EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSLOCG00000003678 (Gene tree)
Gene ID: -
Gene Symbol: znf319b (1 of many)
Alias: znf319
Full Name: zinc finger protein 319b
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 2749 bases
Position: chrLG23:6582357-6585105
Accession: ZDB-GENE-090406-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	1	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	2	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	3	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	4	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	5	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	6	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	7	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	8	9
ENSLOCP00000004365	zf-C2H2	PF00096.26	1.2e-58	9	9
ENSLOCP00000004365	zf-met	PF12874.7	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004373	-	1755	-	ENSLOCP00000004365	585 (aa)	-	W5M7K7

Gene Model

Click here to download ENSLOCG00000003678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000003678	znf319b	66	44.872	ENSLOCG00000002246	scrt2	61	44.872
ENSLOCG00000003678	znf319b	87	42.647	ENSLOCG00000005750	gfi1b	56	42.647
ENSLOCG00000003678	znf319b	88	39.381	ENSLOCG00000017736	znf648	62	38.938
ENSLOCG00000003678	znf319b	92	34.965	ENSLOCG00000004661	-	99	34.965
ENSLOCG00000003678	znf319b	62	44.872	ENSLOCG00000007573	scrt1b	56	44.872
ENSLOCG00000003678	znf319b	64	30.660	ENSLOCG00000003801	hinfp	61	30.660
ENSLOCG00000003678	znf319b	91	45.882	ENSLOCG00000003926	znf236	69	45.882
ENSLOCG00000003678	znf319b	89	34.521	ENSLOCG00000004208	-	99	34.133
ENSLOCG00000003678	znf319b	89	33.628	ENSLOCG00000009778	prdm5	80	32.727
ENSLOCG00000003678	znf319b	88	34.943	ENSLOCG00000000714	-	91	34.943
ENSLOCG00000003678	znf319b	76	33.571	ENSLOCG00000004443	snai1a	78	33.571
ENSLOCG00000003678	znf319b	94	32.298	ENSLOCG00000016466	-	98	32.298
ENSLOCG00000003678	znf319b	88	41.573	ENSLOCG00000014366	-	99	41.573
ENSLOCG00000003678	znf319b	89	38.197	ENSLOCG00000009974	zbtb49	57	38.406
ENSLOCG00000003678	znf319b	100	100.000	ENSLOCG00000000544	znf319b	100	100.000
ENSLOCG00000003678	znf319b	89	33.756	ENSLOCG00000014144	-	100	33.756
ENSLOCG00000003678	znf319b	65	48.980	ENSLOCG00000011702	rreb1b	51	34.667
ENSLOCG00000003678	znf319b	88	38.095	ENSLOCG00000017422	-	68	38.095
ENSLOCG00000003678	znf319b	88	45.882	ENSLOCG00000018285	-	100	45.882
ENSLOCG00000003678	znf319b	88	38.782	ENSLOCG00000017864	-	100	38.782
ENSLOCG00000003678	znf319b	76	35.849	ENSLOCG00000004887	SNAI3	96	35.849
ENSLOCG00000003678	znf319b	78	34.906	ENSLOCG00000005992	SNAI2	79	33.577