EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000003860 (Gene tree)
Gene ID: 102694381
Gene Symbol: mrpl54
Alias: si:dkeyp-70f9.5
Full Name: mitochondrial ribosomal protein L54
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4815 bases
Position: chrLG19:5510524-5515338
Accession: 102694381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004607	Ribosomal_L37	PF08561.10	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004615	-	417	XM_006639996	ENSLOCP00000004607	138 (aa)	XP_006640059	W5M899

Gene Model

Click here to download ENSLOCG00000003860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000003860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003860	mrpl54	91	57.463	ENSG00000183617	MRPL54	64	63.636	Homo_sapiens
ENSLOCG00000003860	mrpl54	96	60.448	ENSAPOG00000022643	mrpl54	79	66.972	Acanthochromis_polyacanthus
ENSLOCG00000003860	mrpl54	91	54.815	ENSAMEG00000005908	MRPL54	64	64.773	Ailuropoda_melanoleuca
ENSLOCG00000003860	mrpl54	80	69.369	ENSACIG00000006438	mrpl54	80	69.369	Amphilophus_citrinellus
ENSLOCG00000003860	mrpl54	79	66.972	ENSAOCG00000006430	mrpl54	79	66.972	Amphiprion_ocellaris
ENSLOCG00000003860	mrpl54	79	66.972	ENSAPEG00000023406	mrpl54	79	66.972	Amphiprion_percula
ENSLOCG00000003860	mrpl54	99	56.522	ENSATEG00000004969	mrpl54	80	65.766	Anabas_testudineus
ENSLOCG00000003860	mrpl54	72	57.576	ENSACAG00000017747	-	80	56.977	Anolis_carolinensis
ENSLOCG00000003860	mrpl54	93	58.824	ENSANAG00000028692	MRPL54	64	67.045	Aotus_nancymaae
ENSLOCG00000003860	mrpl54	80	70.270	ENSACLG00000001877	mrpl54	80	70.270	Astatotilapia_calliptera
ENSLOCG00000003860	mrpl54	62	70.588	ENSAMXG00000018143	mrpl54	62	70.455	Astyanax_mexicanus
ENSLOCG00000003860	mrpl54	78	58.182	ENSBTAG00000008396	MRPL54	63	65.517	Bos_taurus
ENSLOCG00000003860	mrpl54	55	41.975	WBGene00009128	mrpl-54	59	41.975	Caenorhabditis_elegans
ENSLOCG00000003860	mrpl54	93	58.824	ENSCJAG00000014998	MRPL54	64	67.045	Callithrix_jacchus
ENSLOCG00000003860	mrpl54	91	52.985	ENSCAFG00000019192	MRPL54	64	62.500	Canis_familiaris
ENSLOCG00000003860	mrpl54	91	52.985	ENSCAFG00020018333	MRPL54	64	62.500	Canis_lupus_dingo
ENSLOCG00000003860	mrpl54	79	58.036	ENSCHIG00000026538	MRPL54	63	65.517	Capra_hircus
ENSLOCG00000003860	mrpl54	67	66.316	ENSCAPG00000012166	MRPL54	89	67.059	Cavia_aperea
ENSLOCG00000003860	mrpl54	80	61.947	ENSCPOG00000031082	MRPL54	62	67.059	Cavia_porcellus
ENSLOCG00000003860	mrpl54	93	56.618	ENSCCAG00000000138	MRPL54	64	63.636	Cebus_capucinus
