EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003654 (Gene tree)
Gene ID: 102693581
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 15455 bases
Position: chrLG19:5235362-5250816
Accession: 102693581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004351	Surp	PF01805.20	1.2e-16	1	1
ENSLOCP00000004351	G-patch	PF01585.23	4.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004359	-	2766	XM_006639993	ENSLOCP00000004351	921 (aa)	XP_006640056	W5M7J3

Gene Model

Click here to download ENSLOCG00000003654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003654's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003654	cherp	79	74.373	ENSG00000085872	CHERP	99	75.777	Homo_sapiens
ENSLOCG00000003654	cherp	98	71.922	ENSAMEG00000010048	CHERP	99	72.688	Ailuropoda_melanoleuca
ENSLOCG00000003654	cherp	99	73.028	ENSAOCG00000017846	cherp	99	72.892	Amphiprion_ocellaris
ENSLOCG00000003654	cherp	99	73.504	ENSAPEG00000021128	cherp	99	73.718	Amphiprion_percula
ENSLOCG00000003654	cherp	99	72.275	ENSATEG00000006341	cherp	99	74.038	Anabas_testudineus
ENSLOCG00000003654	cherp	76	73.103	ENSAPLG00000010773	CHERP	99	73.760	Anas_platyrhynchos
ENSLOCG00000003654	cherp	79	73.047	ENSANAG00000024284	CHERP	99	74.894	Aotus_nancymaae
ENSLOCG00000003654	cherp	99	72.756	ENSACLG00000020053	cherp	99	73.369	Astatotilapia_calliptera
ENSLOCG00000003654	cherp	100	75.551	ENSAMXG00000021637	cherp	94	75.786	Astyanax_mexicanus
ENSLOCG00000003654	cherp	99	74.231	ENSBTAG00000005289	CHERP	99	75.777	Bos_taurus
ENSLOCG00000003654	cherp	79	73.047	ENSCJAG00000040462	CHERP	99	74.894	Callithrix_jacchus
ENSLOCG00000003654	cherp	78	74.271	ENSCAFG00000015671	CHERP	99	75.991	Canis_familiaris
ENSLOCG00000003654	cherp	99	68.191	ENSCAFG00020009941	CHERP	99	75.000	Canis_lupus_dingo
ENSLOCG00000003654	cherp	86	84.043	ENSCHIG00000013765	CHERP	96	84.043	Capra_hircus
ENSLOCG00000003654	cherp	88	70.595	ENSCAPG00000000910	CHERP	68	76.863	Cavia_aperea
ENSLOCG00000003654	cherp	78	73.351	ENSCPOG00000019949	CHERP	99	74.789	Cavia_porcellus
ENSLOCG00000003654	cherp	79	73.047	ENSCCAG00000031534	CHERP	99	74.894	Cebus_capucinus
ENSLOCG00000003654	cherp	79	72.823	ENSCATG00000031409	CHERP	99	74.815	Cercocebus_atys
ENSLOCG00000003654	cherp	87	75.298	ENSCLAG00000005484	CHERP	94	76.435	Chinchilla_lanigera
ENSLOCG00000003654	cherp	79	74.397	ENSCSAG00000005740	CHERP	99	75.884	Chlorocebus_sabaeus
ENSLOCG00000003654	cherp	100	74.574	ENSCPBG00000014970	CHERP	100	75.135	Chrysemys_picta_bellii
ENSLOCG00000003654	cherp	68	56.944	ENSCING00000004814	-	54	74.194	Ciona_intestinalis
ENSLOCG00000003654	cherp	79	74.900	ENSCANG00000032053	CHERP	99	75.884	Colobus_angolensis_palliatus
ENSLOCG00000003654	cherp	79	72.445	ENSCGRG00001023316	Cherp	99	74.394	Cricetulus_griseus_chok1gshd
ENSLOCG00000003654	cherp	78	74.069	ENSCGRG00000015901	Cherp	99	75.510	Cricetulus_griseus_crigri
