EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000003745 (Gene tree)
Gene ID: 102698222
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 11759 bases
Position: chrLG10:4507506-4519264
Accession: 102698222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004486	KH_1	PF00013.29	1.6e-68	1	4
ENSLOCP00000004486	KH_1	PF00013.29	1.6e-68	2	4
ENSLOCP00000004486	KH_1	PF00013.29	1.6e-68	3	4
ENSLOCP00000004486	KH_1	PF00013.29	1.6e-68	4	4
ENSLOCP00000004472	KH_1	PF00013.29	1.6e-68	1	4
ENSLOCP00000004472	KH_1	PF00013.29	1.6e-68	2	4
ENSLOCP00000004472	KH_1	PF00013.29	1.6e-68	3	4
ENSLOCP00000004472	KH_1	PF00013.29	1.6e-68	4	4
ENSLOCP00000004472	KH_2	PF07650.17	1.1e-20	1	2
ENSLOCP00000004472	KH_2	PF07650.17	1.1e-20	2	2
ENSLOCP00000004486	KH_2	PF07650.17	1.2e-20	1	2
ENSLOCP00000004486	KH_2	PF07650.17	1.2e-20	2	2
ENSLOCP00000004472	DUF1897	PF09005.10	7.2e-14	1	2
ENSLOCP00000004472	DUF1897	PF09005.10	7.2e-14	2	2
ENSLOCP00000004486	DUF1897	PF09005.10	8e-12	1	2
ENSLOCP00000004486	DUF1897	PF09005.10	8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004480	-	5022	XM_006634770	ENSLOCP00000004472	677 (aa)	XP_015210742	W5M7W4
ENSLOCT00000004494	-	2994	-	ENSLOCP00000004486	688 (aa)	-	W5M7X8

Gene Model

Click here to download ENSLOCG00000003745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000003745	fubp1	51	32.258	ENSLOCG00000009369	pcbp3	91	34.921
ENSLOCG00000003745	fubp1	53	36.585	ENSLOCG00000013402	pcbp4	53	37.500
ENSLOCG00000003745	fubp1	95	53.789	ENSLOCG00000006229	khsrp	92	54.573
ENSLOCG00000003745	fubp1	55	41.096	ENSLOCG00000005598	pcbp2	64	41.096

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003745	fubp1	92	74.385	ENSG00000162613	FUBP1	100	71.795	Homo_sapiens
ENSLOCG00000003745	fubp1	100	74.676	ENSAPOG00000014845	fubp1	96	74.963	Acanthochromis_polyacanthus
ENSLOCG00000003745	fubp1	92	74.286	ENSAMEG00000007372	FUBP1	98	73.196	Ailuropoda_melanoleuca
ENSLOCG00000003745	fubp1	99	75.110	ENSACIG00000020024	fubp1	97	74.586	Amphilophus_citrinellus
ENSLOCG00000003745	fubp1	99	73.196	ENSAPEG00000012232	fubp1	98	70.685	Amphiprion_percula
ENSLOCG00000003745	fubp1	99	80.323	ENSATEG00000018619	fubp1	98	80.960	Anabas_testudineus
ENSLOCG00000003745	fubp1	87	78.261	ENSAPLG00000005965	FUBP1	98	70.912	Anas_platyrhynchos
ENSLOCG00000003745	fubp1	69	78.782	ENSACAG00000006310	FUBP1	94	73.887	Anolis_carolinensis
ENSLOCG00000003745	fubp1	99	80.265	ENSACLG00000006708	fubp1	98	80.180	Astatotilapia_calliptera
ENSLOCG00000003745	fubp1	83	84.324	ENSAMXG00000005525	fubp1	97	86.220	Astyanax_mexicanus
ENSLOCG00000003745	fubp1	92	74.180	ENSCJAG00000007062	FUBP1	98	71.598	Callithrix_jacchus
ENSLOCG00000003745	fubp1	92	74.286	ENSCAFG00000020361	FUBP1	98	73.088	Canis_familiaris
ENSLOCG00000003745	fubp1	87	77.397	ENSTSYG00000000148	FUBP1	98	71.429	Carlito_syrichta
ENSLOCG00000003745	fubp1	51	84.585	ENSCAPG00000011052	-	64	84.585	Cavia_aperea
ENSLOCG00000003745	fubp1	92	74.180	ENSCPOG00000002757	FUBP1	94	82.270	Cavia_porcellus