ENSLOCG00000003860	mrpl54	78	62.727	ENSCATG00000014066	MRPL54	62	67.059	Cercocebus_atys
ENSLOCG00000003860	mrpl54	91	56.489	ENSCLAG00000007908	MRPL54	95	57.812	Chinchilla_lanigera
ENSLOCG00000003860	mrpl54	93	55.147	ENSCSAG00000010950	MRPL54	62	67.059	Chlorocebus_sabaeus
ENSLOCG00000003860	mrpl54	78	61.682	ENSCPBG00000017103	MRPL54	61	61.682	Chrysemys_picta_bellii
ENSLOCG00000003860	mrpl54	56	38.961	ENSCING00000019896	-	54	38.961	Ciona_intestinalis
ENSLOCG00000003860	mrpl54	65	37.778	ENSCSAVG00000009604	-	59	37.647	Ciona_savignyi
ENSLOCG00000003860	mrpl54	95	55.396	ENSCANG00000027841	MRPL54	64	65.909	Colobus_angolensis_palliatus
ENSLOCG00000003860	mrpl54	99	55.714	ENSCGRG00001019482	Mrpl54	64	64.773	Cricetulus_griseus_chok1gshd
ENSLOCG00000003860	mrpl54	99	55.714	ENSCGRG00000010923	Mrpl54	64	64.773	Cricetulus_griseus_crigri
ENSLOCG00000003860	mrpl54	80	60.360	ENSCSEG00000019883	mrpl54	74	60.360	Cynoglossus_semilaevis
ENSLOCG00000003860	mrpl54	80	69.369	ENSCVAG00000002210	mrpl54	79	69.369	Cyprinodon_variegatus
ENSLOCG00000003860	mrpl54	99	49.635	ENSDARG00000071468	mrpl54	65	57.955	Danio_rerio
ENSLOCG00000003860	mrpl54	89	51.908	ENSDNOG00000007387	MRPL54	63	59.302	Dasypus_novemcinctus
ENSLOCG00000003860	mrpl54	64	65.909	ENSDORG00000005326	Mrpl54	66	65.909	Dipodomys_ordii
ENSLOCG00000003860	mrpl54	57	39.744	FBgn0034579	mRpL54	59	39.744	Drosophila_melanogaster
ENSLOCG00000003860	mrpl54	78	58.559	ENSETEG00000017500	MRPL54	66	60.227	Echinops_telfairi
ENSLOCG00000003860	mrpl54	68	54.255	ENSEBUG00000003179	mrpl54	75	54.023	Eptatretus_burgeri
ENSLOCG00000003860	mrpl54	78	59.091	ENSEASG00005022283	MRPL54	64	64.368	Equus_asinus_asinus
ENSLOCG00000003860	mrpl54	78	59.091	ENSECAG00000001515	MRPL54	64	64.368	Equus_caballus
ENSLOCG00000003860	mrpl54	96	63.910	ENSELUG00000022358	mrpl54	89	66.667	Esox_lucius
ENSLOCG00000003860	mrpl54	99	52.857	ENSFCAG00000007144	MRPL54	64	64.773	Felis_catus
ENSLOCG00000003860	mrpl54	70	62.500	ENSFALG00000011660	MRPL54	80	61.628	Ficedula_albicollis
ENSLOCG00000003860	mrpl54	78	58.559	ENSFDAG00000020803	MRPL54	64	62.500	Fukomys_damarensis
ENSLOCG00000003860	mrpl54	75	56.731	ENSGALG00000027611	MRPL54	86	56.731	Gallus_gallus
ENSLOCG00000003860	mrpl54	80	64.865	ENSGAFG00000016193	mrpl54	80	64.865	Gambusia_affinis
ENSLOCG00000003860	mrpl54	70	64.583	ENSGAGG00000020238	MRPL54	68	65.116	Gopherus_agassizii
ENSLOCG00000003860	mrpl54	91	58.955	ENSGGOG00000014722	MRPL54	64	65.909	Gorilla_gorilla
