EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004002 (Gene tree)
Gene ID: 102697072
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 11951 bases
Position: chrLG23:7046931-7058881
Accession: 102697072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004795	tRNA_anti-codon	PF01336.25	1.2e-12	1	1
ENSLOCP00000004795	tRNA-synt_2	PF00152.20	6.4e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004803	-	4724	XM_006641200	ENSLOCP00000004795	581 (aa)	XP_006641263	W5M8T6

Gene Model

Click here to download ENSLOCG00000004002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004002	kars	90	71.940	ENSLOCG00000013608	-	96	71.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004002	kars	98	81.217	ENSG00000065427	KARS	100	92.157	Homo_sapiens
ENSLOCG00000004002	kars	99	86.010	ENSAPOG00000010997	kars	100	86.010	Acanthochromis_polyacanthus
ENSLOCG00000004002	kars	97	80.986	ENSAMEG00000005347	KARS	91	80.986	Ailuropoda_melanoleuca
ENSLOCG00000004002	kars	99	83.420	ENSACIG00000000304	kars	100	83.420	Amphilophus_citrinellus
ENSLOCG00000004002	kars	98	87.873	ENSAOCG00000012971	kars	97	87.657	Amphiprion_ocellaris
ENSLOCG00000004002	kars	99	87.910	ENSAPEG00000011144	kars	100	87.910	Amphiprion_percula
ENSLOCG00000004002	kars	99	87.219	ENSATEG00000004954	kars	100	87.219	Anabas_testudineus
ENSLOCG00000004002	kars	92	82.430	ENSAPLG00000012705	KARS	97	82.430	Anas_platyrhynchos
ENSLOCG00000004002	kars	97	79.549	ENSACAG00000007577	KARS	90	80.139	Anolis_carolinensis
ENSLOCG00000004002	kars	98	67.010	ENSANAG00000031739	-	93	67.972	Aotus_nancymaae
ENSLOCG00000004002	kars	98	81.850	ENSANAG00000030403	-	96	81.850	Aotus_nancymaae
ENSLOCG00000004002	kars	100	88.985	ENSACLG00000001613	kars	98	88.985	Astatotilapia_calliptera
ENSLOCG00000004002	kars	100	89.673	ENSAMXG00000030719	kars	100	89.637	Astyanax_mexicanus
ENSLOCG00000004002	kars	99	80.034	ENSBTAG00000015677	KARS	77	80.034	Bos_taurus
ENSLOCG00000004002	kars	97	59.325	WBGene00002238	kars-1	97	63.000	Caenorhabditis_elegans
ENSLOCG00000004002	kars	99	80.711	ENSCJAG00000014213	KARS	98	81.739	Callithrix_jacchus
ENSLOCG00000004002	kars	96	82.679	ENSCAFG00000020069	KARS	90	82.679	Canis_familiaris
ENSLOCG00000004002	kars	98	81.850	ENSCAFG00020001721	KARS	96	81.850	Canis_lupus_dingo
ENSLOCG00000004002	kars	97	79.930	ENSCHIG00000016073	-	95	79.930	Capra_hircus
ENSLOCG00000004002	kars	99	80.306	ENSCHIG00000014108	-	99	80.306	Capra_hircus
ENSLOCG00000004002	kars	97	83.216	ENSTSYG00000001643	KARS	96	83.513	Carlito_syrichta
ENSLOCG00000004002	kars	97	75.131	ENSCAPG00000016234	KARS	96	75.131	Cavia_aperea
ENSLOCG00000004002	kars	99	81.058	ENSCPOG00000012036	KARS	98	81.058	Cavia_porcellus
ENSLOCG00000004002	kars	98	81.850	ENSCCAG00000034307	-	96	81.850	Cebus_capucinus
ENSLOCG00000004002	kars	93	66.058	ENSCCAG00000030337	-	100	66.058	Cebus_capucinus
ENSLOCG00000004002	kars	98	80.522	ENSCATG00000038129	KARS	95	81.640	Cercocebus_atys
ENSLOCG00000004002	kars	97	81.754	ENSCLAG00000007905	KARS	96	81.754	Chinchilla_lanigera
ENSLOCG00000004002	kars	96	81.607	ENSCSAG00000003664	KARS	90	81.607	Chlorocebus_sabaeus
ENSLOCG00000004002	kars	77	87.305	ENSCHOG00000013447	KARS	72	87.305	Choloepus_hoffmanni
ENSLOCG00000004002	kars	99	81.034	ENSCPBG00000026969	KARS	98	81.034	Chrysemys_picta_bellii
ENSLOCG00000004002	kars	90	74.472	ENSCPBG00000002553	-	94	74.472	Chrysemys_picta_bellii
ENSLOCG00000004002	kars	97	69.519	ENSCING00000009513	-	97	69.519	Ciona_intestinalis
ENSLOCG00000004002	kars	55	72.013	ENSCSAVG00000001136	-	96	75.600	Ciona_savignyi
