EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003776 (Gene tree)
Gene ID: 102686264
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3804 bases
Position: chrLG5:4495219-4499022
Accession: 102686264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004501	ECR1_N	PF14382.6	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004509	-	493	XM_006630302	ENSLOCP00000004501	159 (aa)	-	W5M7Z3

Gene Model

Click here to download ENSLOCG00000003776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003776	exosc1	98	75.641	ENSG00000171311	EXOSC1	91	75.641	Homo_sapiens
ENSLOCG00000003776	exosc1	100	67.000	ENSAPOG00000007822	exosc1	100	67.000	Acanthochromis_polyacanthus
ENSLOCG00000003776	exosc1	99	58.586	ENSAMEG00000000129	EXOSC1	98	58.586	Ailuropoda_melanoleuca
ENSLOCG00000003776	exosc1	94	64.921	ENSACIG00000018956	exosc1	91	64.921	Amphilophus_citrinellus
ENSLOCG00000003776	exosc1	100	66.000	ENSAOCG00000010699	exosc1	100	66.000	Amphiprion_ocellaris
ENSLOCG00000003776	exosc1	91	67.066	ENSAPEG00000012690	exosc1	97	67.066	Amphiprion_percula
ENSLOCG00000003776	exosc1	100	83.648	ENSATEG00000018683	exosc1	99	83.648	Anabas_testudineus
ENSLOCG00000003776	exosc1	96	60.104	ENSACAG00000002101	EXOSC1	96	60.104	Anolis_carolinensis
ENSLOCG00000003776	exosc1	98	75.000	ENSANAG00000034669	EXOSC1	97	75.000	Aotus_nancymaae
ENSLOCG00000003776	exosc1	94	83.221	ENSACLG00000021243	exosc1	95	83.221	Astatotilapia_calliptera
ENSLOCG00000003776	exosc1	100	86.792	ENSAMXG00000011116	exosc1	99	86.792	Astyanax_mexicanus
ENSLOCG00000003776	exosc1	99	59.184	ENSBTAG00000012699	EXOSC1	98	59.184	Bos_taurus
ENSLOCG00000003776	exosc1	96	30.049	WBGene00012966	exos-1	94	30.049	Caenorhabditis_elegans
ENSLOCG00000003776	exosc1	98	75.000	ENSCJAG00000016586	EXOSC1	97	75.000	Callithrix_jacchus
ENSLOCG00000003776	exosc1	99	58.081	ENSCAFG00000009068	EXOSC1	93	58.081	Canis_familiaris
ENSLOCG00000003776	exosc1	99	58.081	ENSCAFG00020006002	EXOSC1	93	58.081	Canis_lupus_dingo
ENSLOCG00000003776	exosc1	99	58.586	ENSCHIG00000015253	EXOSC1	98	58.586	Capra_hircus
ENSLOCG00000003776	exosc1	98	74.359	ENSTSYG00000000760	EXOSC1	97	74.359	Carlito_syrichta
ENSLOCG00000003776	exosc1	99	74.522	ENSCPOG00000001173	EXOSC1	98	74.522	Cavia_porcellus
ENSLOCG00000003776	exosc1	99	42.262	ENSCCAG00000023986	EXOSC1	98	42.262	Cebus_capucinus
ENSLOCG00000003776	exosc1	98	75.641	ENSCATG00000034114	EXOSC1	97	75.641	Cercocebus_atys
ENSLOCG00000003776	exosc1	99	74.522	ENSCLAG00000002463	EXOSC1	98	74.522	Chinchilla_lanigera
ENSLOCG00000003776	exosc1	99	59.091	ENSCSAG00000005870	EXOSC1	98	59.091	Chlorocebus_sabaeus
ENSLOCG00000003776	exosc1	94	52.105	ENSCHOG00000006477	EXOSC1	98	52.105	Choloepus_hoffmanni