ENSLOCG00000003860	mrpl54	80	70.270	ENSHBUG00000009028	mrpl54	66	70.270	Haplochromis_burtoni
ENSLOCG00000003860	mrpl54	78	59.259	ENSHGLG00000006157	MRPL54	66	61.364	Heterocephalus_glaber_female
ENSLOCG00000003860	mrpl54	78	59.259	ENSHGLG00100000788	MRPL54	66	61.364	Heterocephalus_glaber_male
ENSLOCG00000003860	mrpl54	100	50.725	ENSHCOG00000000536	mrpl54	81	58.261	Hippocampus_comes
ENSLOCG00000003860	mrpl54	98	65.441	ENSIPUG00000024854	mrpl54	87	70.248	Ictalurus_punctatus
ENSLOCG00000003860	mrpl54	70	65.625	ENSSTOG00000022378	MRPL54	90	68.182	Ictidomys_tridecemlineatus
ENSLOCG00000003860	mrpl54	78	63.393	ENSJJAG00000020405	Mrpl54	59	69.512	Jaculus_jaculus
ENSLOCG00000003860	mrpl54	100	51.799	ENSKMAG00000022310	mrpl54	85	55.372	Kryptolebias_marmoratus
ENSLOCG00000003860	mrpl54	99	58.394	ENSLBEG00000005935	mrpl54	83	65.789	Labrus_bergylta
ENSLOCG00000003860	mrpl54	73	70.297	ENSLACG00000013912	MRPL54	66	69.318	Latimeria_chalumnae
ENSLOCG00000003860	mrpl54	73	58.095	ENSLAFG00000029657	MRPL54	63	62.500	Loxodonta_africana
ENSLOCG00000003860	mrpl54	78	62.727	ENSMFAG00000003311	MRPL54	62	67.059	Macaca_fascicularis
ENSLOCG00000003860	mrpl54	78	62.727	ENSMMUG00000044080	MRPL54	62	67.059	Macaca_mulatta
ENSLOCG00000003860	mrpl54	78	62.727	ENSMNEG00000039499	MRPL54	62	67.059	Macaca_nemestrina
ENSLOCG00000003860	mrpl54	89	64.228	ENSMAMG00000003291	mrpl54	94	64.228	Mastacembelus_armatus
ENSLOCG00000003860	mrpl54	80	70.270	ENSMZEG00005009023	mrpl54	66	70.270	Maylandia_zebra
ENSLOCG00000003860	mrpl54	70	54.639	ENSMGAG00000000951	MRPL54	89	55.814	Meleagris_gallopavo
ENSLOCG00000003860	mrpl54	99	54.745	ENSMAUG00000009543	Mrpl54	65	68.182	Mesocricetus_auratus
ENSLOCG00000003860	mrpl54	62	64.706	ENSMICG00000034581	MRPL54	54	64.706	Microcebus_murinus
ENSLOCG00000003860	mrpl54	99	55.556	ENSMOCG00000017895	Mrpl54	64	67.045	Microtus_ochrogaster
ENSLOCG00000003860	mrpl54	99	60.145	ENSMMOG00000020370	mrpl54	80	68.468	Mola_mola
ENSLOCG00000003860	mrpl54	74	67.961	ENSMODG00000000602	MRPL54	63	69.412	Monodelphis_domestica
ENSLOCG00000003860	mrpl54	80	63.964	ENSMALG00000020280	mrpl54	88	59.836	Monopterus_albus
ENSLOCG00000003860	mrpl54	73	66.337	MGP_CAROLIEiJ_G0015629	Mrpl54	65	67.045	Mus_caroli
ENSLOCG00000003860	mrpl54	62	68.235	ENSMUSG00000034932	Mrpl54	65	65.909	Mus_musculus
ENSLOCG00000003860	mrpl54	78	63.889	MGP_PahariEiJ_G0031042	Mrpl54	65	67.045	Mus_pahari
ENSLOCG00000003860	mrpl54	73	66.337	MGP_SPRETEiJ_G0016447	Mrpl54	65	67.045	Mus_spretus
ENSLOCG00000003860	mrpl54	62	67.059	ENSMLUG00000010801	MRPL54	83	65.909	Myotis_lucifugus