ENSLOCG00000003654	cherp	79	74.633	ENSCSEG00000019700	cherp	100	72.275	Cynoglossus_semilaevis
ENSLOCG00000003654	cherp	75	71.932	ENSCVAG00000003622	cherp	93	71.328	Cyprinodon_variegatus
ENSLOCG00000003654	cherp	78	77.548	ENSDARG00000021812	cherp	100	79.104	Danio_rerio
ENSLOCG00000003654	cherp	78	73.896	ENSDORG00000027623	Cherp	100	74.173	Dipodomys_ordii
ENSLOCG00000003654	cherp	62	65.625	FBgn0261872	scaf6	54	65.625	Drosophila_melanogaster
ENSLOCG00000003654	cherp	78	74.665	ENSEASG00005000428	CHERP	92	75.777	Equus_asinus_asinus
ENSLOCG00000003654	cherp	78	74.369	ENSECAG00000012713	CHERP	99	75.670	Equus_caballus
ENSLOCG00000003654	cherp	79	79.245	ENSELUG00000023026	cherp	98	74.242	Esox_lucius
ENSLOCG00000003654	cherp	78	72.775	ENSFCAG00000013172	CHERP	99	74.841	Felis_catus
ENSLOCG00000003654	cherp	79	74.599	ENSFALG00000013410	CHERP	86	75.322	Ficedula_albicollis
ENSLOCG00000003654	cherp	78	68.351	ENSFDAG00000015981	CHERP	100	68.837	Fukomys_damarensis
ENSLOCG00000003654	cherp	70	91.228	ENSFHEG00000009720	cherp	79	64.060	Fundulus_heteroclitus
ENSLOCG00000003654	cherp	98	70.250	ENSGMOG00000008654	cherp	99	70.575	Gadus_morhua
ENSLOCG00000003654	cherp	79	74.665	ENSGALG00000003824	CHERP	88	74.705	Gallus_gallus
ENSLOCG00000003654	cherp	99	72.406	ENSGACG00000002053	cherp	99	71.658	Gasterosteus_aculeatus
ENSLOCG00000003654	cherp	100	74.681	ENSGAGG00000014208	CHERP	100	75.242	Gopherus_agassizii
ENSLOCG00000003654	cherp	88	87.097	ENSHBUG00000007405	cherp	90	87.097	Haplochromis_burtoni
ENSLOCG00000003654	cherp	79	74.403	ENSHGLG00000002993	CHERP	99	75.319	Heterocephalus_glaber_female
ENSLOCG00000003654	cherp	58	69.925	ENSHGLG00100010390	CHERP	68	69.925	Heterocephalus_glaber_male
ENSLOCG00000003654	cherp	79	71.716	ENSHCOG00000007691	cherp	100	69.639	Hippocampus_comes
ENSLOCG00000003654	cherp	100	77.814	ENSIPUG00000025008	cherp	100	78.051	Ictalurus_punctatus
ENSLOCG00000003654	cherp	78	75.000	ENSSTOG00000012089	CHERP	99	76.247	Ictidomys_tridecemlineatus
ENSLOCG00000003654	cherp	99	64.931	ENSJJAG00000017982	Cherp	81	75.335	Jaculus_jaculus
ENSLOCG00000003654	cherp	79	73.144	ENSKMAG00000009101	cherp	79	71.141	Kryptolebias_marmoratus
ENSLOCG00000003654	cherp	78	71.198	ENSLBEG00000007586	cherp	91	71.506	Labrus_bergylta
ENSLOCG00000003654	cherp	79	71.742	ENSLACG00000018221	CHERP	99	72.349	Latimeria_chalumnae
ENSLOCG00000003654	cherp	78	73.803	ENSLAFG00000009096	CHERP	100	76.026	Loxodonta_africana
ENSLOCG00000003654	cherp	79	72.919	ENSMFAG00000033267	CHERP	99	74.894	Macaca_fascicularis
ENSLOCG00000003654	cherp	99	69.915	ENSMMUG00000012958	CHERP	82	74.373	Macaca_mulatta
ENSLOCG00000003654	cherp	79	72.919	ENSMNEG00000004125	CHERP	99	74.894	Macaca_nemestrina
ENSLOCG00000003654	cherp	66	84.746	ENSMLEG00000044337	CHERP	100	80.548	Mandrillus_leucophaeus