ENSLOCG00000003745	fubp1	77	60.105	ENSCCAG00000036537	FUBP1	97	61.081	Cebus_capucinus
ENSLOCG00000003745	fubp1	92	74.642	ENSCATG00000042126	FUBP1	98	73.333	Cercocebus_atys
ENSLOCG00000003745	fubp1	92	74.180	ENSCLAG00000005621	FUBP1	96	82.781	Chinchilla_lanigera
ENSLOCG00000003745	fubp1	92	74.385	ENSCSAG00000001402	FUBP1	98	71.640	Chlorocebus_sabaeus
ENSLOCG00000003745	fubp1	92	73.975	ENSCHOG00000008177	FUBP1	96	71.344	Choloepus_hoffmanni
ENSLOCG00000003745	fubp1	92	74.948	ENSCGRG00001007103	Fubp1	98	71.852	Cricetulus_griseus_chok1gshd
ENSLOCG00000003745	fubp1	87	78.082	ENSCGRG00000003372	Fubp1	94	81.560	Cricetulus_griseus_crigri
ENSLOCG00000003745	fubp1	100	74.348	ENSCSEG00000021412	fubp1	97	75.566	Cynoglossus_semilaevis
ENSLOCG00000003745	fubp1	99	79.295	ENSCVAG00000014487	fubp1	97	80.572	Cyprinodon_variegatus
ENSLOCG00000003745	fubp1	100	77.969	ENSDARG00000029248	fubp1	98	78.184	Danio_rerio
ENSLOCG00000003745	fubp1	78	63.492	ENSDNOG00000034565	-	80	58.228	Dasypus_novemcinctus
ENSLOCG00000003745	fubp1	92	74.180	ENSDORG00000016534	Fubp1	96	71.492	Dipodomys_ordii
ENSLOCG00000003745	fubp1	74	83.784	ENSETEG00000000948	-	53	74.590	Echinops_telfairi
ENSLOCG00000003745	fubp1	85	47.878	ENSEBUG00000016143	fubp1	64	66.667	Eptatretus_burgeri
ENSLOCG00000003745	fubp1	66	88.571	ENSEEUG00000001287	FUBP1	68	84.573	Erinaceus_europaeus
ENSLOCG00000003745	fubp1	99	80.842	ENSELUG00000007990	fubp1	98	81.926	Esox_lucius
ENSLOCG00000003745	fubp1	92	74.280	ENSFALG00000005768	FUBP1	96	70.475	Ficedula_albicollis
ENSLOCG00000003745	fubp1	92	73.975	ENSFDAG00000014210	FUBP1	96	81.560	Fukomys_damarensis
ENSLOCG00000003745	fubp1	99	79.736	ENSFHEG00000005230	fubp1	97	80.723	Fundulus_heteroclitus
ENSLOCG00000003745	fubp1	99	73.088	ENSGMOG00000003370	fubp1	98	72.440	Gadus_morhua
ENSLOCG00000003745	fubp1	92	74.333	ENSGALG00000008939	FUBP1	97	73.108	Gallus_gallus
ENSLOCG00000003745	fubp1	99	79.295	ENSGAFG00000020972	fubp1	97	80.572	Gambusia_affinis
ENSLOCG00000003745	fubp1	99	76.788	ENSGACG00000016563	fubp1	98	77.027	Gasterosteus_aculeatus
ENSLOCG00000003745	fubp1	99	80.412	ENSHBUG00000009835	fubp1	98	80.902	Haplochromis_burtoni
ENSLOCG00000003745	fubp1	70	71.369	ENSHGLG00000002808	-	72	71.069	Heterocephalus_glaber_female
ENSLOCG00000003745	fubp1	92	74.180	ENSHGLG00000008415	-	96	82.781	Heterocephalus_glaber_female
ENSLOCG00000003745	fubp1	92	74.180	ENSHGLG00100003417	-	98	71.176	Heterocephalus_glaber_male
ENSLOCG00000003745	fubp1	70	72.614	ENSHGLG00100001414	-	72	72.327	Heterocephalus_glaber_male
ENSLOCG00000003745	fubp1	99	78.717	ENSHCOG00000000910	fubp1	97	79.671	Hippocampus_comes
ENSLOCG00000003745	fubp1	99	81.029	ENSIPUG00000009896	fubp1	98	83.333	Ictalurus_punctatus
ENSLOCG00000003745	fubp1	92	74.180	ENSSTOG00000014312	FUBP1	98	71.492	Ictidomys_tridecemlineatus
ENSLOCG00000003745	fubp1	92	73.975	ENSJJAG00000020069	Fubp1	96	81.560	Jaculus_jaculus
ENSLOCG00000003745	fubp1	99	79.941	ENSKMAG00000018897	fubp1	98	79.851	Kryptolebias_marmoratus
