EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003846 (Gene tree)
Gene ID: 102687077
Gene Symbol: rrp12
Alias: im:7142677|im:7149218|zgc:111822
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 22839 bases
Position: chrLG5:4554001-4576839
Accession: 102687077
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004603	NUC173	PF08161.12	3.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004611	-	8094	XM_006630306	ENSLOCP00000004603	1284 (aa)	-	W5M895

Gene Model

Click here to download ENSLOCG00000003846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003846	rrp12	97	65.934	ENSG00000052749	RRP12	98	79.365	Homo_sapiens
ENSLOCG00000003846	rrp12	99	70.031	ENSAPOG00000013355	rrp12	100	69.954	Acanthochromis_polyacanthus
ENSLOCG00000003846	rrp12	99	62.414	ENSAMEG00000000134	RRP12	99	62.490	Ailuropoda_melanoleuca
ENSLOCG00000003846	rrp12	99	70.185	ENSACIG00000022673	rrp12	100	70.359	Amphilophus_citrinellus
ENSLOCG00000003846	rrp12	99	72.097	ENSAOCG00000016149	rrp12	100	72.080	Amphiprion_ocellaris
ENSLOCG00000003846	rrp12	99	70.692	ENSAPEG00000016023	rrp12	100	70.763	Amphiprion_percula
ENSLOCG00000003846	rrp12	99	70.973	ENSATEG00000022627	rrp12	100	70.888	Anabas_testudineus
ENSLOCG00000003846	rrp12	96	59.091	ENSAPLG00000014387	RRP12	99	59.410	Anas_platyrhynchos
ENSLOCG00000003846	rrp12	99	58.597	ENSACAG00000002175	RRP12	99	58.751	Anolis_carolinensis
ENSLOCG00000003846	rrp12	92	73.684	ENSANAG00000037485	RRP12	99	73.684	Aotus_nancymaae
ENSLOCG00000003846	rrp12	99	69.653	ENSACLG00000007354	rrp12	100	70.260	Astatotilapia_calliptera
ENSLOCG00000003846	rrp12	100	68.944	ENSAMXG00000012852	rrp12	100	68.944	Astyanax_mexicanus
ENSLOCG00000003846	rrp12	97	67.045	ENSBTAG00000002191	RRP12	99	67.045	Bos_taurus
ENSLOCG00000003846	rrp12	85	59.982	ENSCJAG00000016549	-	99	60.055	Callithrix_jacchus
ENSLOCG00000003846	rrp12	99	62.932	ENSCAFG00000009043	RRP12	99	62.932	Canis_familiaris
ENSLOCG00000003846	rrp12	99	62.932	ENSCAFG00020005991	RRP12	99	62.932	Canis_lupus_dingo
ENSLOCG00000003846	rrp12	99	59.695	ENSCHIG00000011876	RRP12	99	59.695	Capra_hircus
ENSLOCG00000003846	rrp12	53	58.646	ENSTSYG00000030210	-	99	58.934	Carlito_syrichta
ENSLOCG00000003846	rrp12	96	55.671	ENSCAPG00000008991	RRP12	98	55.866	Cavia_aperea
ENSLOCG00000003846	rrp12	100	62.143	ENSCPOG00000004215	RRP12	100	62.327	Cavia_porcellus
ENSLOCG00000003846	rrp12	70	56.175	ENSCCAG00000033123	-	82	56.175	Cebus_capucinus
ENSLOCG00000003846	rrp12	76	67.176	ENSCCAG00000024088	RRP12	99	70.161	Cebus_capucinus
ENSLOCG00000003846	rrp12	99	59.954	ENSCATG00000045310	RRP12	99	59.893	Cercocebus_atys
