSMOCG00000000164	-	61	59.615	Microtus_ochrogaster
ENSLOCG00000003321	yrdc	97	68.644	ENSMMOG00000002119	yrdc	86	68.644	Mola_mola
ENSLOCG00000003321	yrdc	91	63.514	ENSMODG00000017750	YRDC	79	63.514	Monodelphis_domestica
ENSLOCG00000003321	yrdc	98	65.966	ENSMALG00000012471	yrdc	88	65.966	Monopterus_albus
ENSLOCG00000003321	yrdc	79	64.767	MGP_CAROLIEiJ_G0026453	Yrdc	98	71.845	Mus_caroli
ENSLOCG00000003321	yrdc	90	61.927	ENSMUSG00000028889	Yrdc	100	71.429	Mus_musculus
ENSLOCG00000003321	yrdc	86	62.857	MGP_PahariEiJ_G0028784	Yrdc	100	70.476	Mus_pahari
ENSLOCG00000003321	yrdc	86	63.810	MGP_SPRETEiJ_G0027432	Yrdc	75	63.810	Mus_spretus
ENSLOCG00000003321	yrdc	91	61.883	ENSMPUG00000014542	YRDC	88	61.883	Mustela_putorius_furo
ENSLOCG00000003321	yrdc	84	55.610	ENSMLUG00000028796	-	73	55.610	Myotis_lucifugus
ENSLOCG00000003321	yrdc	83	61.194	ENSMLUG00000024310	-	97	61.194	Myotis_lucifugus
ENSLOCG00000003321	yrdc	95	57.377	ENSMLUG00000000955	-	87	57.377	Myotis_lucifugus
ENSLOCG00000003321	yrdc	85	65.700	ENSNGAG00000019099	Yrdc	74	65.700	Nannospalax_galili
ENSLOCG00000003321	yrdc	97	69.492	ENSNBRG00000009475	yrdc	87	69.492	Neolamprologus_brichardi
ENSLOCG00000003321	yrdc	87	64.623	ENSNLEG00000011665	YRDC	77	63.721	Nomascus_leucogenys
ENSLOCG00000003321	yrdc	85	66.990	ENSMEUG00000005068	YRDC	96	66.990	Notamacropus_eugenii
ENSLOCG00000003321	yrdc	88	63.256	ENSODEG00000007401	YRDC	100	71.429	Octodon_degus
ENSLOCG00000003321	yrdc	97	69.068	ENSONIG00000016213	yrdc	97	69.068	Oreochromis_niloticus
ENSLOCG00000003321	yrdc	93	61.778	ENSOCUG00000005384	YRDC	76	61.778	Oryctolagus_cuniculus
ENSLOCG00000003321	yrdc	97	65.966	ENSORLG00000014393	yrdc	88	65.966	Oryzias_latipes
ENSLOCG00000003321	yrdc	97	66.525	ENSORLG00020019663	yrdc	88	66.525	Oryzias_latipes_hni
ENSLOCG00000003321	yrdc	97	66.102	ENSORLG00015004625	yrdc	88	66.102	Oryzias_latipes_hsok
ENSLOCG00000003321	yrdc	97	66.949	ENSOMEG00000018550	yrdc	88	66.949	Oryzias_melastigma
ENSLOCG00000003321	yrdc	93	60.444	ENSOGAG00000030474	YRDC	81	60.444	Otolemur_garnettii
ENSLOCG00000003321	yrdc	93	60.889	ENSOARG00000019873	YRDC	80	60.889	Ovis_aries
ENSLOCG00000003321	yrdc	60	69.388	ENSPPAG00000039722	-	97	69.388	Pan_paniscus
ENSLOCG00000003321	yrdc	93	60.444	ENSPPRG00000007752	YRDC	80	60.444	Panthera_pardus
ENSLOCG00000003321	yrdc	64	64.744	ENSPTIG00000019821	YRDC	66	64.744	Panthera_tigris_altaica
ENSLOCG00000003321	yrdc	93	61.333	ENSPTRG00000000557	YRDC	80	61.333	Pan_troglodytes
ENSLOCG00000003321	yrdc	93	60.889	ENSPANG00000006487	YRDC	60	60.889	Papio_anubis
ENSLOCG00000003321	yrdc	98	68.776	ENSPKIG00000004574	yrdc	86	68.776	Paramormyrops_kingsleyae
ENSLOCG00000003321	yrdc	87	69.668	ENSPSIG00000006483	YRDC	74	69.668	Pelodiscus_sinensis
ENSLOCG00000003321	yrdc	97	66.949	ENSPMGG00000004184	yrdc	90	66.949	Periophthalmus_magnuspinnatus
ENSLOCG00000003321	yrdc	71	67.630	ENSPEMG00000016985	Yrdc	76	67.630	Peromyscus_maniculatus_bairdii
ENSLOCG00000003321	yrdc	73	58.989	ENSPMAG00000002905	yrdc	96	58.989	Petromyzon_marinus