ENSLOCG00000003745	fubp1	99	77.616	ENSLBEG00000012700	fubp1	95	79.198	Labrus_bergylta
ENSLOCG00000003745	fubp1	92	74.949	ENSLAFG00000003273	FUBP1	97	75.044	Loxodonta_africana
ENSLOCG00000003745	fubp1	92	74.642	ENSMFAG00000031825	FUBP1	98	73.333	Macaca_fascicularis
ENSLOCG00000003745	fubp1	92	74.847	ENSMMUG00000002899	FUBP1	98	73.560	Macaca_mulatta
ENSLOCG00000003745	fubp1	92	74.642	ENSMNEG00000045212	FUBP1	98	73.333	Macaca_nemestrina
ENSLOCG00000003745	fubp1	99	80.560	ENSMAMG00000007489	fubp1	98	81.353	Mastacembelus_armatus
ENSLOCG00000003745	fubp1	99	80.412	ENSMZEG00005024298	fubp1	98	80.902	Maylandia_zebra
ENSLOCG00000003745	fubp1	87	77.854	ENSMGAG00000009424	FUBP1	98	70.330	Meleagris_gallopavo
ENSLOCG00000003745	fubp1	92	74.180	ENSMAUG00000016428	Fubp1	94	82.270	Mesocricetus_auratus
ENSLOCG00000003745	fubp1	92	74.793	ENSMOCG00000014751	Fubp1	94	81.560	Microtus_ochrogaster
ENSLOCG00000003745	fubp1	82	81.371	ENSMMOG00000019463	fubp1	96	80.616	Mola_mola
ENSLOCG00000003745	fubp1	90	67.427	ENSMODG00000020804	FUBP1	98	66.269	Monodelphis_domestica
ENSLOCG00000003745	fubp1	99	81.029	ENSMALG00000015173	fubp1	98	82.132	Monopterus_albus
ENSLOCG00000003745	fubp1	92	74.793	MGP_CAROLIEiJ_G0025740	Fubp1	99	76.600	Mus_caroli
ENSLOCG00000003745	fubp1	92	74.587	ENSMUSG00000028034	Fubp1	99	76.417	Mus_musculus
ENSLOCG00000003745	fubp1	92	74.639	MGP_PahariEiJ_G0027191	Fubp1	94	81.560	Mus_pahari
ENSLOCG00000003745	fubp1	92	74.793	MGP_SPRETEiJ_G0026693	Fubp1	99	76.600	Mus_spretus
ENSLOCG00000003745	fubp1	92	74.134	ENSMLUG00000014802	FUBP1	98	72.581	Myotis_lucifugus
ENSLOCG00000003745	fubp1	92	74.207	ENSNGAG00000014302	Fubp1	94	81.560	Nannospalax_galili
ENSLOCG00000003745	fubp1	99	73.373	ENSNBRG00000015099	fubp1	98	71.194	Neolamprologus_brichardi
ENSLOCG00000003745	fubp1	92	71.311	ENSNLEG00000009772	FUBP1	98	71.512	Nomascus_leucogenys
ENSLOCG00000003745	fubp1	53	56.688	ENSMEUG00000007917	-	68	67.421	Notamacropus_eugenii
ENSLOCG00000003745	fubp1	89	66.667	ENSOPRG00000001175	FUBP1	96	58.370	Ochotona_princeps
ENSLOCG00000003745	fubp1	92	74.180	ENSODEG00000002600	-	96	81.560	Octodon_degus
ENSLOCG00000003745	fubp1	99	53.314	ENSODEG00000003657	-	98	49.850	Octodon_degus
ENSLOCG00000003745	fubp1	99	80.265	ENSONIG00000018381	fubp1	95	80.902	Oreochromis_niloticus
ENSLOCG00000003745	fubp1	57	82.609	ENSOANG00000009777	FUBP1	98	75.914	Ornithorhynchus_anatinus
ENSLOCG00000003745	fubp1	99	71.302	ENSORLG00000003540	fubp1	97	72.508	Oryzias_latipes
ENSLOCG00000003745	fubp1	99	78.038	ENSORLG00020005908	fubp1	94	77.943	Oryzias_latipes_hni
ENSLOCG00000003745	fubp1	99	77.778	ENSORLG00015008779	fubp1	97	78.274	Oryzias_latipes_hsok
ENSLOCG00000003745	fubp1	99	78.216	ENSOMEG00000021943	fubp1	95	78.209	Oryzias_melastigma
ENSLOCG00000003745	fubp1	92	73.984	ENSOGAG00000014233	FUBP1	98	72.621	Otolemur_garnettii
ENSLOCG00000003745	fubp1	92	74.286	ENSOARG00000013259	FUBP1	98	74.260	Ovis_aries
ENSLOCG00000003745	fubp1	92	74.180	ENSPPRG00000000413	FUBP1	98	71.492	Panthera_pardus