ENSLOCG00000003846	rrp12	100	61.864	ENSCLAG00000003753	RRP12	100	62.308	Chinchilla_lanigera
ENSLOCG00000003846	rrp12	88	60.714	ENSCSAG00000005877	RRP12	99	60.976	Chlorocebus_sabaeus
ENSLOCG00000003846	rrp12	59	65.724	ENSCHOG00000003095	-	61	65.724	Choloepus_hoffmanni
ENSLOCG00000003846	rrp12	94	63.584	ENSCPBG00000011935	RRP12	97	63.779	Chrysemys_picta_bellii
ENSLOCG00000003846	rrp12	58	40.052	ENSCSAVG00000006059	-	90	40.052	Ciona_savignyi
ENSLOCG00000003846	rrp12	92	75.000	ENSCANG00000031653	RRP12	99	62.510	Colobus_angolensis_palliatus
ENSLOCG00000003846	rrp12	90	62.222	ENSCGRG00001004338	Rrp12	99	62.287	Cricetulus_griseus_chok1gshd
ENSLOCG00000003846	rrp12	99	62.037	ENSCGRG00000011965	Rrp12	99	62.096	Cricetulus_griseus_crigri
ENSLOCG00000003846	rrp12	99	68.952	ENSCSEG00000007799	rrp12	99	69.207	Cynoglossus_semilaevis
ENSLOCG00000003846	rrp12	99	71.005	ENSCVAG00000003418	rrp12	100	70.898	Cyprinodon_variegatus
ENSLOCG00000003846	rrp12	100	67.871	ENSDARG00000022410	rrp12	100	68.178	Danio_rerio
ENSLOCG00000003846	rrp12	99	61.497	ENSDNOG00000005120	RRP12	99	62.114	Dasypus_novemcinctus
ENSLOCG00000003846	rrp12	99	62.251	ENSDORG00000009199	Rrp12	99	62.596	Dipodomys_ordii
ENSLOCG00000003846	rrp12	91	67.647	ENSETEG00000002455	RRP12	92	67.647	Echinops_telfairi
ENSLOCG00000003846	rrp12	89	60.526	ENSEBUG00000006555	rrp12	90	48.522	Eptatretus_burgeri
ENSLOCG00000003846	rrp12	99	63.020	ENSEASG00005008693	RRP12	99	63.097	Equus_asinus_asinus
ENSLOCG00000003846	rrp12	94	62.963	ENSECAG00000010892	RRP12	99	63.045	Equus_caballus
ENSLOCG00000003846	rrp12	64	62.941	ENSEEUG00000005447	-	64	62.941	Erinaceus_europaeus
ENSLOCG00000003846	rrp12	99	68.942	ENSELUG00000010510	rrp12	99	68.913	Esox_lucius
ENSLOCG00000003846	rrp12	92	75.000	ENSFCAG00000028639	RRP12	99	63.105	Felis_catus
ENSLOCG00000003846	rrp12	93	62.032	ENSFALG00000008458	RRP12	99	62.198	Ficedula_albicollis
ENSLOCG00000003846	rrp12	99	62.221	ENSFDAG00000019108	RRP12	95	62.404	Fukomys_damarensis
ENSLOCG00000003846	rrp12	99	65.528	ENSFHEG00000004148	rrp12	100	65.254	Fundulus_heteroclitus
ENSLOCG00000003846	rrp12	99	62.074	ENSGMOG00000004188	rrp12	99	62.307	Gadus_morhua
ENSLOCG00000003846	rrp12	99	62.733	ENSGALG00000041331	RRP12	96	63.288	Gallus_gallus
ENSLOCG00000003846	rrp12	99	70.824	ENSGAFG00000009038	rrp12	100	70.817	Gambusia_affinis
ENSLOCG00000003846	rrp12	99	68.069	ENSGACG00000007175	rrp12	100	68.083	Gasterosteus_aculeatus
ENSLOCG00000003846	rrp12	67	64.937	ENSGAGG00000019169	RRP12	96	64.937	Gopherus_agassizii
ENSLOCG00000003846	rrp12	97	65.934	ENSGGOG00000014850	RRP12	99	62.538	Gorilla_gorilla
ENSLOCG00000003846	rrp12	99	70.039	ENSHBUG00000023527	rrp12	100	70.642	Haplochromis_burtoni