ENSLOCG00000003776	exosc1	99	40.704	ENSCING00000022734	-	92	40.704	Ciona_intestinalis
ENSLOCG00000003776	exosc1	99	44.724	ENSCSAVG00000010865	-	98	44.724	Ciona_savignyi
ENSLOCG00000003776	exosc1	98	75.641	ENSCANG00000034159	EXOSC1	97	75.641	Colobus_angolensis_palliatus
ENSLOCG00000003776	exosc1	99	74.522	ENSCGRG00001000335	Exosc1	98	74.522	Cricetulus_griseus_chok1gshd
ENSLOCG00000003776	exosc1	99	74.522	ENSCGRG00000011602	Exosc1	98	74.522	Cricetulus_griseus_crigri
ENSLOCG00000003776	exosc1	100	65.909	ENSCSEG00000007895	exosc1	97	65.909	Cynoglossus_semilaevis
ENSLOCG00000003776	exosc1	100	62.500	ENSCVAG00000016748	exosc1	100	62.000	Cyprinodon_variegatus
ENSLOCG00000003776	exosc1	100	69.000	ENSDARG00000059841	exosc1	100	69.000	Danio_rerio
ENSLOCG00000003776	exosc1	65	51.724	ENSDNOG00000007983	EXOSC1	98	51.724	Dasypus_novemcinctus
ENSLOCG00000003776	exosc1	99	73.885	ENSDORG00000016528	Exosc1	98	73.885	Dipodomys_ordii
ENSLOCG00000003776	exosc1	94	40.206	FBgn0032346	Csl4	92	40.206	Drosophila_melanogaster
ENSLOCG00000003776	exosc1	99	58.586	ENSETEG00000002469	-	98	58.586	Echinops_telfairi
ENSLOCG00000003776	exosc1	97	50.000	ENSEBUG00000008164	exosc1	96	50.000	Eptatretus_burgeri
ENSLOCG00000003776	exosc1	98	57.895	ENSEASG00005008684	EXOSC1	98	57.895	Equus_asinus_asinus
ENSLOCG00000003776	exosc1	99	58.081	ENSEEUG00000005647	EXOSC1	98	58.081	Erinaceus_europaeus
ENSLOCG00000003776	exosc1	100	65.714	ENSELUG00000017369	exosc1	99	65.714	Esox_lucius
ENSLOCG00000003776	exosc1	98	61.143	ENSFCAG00000040563	EXOSC1	98	61.143	Felis_catus
ENSLOCG00000003776	exosc1	98	60.406	ENSFALG00000008450	EXOSC1	98	60.406	Ficedula_albicollis
ENSLOCG00000003776	exosc1	99	59.596	ENSFDAG00000000846	EXOSC1	98	59.596	Fukomys_damarensis
ENSLOCG00000003776	exosc1	100	62.000	ENSFHEG00000009154	exosc1	100	62.000	Fundulus_heteroclitus
ENSLOCG00000003776	exosc1	100	64.500	ENSGMOG00000008993	exosc1	100	64.500	Gadus_morhua
ENSLOCG00000003776	exosc1	98	60.465	ENSGALG00000039917	EXOSC1	98	60.465	Gallus_gallus
ENSLOCG00000003776	exosc1	100	62.000	ENSGAFG00000010265	exosc1	95	62.000	Gambusia_affinis
ENSLOCG00000003776	exosc1	100	63.000	ENSGACG00000018936	exosc1	100	63.000	Gasterosteus_aculeatus
ENSLOCG00000003776	exosc1	98	58.376	ENSGAGG00000019192	EXOSC1	98	58.376	Gopherus_agassizii
ENSLOCG00000003776	exosc1	98	61.714	ENSGGOG00000003099	EXOSC1	98	61.714	Gorilla_gorilla
ENSLOCG00000003776	exosc1	100	66.000	ENSHBUG00000017857	exosc1	100	66.000	Haplochromis_burtoni
ENSLOCG00000003776	exosc1	98	75.641	ENSHGLG00000016927	EXOSC1	97	75.641	Heterocephalus_glaber_female
ENSLOCG00000003776	exosc1	98	75.641	ENSHGLG00100012208	EXOSC1	97	75.641	Heterocephalus_glaber_male