ENSLOCG00000003745	fubp1	92	74.180	ENSPTIG00000019450	FUBP1	98	71.492	Panthera_tigris_altaica
ENSLOCG00000003745	fubp1	99	71.616	ENSPMGG00000009060	fubp1	97	71.235	Periophthalmus_magnuspinnatus
ENSLOCG00000003745	fubp1	92	74.741	ENSPEMG00000021802	Fubp1	96	81.560	Peromyscus_maniculatus_bairdii
ENSLOCG00000003745	fubp1	65	51.852	ENSPMAG00000001644	-	100	51.852	Petromyzon_marinus
ENSLOCG00000003745	fubp1	99	79.476	ENSPFOG00000000238	fubp1	97	80.422	Poecilia_formosa
ENSLOCG00000003745	fubp1	99	74.112	ENSPLAG00000021170	fubp1	97	78.431	Poecilia_latipinna
ENSLOCG00000003745	fubp1	92	80.960	ENSPMEG00000004747	fubp1	99	81.220	Poecilia_mexicana
ENSLOCG00000003745	fubp1	99	79.442	ENSPREG00000017911	fubp1	97	80.422	Poecilia_reticulata
ENSLOCG00000003745	fubp1	75	76.639	ENSPPYG00000001219	-	68	77.358	Pongo_abelii
ENSLOCG00000003745	fubp1	69	74.127	ENSPCAG00000012617	FUBP1	96	71.302	Procavia_capensis
ENSLOCG00000003745	fubp1	92	74.180	ENSPCOG00000024974	FUBP1	98	72.041	Propithecus_coquereli
ENSLOCG00000003745	fubp1	92	68.238	ENSPVAG00000014637	FUBP1	96	67.208	Pteropus_vampyrus
ENSLOCG00000003745	fubp1	99	80.412	ENSPNYG00000004552	fubp1	98	80.902	Pundamilia_nyererei
ENSLOCG00000003745	fubp1	100	82.653	ENSPNAG00000016207	fubp1	98	84.281	Pygocentrus_nattereri
ENSLOCG00000003745	fubp1	92	74.793	ENSRNOG00000043370	Fubp1	98	71.556	Rattus_norvegicus
ENSLOCG00000003745	fubp1	92	74.385	ENSRBIG00000042950	FUBP1	98	73.275	Rhinopithecus_bieti
ENSLOCG00000003745	fubp1	92	74.385	ENSRROG00000043534	FUBP1	98	73.275	Rhinopithecus_roxellana
ENSLOCG00000003745	fubp1	92	74.180	ENSSBOG00000027299	FUBP1	98	73.373	Saimiri_boliviensis_boliviensis
ENSLOCG00000003745	fubp1	87	76.244	ENSSHAG00000005367	FUBP1	97	75.445	Sarcophilus_harrisii
ENSLOCG00000003745	fubp1	100	87.040	ENSSFOG00015010213	fubp1	98	88.671	Scleropages_formosus
ENSLOCG00000003745	fubp1	99	76.901	ENSSMAG00000012029	fubp1	96	78.070	Scophthalmus_maximus
ENSLOCG00000003745	fubp1	99	80.617	ENSSDUG00000007383	fubp1	96	81.409	Seriola_dumerili
ENSLOCG00000003745	fubp1	99	80.617	ENSSLDG00000022863	fubp1	96	81.409	Seriola_lalandi_dorsalis
ENSLOCG00000003745	fubp1	84	90.426	ENSSARG00000011730	FUBP1	67	90.426	Sorex_araneus
ENSLOCG00000003745	fubp1	99	72.529	ENSSPUG00000008389	FUBP1	98	73.145	Sphenodon_punctatus
ENSLOCG00000003745	fubp1	99	80.882	ENSSPAG00000010161	fubp1	98	81.381	Stegastes_partitus
ENSLOCG00000003745	fubp1	87	77.427	ENSTGUG00000006841	FUBP1	98	70.405	Taeniopygia_guttata
ENSLOCG00000003745	fubp1	99	75.676	ENSTRUG00000004615	fubp1	97	76.239	Takifugu_rubripes
ENSLOCG00000003745	fubp1	79	86.905	ENSTBEG00000017333	FUBP1	57	89.286	Tupaia_belangeri
ENSLOCG00000003745	fubp1	92	74.180	ENSTTRG00000000096	FUBP1	96	71.196	Tursiops_truncatus
ENSLOCG00000003745	fubp1	92	74.180	ENSVPAG00000004709	FUBP1	97	71.196	Vicugna_pacos
ENSLOCG00000003745	fubp1	99	71.324	ENSXCOG00000019354	fubp1	97	72.576	Xiphophorus_couchianus
ENSLOCG00000003745	fubp1	92	80.800	ENSXMAG00000007168	fubp1	99	81.059	Xiphophorus_maculatus