ENSLOCG00000003860	mrpl54	99	53.793	ENSNGAG00000021044	Mrpl54	63	67.045	Nannospalax_galili
ENSLOCG00000003860	mrpl54	80	69.369	ENSNBRG00000000568	mrpl54	80	69.369	Neolamprologus_brichardi
ENSLOCG00000003860	mrpl54	73	67.647	ENSMEUG00000013033	MRPL54	64	69.048	Notamacropus_eugenii
ENSLOCG00000003860	mrpl54	99	54.015	ENSOPRG00000010035	-	65	65.517	Ochotona_princeps
ENSLOCG00000003860	mrpl54	78	60.000	ENSODEG00000013969	MRPL54	64	62.500	Octodon_degus
ENSLOCG00000003860	mrpl54	80	70.270	ENSONIG00000002312	mrpl54	72	70.270	Oreochromis_niloticus
ENSLOCG00000003860	mrpl54	70	61.856	ENSORLG00000016960	mrpl54	71	57.955	Oryzias_latipes
ENSLOCG00000003860	mrpl54	72	60.000	ENSORLG00020014934	mrpl54	85	59.091	Oryzias_latipes_hni
ENSLOCG00000003860	mrpl54	70	62.887	ENSORLG00015010788	mrpl54	69	59.091	Oryzias_latipes_hsok
ENSLOCG00000003860	mrpl54	88	59.016	ENSOMEG00000009005	mrpl54	86	59.016	Oryzias_melastigma
ENSLOCG00000003860	mrpl54	91	53.731	ENSOGAG00000033519	-	64	64.773	Otolemur_garnettii
ENSLOCG00000003860	mrpl54	90	54.887	ENSOGAG00000026254	-	64	65.517	Otolemur_garnettii
ENSLOCG00000003860	mrpl54	91	58.209	ENSPPAG00000042418	MRPL54	64	64.773	Pan_paniscus
ENSLOCG00000003860	mrpl54	99	52.899	ENSPPRG00000012325	MRPL54	66	65.909	Panthera_pardus
ENSLOCG00000003860	mrpl54	99	52.448	ENSPTIG00000017727	MRPL54	62	65.909	Panthera_tigris_altaica
ENSLOCG00000003860	mrpl54	91	58.209	ENSPTRG00000010276	MRPL54	64	64.773	Pan_troglodytes
ENSLOCG00000003860	mrpl54	78	62.727	ENSPANG00000033944	MRPL54	62	67.059	Papio_anubis
ENSLOCG00000003860	mrpl54	78	69.444	ENSPKIG00000009984	mrpl54	63	64.815	Paramormyrops_kingsleyae
ENSLOCG00000003860	mrpl54	69	63.158	ENSPSIG00000013587	MRPL54	93	62.500	Pelodiscus_sinensis
ENSLOCG00000003860	mrpl54	80	66.667	ENSPMGG00000015972	mrpl54	73	66.667	Periophthalmus_magnuspinnatus
ENSLOCG00000003860	mrpl54	99	56.429	ENSPEMG00000022929	Mrpl54	62	69.412	Peromyscus_maniculatus_bairdii
ENSLOCG00000003860	mrpl54	73	62.745	ENSPCIG00000025383	MRPL54	63	64.706	Phascolarctos_cinereus
ENSLOCG00000003860	mrpl54	80	63.964	ENSPFOG00000007409	mrpl54	80	63.964	Poecilia_formosa
ENSLOCG00000003860	mrpl54	80	63.964	ENSPLAG00000001633	mrpl54	80	63.964	Poecilia_latipinna
ENSLOCG00000003860	mrpl54	80	63.964	ENSPLAG00000001640	mrpl54	80	63.964	Poecilia_latipinna
ENSLOCG00000003860	mrpl54	80	63.964	ENSPMEG00000021068	mrpl54	80	63.964	Poecilia_mexicana
ENSLOCG00000003860	mrpl54	80	63.964	ENSPMEG00000021078	mrpl54	80	63.964	Poecilia_mexicana