ENSLOCG00000003776	exosc1	100	63.500	ENSHCOG00000019882	exosc1	100	63.500	Hippocampus_comes
ENSLOCG00000003776	exosc1	94	85.906	ENSIPUG00000007685	exosc1	95	85.906	Ictalurus_punctatus
ENSLOCG00000003776	exosc1	99	73.885	ENSSTOG00000006615	EXOSC1	98	73.885	Ictidomys_tridecemlineatus
ENSLOCG00000003776	exosc1	99	58.081	ENSJJAG00000013311	Exosc1	98	58.081	Jaculus_jaculus
ENSLOCG00000003776	exosc1	100	65.169	ENSKMAG00000001202	exosc1	82	65.169	Kryptolebias_marmoratus
ENSLOCG00000003776	exosc1	100	69.945	ENSLBEG00000011448	exosc1	100	69.945	Labrus_bergylta
ENSLOCG00000003776	exosc1	99	59.596	ENSLAFG00000015983	EXOSC1	98	59.596	Loxodonta_africana
ENSLOCG00000003776	exosc1	98	75.641	ENSMFAG00000001493	EXOSC1	97	75.641	Macaca_fascicularis
ENSLOCG00000003776	exosc1	98	75.641	ENSMMUG00000020028	EXOSC1	97	75.641	Macaca_mulatta
ENSLOCG00000003776	exosc1	98	61.714	ENSMNEG00000029816	EXOSC1	98	61.714	Macaca_nemestrina
ENSLOCG00000003776	exosc1	98	75.641	ENSMLEG00000027643	EXOSC1	97	75.641	Mandrillus_leucophaeus
ENSLOCG00000003776	exosc1	100	66.500	ENSMAMG00000012200	exosc1	100	66.500	Mastacembelus_armatus
ENSLOCG00000003776	exosc1	94	83.221	ENSMZEG00005007042	exosc1	95	83.221	Maylandia_zebra
ENSLOCG00000003776	exosc1	98	60.571	ENSMAUG00000020462	-	98	60.571	Mesocricetus_auratus
ENSLOCG00000003776	exosc1	99	74.522	ENSMICG00000007664	EXOSC1	98	74.522	Microcebus_murinus
ENSLOCG00000003776	exosc1	99	74.522	ENSMOCG00000006004	-	98	74.522	Microtus_ochrogaster
ENSLOCG00000003776	exosc1	97	60.526	ENSMOCG00000017124	-	97	60.526	Microtus_ochrogaster
ENSLOCG00000003776	exosc1	100	79.245	ENSMMOG00000021403	exosc1	100	79.245	Mola_mola
ENSLOCG00000003776	exosc1	99	60.101	ENSMODG00000004213	EXOSC1	98	60.101	Monodelphis_domestica
ENSLOCG00000003776	exosc1	94	65.445	ENSMALG00000007061	exosc1	93	65.445	Monopterus_albus
ENSLOCG00000003776	exosc1	99	74.522	MGP_CAROLIEiJ_G0022959	Exosc1	98	74.522	Mus_caroli
ENSLOCG00000003776	exosc1	99	74.522	ENSMUSG00000034321	Exosc1	98	74.522	Mus_musculus
ENSLOCG00000003776	exosc1	99	74.522	MGP_PahariEiJ_G0014449	Exosc1	98	74.522	Mus_pahari
ENSLOCG00000003776	exosc1	99	74.522	MGP_SPRETEiJ_G0023880	Exosc1	98	74.522	Mus_spretus
ENSLOCG00000003776	exosc1	99	58.586	ENSMPUG00000017044	EXOSC1	98	58.586	Mustela_putorius_furo
ENSLOCG00000003776	exosc1	99	59.091	ENSMLUG00000009228	EXOSC1	98	59.091	Myotis_lucifugus
ENSLOCG00000003776	exosc1	99	58.081	ENSNGAG00000022033	Exosc1	98	58.081	Nannospalax_galili
ENSLOCG00000003776	exosc1	100	83.019	ENSNBRG00000024007	exosc1	99	83.019	Neolamprologus_brichardi
ENSLOCG00000003776	exosc1	98	75.641	ENSNLEG00000013872	EXOSC1	97	75.641	Nomascus_leucogenys