ENSLOCG00000003654	cherp	99	71.852	ENSMAMG00000022269	cherp	99	74.011	Mastacembelus_armatus
ENSLOCG00000003654	cherp	99	72.650	ENSMZEG00005018014	cherp	99	73.262	Maylandia_zebra
ENSLOCG00000003654	cherp	67	76.948	ENSMGAG00000005571	CHERP	96	75.357	Meleagris_gallopavo
ENSLOCG00000003654	cherp	79	72.881	ENSMAUG00000015856	Cherp	99	74.657	Mesocricetus_auratus
ENSLOCG00000003654	cherp	78	75.871	ENSMICG00000004577	CHERP	100	75.793	Microcebus_murinus
ENSLOCG00000003654	cherp	79	74.211	ENSMOCG00000014697	Cherp	99	75.615	Microtus_ochrogaster
ENSLOCG00000003654	cherp	99	68.196	ENSMMOG00000008525	cherp	80	71.757	Mola_mola
ENSLOCG00000003654	cherp	78	73.553	ENSMODG00000014938	CHERP	100	74.419	Monodelphis_domestica
ENSLOCG00000003654	cherp	100	71.444	ENSMALG00000020688	cherp	100	74.015	Monopterus_albus
ENSLOCG00000003654	cherp	79	72.846	MGP_CAROLIEiJ_G0031220	Cherp	99	74.628	Mus_caroli
ENSLOCG00000003654	cherp	79	72.751	ENSMUSG00000052488	Cherp	99	73.807	Mus_musculus
ENSLOCG00000003654	cherp	79	72.966	MGP_PahariEiJ_G0021685	Cherp	99	75.080	Mus_pahari
ENSLOCG00000003654	cherp	79	73.037	MGP_SPRETEiJ_G0032341	Cherp	99	74.787	Mus_spretus
ENSLOCG00000003654	cherp	78	74.734	ENSMPUG00000016023	CHERP	77	75.770	Mustela_putorius_furo
ENSLOCG00000003654	cherp	79	68.635	ENSMLUG00000013881	CHERP	99	70.940	Myotis_lucifugus
ENSLOCG00000003654	cherp	79	72.739	ENSNGAG00000023323	Cherp	99	73.867	Nannospalax_galili
ENSLOCG00000003654	cherp	100	62.791	ENSNBRG00000001914	cherp	81	72.065	Neolamprologus_brichardi
ENSLOCG00000003654	cherp	79	74.397	ENSNLEG00000005536	CHERP	99	75.884	Nomascus_leucogenys
ENSLOCG00000003654	cherp	71	78.033	ENSMEUG00000010840	CHERP	91	77.705	Notamacropus_eugenii
ENSLOCG00000003654	cherp	78	74.966	ENSODEG00000001528	CHERP	81	75.574	Octodon_degus
ENSLOCG00000003654	cherp	100	72.601	ENSONIG00000007686	cherp	99	73.369	Oreochromis_niloticus
ENSLOCG00000003654	cherp	79	73.289	ENSORLG00000000138	cherp	79	73.748	Oryzias_latipes
ENSLOCG00000003654	cherp	79	73.154	ENSORLG00020013142	cherp	87	76.724	Oryzias_latipes_hni
ENSLOCG00000003654	cherp	79	73.154	ENSORLG00015008911	cherp	79	73.342	Oryzias_latipes_hsok
ENSLOCG00000003654	cherp	79	72.886	ENSOMEG00000016947	cherp	99	72.329	Oryzias_melastigma
ENSLOCG00000003654	cherp	79	73.615	ENSOGAG00000005834	CHERP	79	74.799	Otolemur_garnettii
ENSLOCG00000003654	cherp	78	66.267	ENSOARG00000018876	CHERP	78	67.206	Ovis_aries
ENSLOCG00000003654	cherp	79	72.822	ENSPPAG00000029195	CHERP	99	74.709	Pan_paniscus
ENSLOCG00000003654	cherp	78	72.775	ENSPPRG00000003275	CHERP	99	74.841	Panthera_pardus
ENSLOCG00000003654	cherp	79	74.274	ENSPTRG00000010647	CHERP	99	75.696	Pan_troglodytes
ENSLOCG00000003654	cherp	79	72.919	ENSPANG00000011698	CHERP	99	74.894	Papio_anubis
ENSLOCG00000003654	cherp	77	72.715	ENSPKIG00000000423	cherp	79	74.663	Paramormyrops_kingsleyae
ENSLOCG00000003654	cherp	98	75.081	ENSPSIG00000011974	CHERP	100	74.805	Pelodiscus_sinensis