ENSLOCG00000003846	rrp12	99	62.018	ENSHGLG00000016772	RRP12	99	62.404	Heterocephalus_glaber_female
ENSLOCG00000003846	rrp12	99	62.018	ENSHGLG00100015110	RRP12	99	62.404	Heterocephalus_glaber_male
ENSLOCG00000003846	rrp12	100	66.949	ENSHCOG00000019519	rrp12	100	66.949	Hippocampus_comes
ENSLOCG00000003846	rrp12	100	68.021	ENSIPUG00000000311	RRP12	100	68.021	Ictalurus_punctatus
ENSLOCG00000003846	rrp12	99	63.048	ENSSTOG00000006515	RRP12	99	63.433	Ictidomys_tridecemlineatus
ENSLOCG00000003846	rrp12	96	62.270	ENSJJAG00000000110	Rrp12	99	62.360	Jaculus_jaculus
ENSLOCG00000003846	rrp12	99	70.270	ENSKMAG00000020621	rrp12	100	70.843	Kryptolebias_marmoratus
ENSLOCG00000003846	rrp12	100	68.087	ENSLBEG00000015335	rrp12	100	68.136	Labrus_bergylta
ENSLOCG00000003846	rrp12	72	68.539	ENSLACG00000016633	RRP12	81	68.539	Latimeria_chalumnae
ENSLOCG00000003846	rrp12	99	62.901	ENSLAFG00000015965	RRP12	99	62.748	Loxodonta_africana
ENSLOCG00000003846	rrp12	92	74.342	ENSMFAG00000041558	RRP12	99	62.510	Macaca_fascicularis
ENSLOCG00000003846	rrp12	92	74.342	ENSMMUG00000019634	RRP12	99	62.730	Macaca_mulatta
ENSLOCG00000003846	rrp12	92	74.342	ENSMNEG00000036759	RRP12	99	59.755	Macaca_nemestrina
ENSLOCG00000003846	rrp12	92	75.000	ENSMLEG00000041317	RRP12	99	60.353	Mandrillus_leucophaeus
ENSLOCG00000003846	rrp12	99	69.082	ENSMAMG00000002964	rrp12	99	70.905	Mastacembelus_armatus
ENSLOCG00000003846	rrp12	99	69.807	ENSMZEG00005003241	rrp12	100	70.413	Maylandia_zebra
ENSLOCG00000003846	rrp12	99	60.555	ENSMGAG00000009829	RRP12	99	60.555	Meleagris_gallopavo
ENSLOCG00000003846	rrp12	99	60.555	ENSMAUG00000020743	Rrp12	99	60.462	Mesocricetus_auratus
ENSLOCG00000003846	rrp12	92	75.817	ENSMICG00000007624	RRP12	99	69.143	Microcebus_murinus
ENSLOCG00000003846	rrp12	100	62.231	ENSMOCG00000006753	Rrp12	100	62.289	Microtus_ochrogaster
ENSLOCG00000003846	rrp12	100	68.702	ENSMMOG00000010708	rrp12	100	68.702	Mola_mola
ENSLOCG00000003846	rrp12	99	62.074	ENSMODG00000004315	RRP12	99	62.452	Monodelphis_domestica
ENSLOCG00000003846	rrp12	99	65.397	ENSMALG00000016560	rrp12	99	69.628	Monopterus_albus
ENSLOCG00000003846	rrp12	99	61.850	MGP_CAROLIEiJ_G0022957	Rrp12	99	61.774	Mus_caroli
ENSLOCG00000003846	rrp12	99	62.096	ENSMUSG00000035049	Rrp12	99	62.018	Mus_musculus
ENSLOCG00000003846	rrp12	100	62.587	MGP_PahariEiJ_G0014447	Rrp12	100	62.510	Mus_pahari
ENSLOCG00000003846	rrp12	99	62.327	MGP_SPRETEiJ_G0023878	Rrp12	99	62.250	Mus_spretus
ENSLOCG00000003846	rrp12	99	62.231	ENSMPUG00000017046	RRP12	99	62.231	Mustela_putorius_furo
ENSLOCG00000003846	rrp12	99	62.701	ENSMLUG00000017160	RRP12	99	62.701	Myotis_lucifugus