ENSLOCG00000003776	exosc1	99	59.596	ENSOPRG00000005065	EXOSC1	98	59.596	Ochotona_princeps
ENSLOCG00000003776	exosc1	99	75.159	ENSODEG00000016709	EXOSC1	98	75.159	Octodon_degus
ENSLOCG00000003776	exosc1	100	65.500	ENSONIG00000017683	exosc1	99	65.500	Oreochromis_niloticus
ENSLOCG00000003776	exosc1	59	81.915	ENSOANG00000006563	EXOSC1	70	81.915	Ornithorhynchus_anatinus
ENSLOCG00000003776	exosc1	99	55.051	ENSOCUG00000026461	-	98	55.051	Oryctolagus_cuniculus
ENSLOCG00000003776	exosc1	99	58.291	ENSOCUG00000011898	-	98	58.291	Oryctolagus_cuniculus
ENSLOCG00000003776	exosc1	100	62.000	ENSORLG00000011595	exosc1	100	62.000	Oryzias_latipes
ENSLOCG00000003776	exosc1	100	62.000	ENSORLG00020005831	exosc1	100	62.000	Oryzias_latipes_hni
ENSLOCG00000003776	exosc1	100	61.500	ENSORLG00015004317	exosc1	100	61.500	Oryzias_latipes_hsok
ENSLOCG00000003776	exosc1	100	69.231	ENSOMEG00000013907	exosc1	99	69.231	Oryzias_melastigma
ENSLOCG00000003776	exosc1	99	58.586	ENSOGAG00000016259	EXOSC1	98	58.586	Otolemur_garnettii
ENSLOCG00000003776	exosc1	99	58.586	ENSOARG00000010136	EXOSC1	98	58.586	Ovis_aries
ENSLOCG00000003776	exosc1	98	75.641	ENSPPAG00000039842	EXOSC1	97	75.641	Pan_paniscus
ENSLOCG00000003776	exosc1	98	61.143	ENSPPRG00000023366	EXOSC1	98	61.143	Panthera_pardus
ENSLOCG00000003776	exosc1	98	61.143	ENSPTIG00000017701	EXOSC1	98	61.143	Panthera_tigris_altaica
ENSLOCG00000003776	exosc1	98	75.641	ENSPTRG00000002808	EXOSC1	97	75.641	Pan_troglodytes
ENSLOCG00000003776	exosc1	98	75.641	ENSPANG00000021324	EXOSC1	97	75.641	Papio_anubis
ENSLOCG00000003776	exosc1	100	77.987	ENSPKIG00000016037	exosc1	99	77.987	Paramormyrops_kingsleyae
ENSLOCG00000003776	exosc1	89	50.259	ENSPSIG00000013571	EXOSC1	65	81.395	Pelodiscus_sinensis
ENSLOCG00000003776	exosc1	100	65.341	ENSPMGG00000014002	exosc1	100	65.341	Periophthalmus_magnuspinnatus
ENSLOCG00000003776	exosc1	99	74.522	ENSPEMG00000010710	-	98	74.522	Peromyscus_maniculatus_bairdii
ENSLOCG00000003776	exosc1	95	52.332	ENSPMAG00000000195	exosc1	95	52.332	Petromyzon_marinus
ENSLOCG00000003776	exosc1	99	59.091	ENSPCIG00000002210	EXOSC1	97	59.091	Phascolarctos_cinereus
ENSLOCG00000003776	exosc1	100	62.000	ENSPFOG00000006755	exosc1	95	62.000	Poecilia_formosa
ENSLOCG00000003776	exosc1	100	62.000	ENSPLAG00000005880	exosc1	100	62.000	Poecilia_latipinna
ENSLOCG00000003776	exosc1	100	62.000	ENSPMEG00000015598	exosc1	95	62.000	Poecilia_mexicana
ENSLOCG00000003776	exosc1	100	62.500	ENSPREG00000000405	exosc1	94	62.500	Poecilia_reticulata
ENSLOCG00000003776	exosc1	99	59.596	ENSPPYG00000002531	EXOSC1	98	59.596	Pongo_abelii
ENSLOCG00000003776	exosc1	99	59.091	ENSPCAG00000009135	EXOSC1	98	59.091	Procavia_capensis
