EuRBPDB

Description

RBDs

Transcripts

Gene Model

Orthologs

Description

Ensembl ID: ENSLOCG00000003974 (Gene tree)
Gene ID: 102693441
Gene Symbol: ZNF516
Alias: HsT287|KIAA0222
Full Name: zinc finger protein 516
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 64690 bases
Position: chrLG11:9602575-9667264
Accession: 102693441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004743	zf-C2H2	PF00096.26	3.7e-35	1	4
ENSLOCP00000004743	zf-C2H2	PF00096.26	3.7e-35	2	4
ENSLOCP00000004743	zf-C2H2	PF00096.26	3.7e-35	3	4
ENSLOCP00000004743	zf-C2H2	PF00096.26	3.7e-35	4	4
ENSLOCP00000004763	zf-C2H2	PF00096.26	1e-33	1	4
ENSLOCP00000004763	zf-C2H2	PF00096.26	1e-33	2	4
ENSLOCP00000004763	zf-C2H2	PF00096.26	1e-33	3	4
ENSLOCP00000004763	zf-C2H2	PF00096.26	1e-33	4	4
ENSLOCP00000004763	zf-met	PF12874.7	0.00017	1	2
ENSLOCP00000004763	zf-met	PF12874.7	0.00017	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004771	ZNF516-202	3476	-	ENSLOCP00000004763	1121 (aa)	-	W5M8Q5
ENSLOCT00000004751	ZNF516-201	4371	XM_006635668	ENSLOCP00000004743	1192 (aa)	XP_006635731	W5M8N5

Gene Model

Click here to download ENSLOCG00000003974's gene model file

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000003974	ZNF516	52	48.742	ENSPKIG00000013529	-	99	50.579	Paramormyrops_kingsleyae
ENSLOCG00000003974	ZNF516	96	50.000	ENSSFOG00015008969	ZNF516	97	50.000	Scleropages_formosus