ENSLOCG00000003846	rrp12	99	61.864	ENSNGAG00000024144	Rrp12	99	62.018	Nannospalax_galili
ENSLOCG00000003846	rrp12	99	68.803	ENSNBRG00000009987	rrp12	100	69.013	Neolamprologus_brichardi
ENSLOCG00000003846	rrp12	90	73.982	ENSNLEG00000013762	RRP12	95	73.756	Nomascus_leucogenys
ENSLOCG00000003846	rrp12	100	56.646	ENSMEUG00000003185	RRP12	100	56.788	Notamacropus_eugenii
ENSLOCG00000003846	rrp12	89	73.279	ENSOPRG00000005001	RRP12	89	73.279	Ochotona_princeps
ENSLOCG00000003846	rrp12	100	61.687	ENSODEG00000016439	RRP12	100	62.026	Octodon_degus
ENSLOCG00000003846	rrp12	99	69.961	ENSONIG00000009528	rrp12	100	70.642	Oreochromis_niloticus
ENSLOCG00000003846	rrp12	100	58.634	ENSOANG00000006560	RRP12	100	58.711	Ornithorhynchus_anatinus
ENSLOCG00000003846	rrp12	99	62.152	ENSOCUG00000005662	RRP12	99	62.771	Oryctolagus_cuniculus
ENSLOCG00000003846	rrp12	99	69.498	ENSORLG00000008688	rrp12	99	69.479	Oryzias_latipes
ENSLOCG00000003846	rrp12	97	69.340	ENSORLG00020002355	rrp12	99	69.340	Oryzias_latipes_hni
ENSLOCG00000003846	rrp12	99	69.653	ENSORLG00015006709	rrp12	99	69.632	Oryzias_latipes_hsok
ENSLOCG00000003846	rrp12	97	69.890	ENSOMEG00000002609	rrp12	99	69.890	Oryzias_melastigma
ENSLOCG00000003846	rrp12	99	62.366	ENSOGAG00000001626	RRP12	99	62.519	Otolemur_garnettii
ENSLOCG00000003846	rrp12	99	60.753	ENSOARG00000009681	RRP12	99	60.906	Ovis_aries
ENSLOCG00000003846	rrp12	97	65.934	ENSPPAG00000043885	RRP12	100	62.040	Pan_paniscus
ENSLOCG00000003846	rrp12	92	74.342	ENSPPRG00000002029	RRP12	99	62.875	Panthera_pardus
ENSLOCG00000003846	rrp12	92	75.000	ENSPTIG00000004428	RRP12	99	59.429	Panthera_tigris_altaica
ENSLOCG00000003846	rrp12	97	65.934	ENSPTRG00000002806	RRP12	100	62.117	Pan_troglodytes
ENSLOCG00000003846	rrp12	92	75.000	ENSPANG00000021360	RRP12	99	62.510	Papio_anubis
ENSLOCG00000003846	rrp12	100	70.773	ENSPKIG00000016516	rrp12	99	71.079	Paramormyrops_kingsleyae
ENSLOCG00000003846	rrp12	99	69.075	ENSPMGG00000020217	rrp12	100	68.697	Periophthalmus_magnuspinnatus
ENSLOCG00000003846	rrp12	100	62.750	ENSPEMG00000008437	Rrp12	99	62.826	Peromyscus_maniculatus_bairdii
ENSLOCG00000003846	rrp12	99	44.403	ENSPMAG00000007493	rrp12	99	45.386	Petromyzon_marinus
ENSLOCG00000003846	rrp12	99	62.606	ENSPCIG00000002157	RRP12	100	62.665	Phascolarctos_cinereus
ENSLOCG00000003846	rrp12	99	70.139	ENSPFOG00000014975	rrp12	100	70.138	Poecilia_formosa
ENSLOCG00000003846	rrp12	99	69.907	ENSPLAG00000009840	rrp12	100	69.908	Poecilia_latipinna
ENSLOCG00000003846	rrp12	99	70.293	ENSPMEG00000021871	rrp12	100	70.291	Poecilia_mexicana
ENSLOCG00000003846	rrp12	99	67.613	ENSPREG00000020950	rrp12	100	67.757	Poecilia_reticulata