ENSLOCG00000003860	mrpl54	80	64.865	ENSPREG00000012425	mrpl54	80	64.865	Poecilia_reticulata
ENSLOCG00000003860	mrpl54	91	58.209	ENSPPYG00000009386	MRPL54	64	65.909	Pongo_abelii
ENSLOCG00000003860	mrpl54	78	61.261	ENSPCAG00000000690	MRPL54	62	64.706	Procavia_capensis
ENSLOCG00000003860	mrpl54	91	52.985	ENSPCOG00000027550	MRPL54	64	61.364	Propithecus_coquereli
ENSLOCG00000003860	mrpl54	80	69.369	ENSPNYG00000022006	mrpl54	66	69.369	Pundamilia_nyererei
ENSLOCG00000003860	mrpl54	97	63.704	ENSPNAG00000000077	mrpl54	76	74.528	Pygocentrus_nattereri
ENSLOCG00000003860	mrpl54	99	56.028	ENSRNOG00000020464	Mrpl54	65	68.182	Rattus_norvegicus
ENSLOCG00000003860	mrpl54	93	58.647	ENSRBIG00000027038	MRPL54	65	65.909	Rhinopithecus_bieti
ENSLOCG00000003860	mrpl54	93	58.647	ENSRROG00000018776	MRPL54	65	65.909	Rhinopithecus_roxellana
ENSLOCG00000003860	mrpl54	88	59.231	ENSSBOG00000028081	MRPL54	64	65.909	Saimiri_boliviensis_boliviensis
ENSLOCG00000003860	mrpl54	62	67.059	ENSSHAG00000002557	MRPL54	63	67.059	Sarcophilus_harrisii
ENSLOCG00000003860	mrpl54	99	51.079	ENSSFOG00015008073	mrpl54	78	60.185	Scleropages_formosus
ENSLOCG00000003860	mrpl54	99	57.246	ENSSMAG00000009226	mrpl54	86	62.810	Scophthalmus_maximus
ENSLOCG00000003860	mrpl54	80	70.270	ENSSDUG00000009545	mrpl54	80	68.468	Seriola_dumerili
ENSLOCG00000003860	mrpl54	80	70.270	ENSSLDG00000001781	mrpl54	80	68.468	Seriola_lalandi_dorsalis
ENSLOCG00000003860	mrpl54	70	63.542	ENSSPUG00000015361	MRPL54	67	63.636	Sphenodon_punctatus
ENSLOCG00000003860	mrpl54	80	56.757	ENSSPAG00000015601	mrpl54	80	56.757	Stegastes_partitus
ENSLOCG00000003860	mrpl54	80	56.757	ENSSPAG00000003775	-	80	56.757	Stegastes_partitus
ENSLOCG00000003860	mrpl54	80	57.522	ENSSSCG00000024242	MRPL54	64	63.636	Sus_scrofa
ENSLOCG00000003860	mrpl54	99	60.870	ENSTRUG00000004609	mrpl54	80	70.000	Takifugu_rubripes
ENSLOCG00000003860	mrpl54	98	54.815	ENSTNIG00000015468	mrpl54	80	62.727	Tetraodon_nigroviridis
ENSLOCG00000003860	mrpl54	78	58.879	ENSTTRG00000004410	MRPL54	65	63.636	Tursiops_truncatus
ENSLOCG00000003860	mrpl54	91	54.815	ENSUAMG00000021572	MRPL54	64	64.773	Ursus_americanus
ENSLOCG00000003860	mrpl54	91	55.556	ENSUMAG00000007416	MRPL54	64	64.773	Ursus_maritimus
ENSLOCG00000003860	mrpl54	78	57.658	ENSVVUG00000004420	MRPL54	64	62.500	Vulpes_vulpes
ENSLOCG00000003860	mrpl54	73	60.396	ENSXETG00000033250	MRPL54	65	58.621	Xenopus_tropicalis
ENSLOCG00000003860	mrpl54	78	66.667	ENSXMAG00000003500	mrpl54	78	67.290	Xiphophorus_maculatus