ENSLOCG00000003321	yrdc	88	64.651	ENSPCIG00000025731	YRDC	77	64.651	Phascolarctos_cinereus
ENSLOCG00000003321	yrdc	97	66.949	ENSPFOG00000023097	yrdc	87	66.949	Poecilia_formosa
ENSLOCG00000003321	yrdc	97	66.525	ENSPLAG00000020882	yrdc	87	66.525	Poecilia_latipinna
ENSLOCG00000003321	yrdc	97	66.949	ENSPMEG00000013237	yrdc	87	66.949	Poecilia_mexicana
ENSLOCG00000003321	yrdc	97	66.102	ENSPREG00000005285	yrdc	87	66.102	Poecilia_reticulata
ENSLOCG00000003321	yrdc	87	64.623	ENSPPYG00000001523	-	86	64.623	Pongo_abelii
ENSLOCG00000003321	yrdc	91	60.909	ENSPCAG00000016850	YRDC	79	60.909	Procavia_capensis
ENSLOCG00000003321	yrdc	88	63.256	ENSPCOG00000013214	YRDC	76	63.256	Propithecus_coquereli
ENSLOCG00000003321	yrdc	87	63.208	ENSPVAG00000010147	YRDC	75	63.208	Pteropus_vampyrus
ENSLOCG00000003321	yrdc	97	69.068	ENSPNYG00000013956	yrdc	86	69.068	Pundamilia_nyererei
ENSLOCG00000003321	yrdc	91	71.364	ENSPNAG00000015625	yrdc	89	71.364	Pygocentrus_nattereri
ENSLOCG00000003321	yrdc	86	63.810	ENSRNOG00000025424	Yrdc	75	63.810	Rattus_norvegicus
ENSLOCG00000003321	yrdc	93	60.889	ENSRBIG00000032289	YRDC	80	60.889	Rhinopithecus_bieti
ENSLOCG00000003321	yrdc	94	60.086	ENSRROG00000039370	YRDC	79	60.086	Rhinopithecus_roxellana
ENSLOCG00000003321	yrdc	85	65.534	ENSSBOG00000018937	YRDC	87	65.534	Saimiri_boliviensis_boliviensis
ENSLOCG00000003321	yrdc	60	70.345	ENSSHAG00000013957	-	98	70.345	Sarcophilus_harrisii
ENSLOCG00000003321	yrdc	87	71.226	ENSSFOG00015006128	yrdc	91	71.226	Scleropages_formosus
ENSLOCG00000003321	yrdc	97	66.949	ENSSMAG00000005195	yrdc	88	66.949	Scophthalmus_maximus
ENSLOCG00000003321	yrdc	97	69.492	ENSSDUG00000009775	yrdc	87	69.492	Seriola_dumerili
ENSLOCG00000003321	yrdc	53	31.387	ENSSDUG00000006631	-	64	30.534	Seriola_dumerili
ENSLOCG00000003321	yrdc	57	31.944	ENSSDUG00000006736	-	74	31.944	Seriola_dumerili
ENSLOCG00000003321	yrdc	53	30.534	ENSSLDG00000008694	-	64	30.534	Seriola_lalandi_dorsalis
ENSLOCG00000003321	yrdc	97	69.492	ENSSLDG00000003196	yrdc	87	69.492	Seriola_lalandi_dorsalis
ENSLOCG00000003321	yrdc	88	70.892	ENSSPUG00000003946	YRDC	83	70.892	Sphenodon_punctatus
ENSLOCG00000003321	yrdc	97	66.949	ENSSPAG00000012559	yrdc	87	66.949	Stegastes_partitus
ENSLOCG00000003321	yrdc	93	61.947	ENSSSCG00000040425	YRDC	80	61.947	Sus_scrofa
ENSLOCG00000003321	yrdc	59	76.224	ENSTGUG00000001507	YRDC	97	76.224	Taeniopygia_guttata
ENSLOCG00000003321	yrdc	98	61.826	ENSTRUG00000005923	yrdc	88	64.050	Takifugu_rubripes
ENSLOCG00000003321	yrdc	62	66.667	ENSTBEG00000008863	YRDC	96	66.667	Tupaia_belangeri
ENSLOCG00000003321	yrdc	58	71.831	ENSTTRG00000013538	-	95	71.831	Tursiops_truncatus
ENSLOCG00000003321	yrdc	84	65.854	ENSUAMG00000006150	YRDC	100	65.854	Ursus_americanus
ENSLOCG00000003321	yrdc	91	48.182	ENSVPAG00000006642	YRDC	94	48.182	Vicugna_pacos
ENSLOCG00000003321	yrdc	95	65.801	ENSXETG00000014420	yrdc	97	65.801	Xenopus_tropicalis
ENSLOCG00000003321	yrdc	97	65.254	ENSXCOG00000000829	yrdc	97	65.254	Xiphophorus_couchianus
ENSLOCG00000003321	yrdc	97	64.831	ENSXMAG00000014606	yrdc	82	64.831	Xiphophorus_maculatus