ENSLOCG00000003846	rrp12	99	61.828	ENSPPYG00000002528	RRP12	99	61.828	Pongo_abelii
ENSLOCG00000003846	rrp12	94	76.836	ENSPCAG00000008967	RRP12	94	76.836	Procavia_capensis
ENSLOCG00000003846	rrp12	92	75.658	ENSPCOG00000014009	RRP12	99	63.320	Propithecus_coquereli
ENSLOCG00000003846	rrp12	99	59.507	ENSPVAG00000003370	RRP12	100	59.507	Pteropus_vampyrus
ENSLOCG00000003846	rrp12	99	70.039	ENSPNYG00000009451	rrp12	100	70.642	Pundamilia_nyererei
ENSLOCG00000003846	rrp12	93	83.673	ENSPNAG00000007658	rrp12	100	70.209	Pygocentrus_nattereri
ENSLOCG00000003846	rrp12	99	62.760	ENSRNOG00000048495	Rrp12	99	62.760	Rattus_norvegicus
ENSLOCG00000003846	rrp12	92	75.000	ENSRBIG00000021296	RRP12	99	72.500	Rhinopithecus_bieti
ENSLOCG00000003846	rrp12	92	75.000	ENSRROG00000032482	RRP12	99	72.500	Rhinopithecus_roxellana
ENSLOCG00000003846	rrp12	92	74.510	ENSSBOG00000030992	RRP12	99	74.510	Saimiri_boliviensis_boliviensis
ENSLOCG00000003846	rrp12	99	61.938	ENSSHAG00000018275	RRP12	99	62.403	Sarcophilus_harrisii
ENSLOCG00000003846	rrp12	99	72.790	ENSSFOG00015016400	rrp12	99	72.790	Scleropages_formosus
ENSLOCG00000003846	rrp12	99	70.525	ENSSMAG00000004047	rrp12	100	70.665	Scophthalmus_maximus
ENSLOCG00000003846	rrp12	99	71.707	ENSSDUG00000022871	rrp12	100	71.694	Seriola_dumerili
ENSLOCG00000003846	rrp12	99	71.395	ENSSLDG00000003038	rrp12	100	71.384	Seriola_lalandi_dorsalis
ENSLOCG00000003846	rrp12	99	59.938	ENSSPUG00000012221	RRP12	99	60.015	Sphenodon_punctatus
ENSLOCG00000003846	rrp12	99	71.707	ENSSPAG00000002261	rrp12	100	71.694	Stegastes_partitus
ENSLOCG00000003846	rrp12	100	62.433	ENSSSCG00000010514	RRP12	100	62.433	Sus_scrofa
ENSLOCG00000003846	rrp12	88	58.999	ENSTGUG00000009711	RRP12	99	58.736	Taeniopygia_guttata
ENSLOCG00000003846	rrp12	100	66.203	ENSTRUG00000012017	rrp12	100	65.816	Takifugu_rubripes
ENSLOCG00000003846	rrp12	100	70.588	ENSTNIG00000016522	rrp12	100	70.743	Tetraodon_nigroviridis
ENSLOCG00000003846	rrp12	77	75.862	ENSTBEG00000004907	RRP12	80	75.862	Tupaia_belangeri
ENSLOCG00000003846	rrp12	100	60.585	ENSTTRG00000009878	RRP12	100	60.816	Tursiops_truncatus
ENSLOCG00000003846	rrp12	99	62.471	ENSUAMG00000009092	RRP12	99	62.471	Ursus_americanus
ENSLOCG00000003846	rrp12	99	60.293	ENSUMAG00000021621	RRP12	99	60.725	Ursus_maritimus
ENSLOCG00000003846	rrp12	99	63.080	ENSVVUG00000023168	RRP12	99	63.080	Vulpes_vulpes
ENSLOCG00000003846	rrp12	99	63.601	ENSXETG00000003430	rrp12	99	63.679	Xenopus_tropicalis
ENSLOCG00000003846	rrp12	90	69.617	ENSXCOG00000012082	rrp12	97	69.492	Xiphophorus_couchianus
ENSLOCG00000003846	rrp12	99	70.856	ENSXMAG00000013498	rrp12	100	70.849	Xiphophorus_maculatus