ENSLOCG00000003776	exosc1	99	63.804	ENSPCOG00000027539	EXOSC1	98	63.804	Propithecus_coquereli
ENSLOCG00000003776	exosc1	99	59.091	ENSPVAG00000003372	EXOSC1	98	59.091	Pteropus_vampyrus
ENSLOCG00000003776	exosc1	100	67.614	ENSPNYG00000021745	exosc1	99	67.614	Pundamilia_nyererei
ENSLOCG00000003776	exosc1	100	69.000	ENSPNAG00000001944	exosc1	100	69.000	Pygocentrus_nattereri
ENSLOCG00000003776	exosc1	99	74.522	ENSRNOG00000048708	Exosc1	98	74.522	Rattus_norvegicus
ENSLOCG00000003776	exosc1	98	75.641	ENSRBIG00000035618	EXOSC1	97	75.641	Rhinopithecus_bieti
ENSLOCG00000003776	exosc1	98	75.641	ENSRROG00000032589	EXOSC1	97	75.641	Rhinopithecus_roxellana
ENSLOCG00000003776	exosc1	98	61.143	ENSSBOG00000000359	EXOSC1	98	61.143	Saimiri_boliviensis_boliviensis
ENSLOCG00000003776	exosc1	70	60.526	ENSSHAG00000018219	EXOSC1	100	60.526	Sarcophilus_harrisii
ENSLOCG00000003776	exosc1	100	68.000	ENSSFOG00015009069	exosc1	100	68.000	Scleropages_formosus
ENSLOCG00000003776	exosc1	100	65.500	ENSSFOG00015016289	-	100	65.500	Scleropages_formosus
ENSLOCG00000003776	exosc1	100	82.390	ENSSMAG00000003721	exosc1	99	82.390	Scophthalmus_maximus
ENSLOCG00000003776	exosc1	100	65.217	ENSSDUG00000002993	exosc1	100	65.000	Seriola_dumerili
ENSLOCG00000003776	exosc1	100	65.217	ENSSLDG00000025181	exosc1	100	65.000	Seriola_lalandi_dorsalis
ENSLOCG00000003776	exosc1	98	54.315	ENSSARG00000000162	EXOSC1	98	54.315	Sorex_araneus
ENSLOCG00000003776	exosc1	98	57.360	ENSSPUG00000012263	EXOSC1	98	57.360	Sphenodon_punctatus
ENSLOCG00000003776	exosc1	100	65.761	ENSSPAG00000016792	exosc1	83	65.761	Stegastes_partitus
ENSLOCG00000003776	exosc1	98	57.868	ENSSSCG00000010518	EXOSC1	89	57.868	Sus_scrofa
ENSLOCG00000003776	exosc1	98	59.391	ENSTGUG00000009692	EXOSC1	98	59.391	Taeniopygia_guttata
ENSLOCG00000003776	exosc1	100	57.000	ENSTRUG00000007706	exosc1	100	57.000	Takifugu_rubripes
ENSLOCG00000003776	exosc1	100	57.500	ENSTNIG00000014079	exosc1	99	57.500	Tetraodon_nigroviridis
ENSLOCG00000003776	exosc1	98	55.102	ENSTBEG00000006011	EXOSC1	98	55.102	Tupaia_belangeri
ENSLOCG00000003776	exosc1	94	58.947	ENSTTRG00000009887	EXOSC1	100	58.947	Tursiops_truncatus
ENSLOCG00000003776	exosc1	99	66.038	ENSUAMG00000010266	EXOSC1	98	66.038	Ursus_americanus
ENSLOCG00000003776	exosc1	99	65.823	ENSUMAG00000022002	EXOSC1	98	65.823	Ursus_maritimus
ENSLOCG00000003776	exosc1	98	58.376	ENSVVUG00000023192	EXOSC1	62	58.376	Vulpes_vulpes
ENSLOCG00000003776	exosc1	100	58.500	ENSXETG00000003434	exosc1	100	58.500	Xenopus_tropicalis
ENSLOCG00000003776	exosc1	60	78.947	ENSXCOG00000014499	exosc1	68	78.947	Xiphophorus_couchianus
ENSLOCG00000003776	exosc1	100	62.500	ENSXMAG00000023382	exosc1	94	62.500	Xiphophorus_maculatus