ENSLOCG00000003654	cherp	98	64.309	ENSPMGG00000023606	cherp	89	86.517	Periophthalmus_magnuspinnatus
ENSLOCG00000003654	cherp	79	71.943	ENSPEMG00000011238	Cherp	99	74.292	Peromyscus_maniculatus_bairdii
ENSLOCG00000003654	cherp	78	74.172	ENSPCIG00000019615	CHERP	95	74.894	Phascolarctos_cinereus
ENSLOCG00000003654	cherp	100	69.158	ENSPFOG00000016899	cherp	99	70.550	Poecilia_formosa
ENSLOCG00000003654	cherp	86	68.627	ENSPMEG00000002214	cherp	76	72.973	Poecilia_mexicana
ENSLOCG00000003654	cherp	99	71.013	ENSPREG00000020774	cherp	99	70.658	Poecilia_reticulata
ENSLOCG00000003654	cherp	79	71.390	ENSPPYG00000009691	CHERP	99	73.139	Pongo_abelii
ENSLOCG00000003654	cherp	88	84.043	ENSPCAG00000001337	CHERP	90	84.043	Procavia_capensis
ENSLOCG00000003654	cherp	89	82.979	ENSPVAG00000004320	CHERP	90	82.979	Pteropus_vampyrus
ENSLOCG00000003654	cherp	99	72.970	ENSPNYG00000003942	cherp	99	73.476	Pundamilia_nyererei
ENSLOCG00000003654	cherp	79	78.460	ENSPNAG00000017179	cherp	100	77.003	Pygocentrus_nattereri
ENSLOCG00000003654	cherp	79	72.977	ENSRNOG00000012323	Cherp	99	74.522	Rattus_norvegicus
ENSLOCG00000003654	cherp	79	74.332	ENSRBIG00000038621	CHERP	99	75.858	Rhinopithecus_bieti
ENSLOCG00000003654	cherp	79	72.919	ENSRROG00000040770	CHERP	99	74.894	Rhinopithecus_roxellana
ENSLOCG00000003654	cherp	79	72.952	ENSSBOG00000014492	CHERP	99	74.815	Saimiri_boliviensis_boliviensis
ENSLOCG00000003654	cherp	77	74.035	ENSSHAG00000010752	CHERP	99	74.123	Sarcophilus_harrisii
ENSLOCG00000003654	cherp	54	64.971	ENSSFOG00015008022	cherp	84	82.440	Scleropages_formosus
ENSLOCG00000003654	cherp	100	70.938	ENSSMAG00000005362	cherp	79	73.360	Scophthalmus_maximus
ENSLOCG00000003654	cherp	99	71.176	ENSSDUG00000019712	cherp	99	73.950	Seriola_dumerili
ENSLOCG00000003654	cherp	99	71.908	ENSSLDG00000012659	cherp	99	74.576	Seriola_lalandi_dorsalis
ENSLOCG00000003654	cherp	78	75.549	ENSSPUG00000008901	CHERP	99	75.573	Sphenodon_punctatus
ENSLOCG00000003654	cherp	99	73.085	ENSSPAG00000010681	cherp	99	72.999	Stegastes_partitus
ENSLOCG00000003654	cherp	78	74.168	ENSSSCG00000013860	CHERP	99	75.884	Sus_scrofa
ENSLOCG00000003654	cherp	79	74.400	ENSTGUG00000000680	CHERP	99	74.759	Taeniopygia_guttata
ENSLOCG00000003654	cherp	99	69.510	ENSTRUG00000007429	cherp	88	70.014	Takifugu_rubripes
ENSLOCG00000003654	cherp	99	68.359	ENSTNIG00000003363	cherp	80	71.545	Tetraodon_nigroviridis
ENSLOCG00000003654	cherp	68	74.563	ENSTTRG00000015006	CHERP	89	75.499	Tursiops_truncatus
ENSLOCG00000003654	cherp	99	69.639	ENSUAMG00000017295	CHERP	80	74.345	Ursus_americanus
ENSLOCG00000003654	cherp	68	69.937	ENSUMAG00000000965	CHERP	71	69.136	Ursus_maritimus
ENSLOCG00000003654	cherp	78	72.585	ENSVVUG00000016546	CHERP	99	74.684	Vulpes_vulpes
ENSLOCG00000003654	cherp	99	70.677	ENSXETG00000002072	cherp	97	71.459	Xenopus_tropicalis