ENSLOCG00000004002	kars	98	69.686	ENSCSAVG00000007684	-	99	69.686	Ciona_savignyi
ENSLOCG00000004002	kars	98	76.829	ENSCANG00000032813	KARS	96	76.829	Colobus_angolensis_palliatus
ENSLOCG00000004002	kars	99	81.520	ENSCGRG00001004055	KARS	97	81.520	Cricetulus_griseus_chok1gshd
ENSLOCG00000004002	kars	99	81.520	ENSCGRG00000014242	KARS	97	81.520	Cricetulus_griseus_crigri
ENSLOCG00000004002	kars	99	87.522	ENSCSEG00000008324	kars	99	87.522	Cynoglossus_semilaevis
ENSLOCG00000004002	kars	98	87.873	ENSCVAG00000019686	kars	98	87.873	Cyprinodon_variegatus
ENSLOCG00000004002	kars	99	89.292	ENSDARG00000103799	kars	99	92.233	Danio_rerio
ENSLOCG00000004002	kars	96	82.679	ENSDNOG00000002241	KARS	90	82.679	Dasypus_novemcinctus
ENSLOCG00000004002	kars	99	80.623	ENSDORG00000004780	-	97	80.623	Dipodomys_ordii
ENSLOCG00000004002	kars	96	62.950	ENSDORG00000024214	-	94	63.206	Dipodomys_ordii
ENSLOCG00000004002	kars	97	71.631	FBgn0027084	LysRS	98	71.631	Drosophila_melanogaster
ENSLOCG00000004002	kars	95	83.005	ENSETEG00000008353	KARS	89	83.005	Echinops_telfairi
ENSLOCG00000004002	kars	96	73.874	ENSEBUG00000001284	-	96	73.750	Eptatretus_burgeri
ENSLOCG00000004002	kars	98	81.675	ENSEASG00005013497	KARS	96	81.675	Equus_asinus_asinus
ENSLOCG00000004002	kars	98	81.675	ENSECAG00000013424	KARS	96	81.675	Equus_caballus
ENSLOCG00000004002	kars	97	74.301	ENSEEUG00000007042	KARS	93	73.368	Erinaceus_europaeus
ENSLOCG00000004002	kars	97	81.560	ENSELUG00000014575	kars	97	81.560	Esox_lucius
ENSLOCG00000004002	kars	98	81.326	ENSFCAG00000008573	KARS	97	80.412	Felis_catus
ENSLOCG00000004002	kars	100	79.829	ENSFALG00000002543	KARS	99	79.829	Ficedula_albicollis
ENSLOCG00000004002	kars	97	81.930	ENSFDAG00000007155	KARS	96	81.930	Fukomys_damarensis
ENSLOCG00000004002	kars	99	85.492	ENSFHEG00000006172	kars	100	85.492	Fundulus_heteroclitus
ENSLOCG00000004002	kars	97	87.324	ENSGMOG00000002633	kars	93	87.324	Gadus_morhua
ENSLOCG00000004002	kars	99	80.690	ENSGALG00000000907	KARS	99	81.228	Gallus_gallus
ENSLOCG00000004002	kars	99	87.197	ENSGAFG00000017252	kars	99	87.197	Gambusia_affinis
ENSLOCG00000004002	kars	99	86.426	ENSGACG00000015749	kars	97	86.426	Gasterosteus_aculeatus
ENSLOCG00000004002	kars	88	74.269	ENSGAGG00000011960	-	95	74.704	Gopherus_agassizii
ENSLOCG00000004002	kars	99	81.304	ENSGAGG00000023836	KARS	98	81.304	Gopherus_agassizii
ENSLOCG00000004002	kars	98	81.043	ENSGGOG00000005515	KARS	96	81.043	Gorilla_gorilla
ENSLOCG00000004002	kars	100	88.985	ENSHBUG00000013619	kars	98	88.985	Haplochromis_burtoni
ENSLOCG00000004002	kars	97	81.754	ENSHGLG00000011898	KARS	97	82.290	Heterocephalus_glaber_female
ENSLOCG00000004002	kars	97	66.259	ENSHGLG00000001298	-	95	66.259	Heterocephalus_glaber_female
ENSLOCG00000004002	kars	97	72.982	ENSHGLG00000015235	-	96	73.158	Heterocephalus_glaber_female
ENSLOCG00000004002	kars	97	81.754	ENSHGLG00100012264	KARS	96	81.754	Heterocephalus_glaber_male
ENSLOCG00000004002	kars	97	72.807	ENSHGLG00100012523	-	96	72.982	Heterocephalus_glaber_male
ENSLOCG00000004002	kars	97	66.084	ENSHGLG00100006466	-	95	66.084	Heterocephalus_glaber_male
ENSLOCG00000004002	kars	99	87.565	ENSHCOG00000002900	kars	97	87.565	Hippocampus_comes
ENSLOCG00000004002	kars	99	89.465	ENSIPUG00000009862	kars	100	89.465	Ictalurus_punctatus
ENSLOCG00000004002	kars	99	80.822	ENSSTOG00000004205	KARS	98	80.822	Ictidomys_tridecemlineatus
ENSLOCG00000004002	kars	99	81.207	ENSJJAG00000020406	Kars	98	81.207	Jaculus_jaculus
ENSLOCG00000004002	kars	99	88.083	ENSKMAG00000006434	kars	100	88.083	Kryptolebias_marmoratus
ENSLOCG00000004002	kars	100	87.780	ENSLBEG00000026537	kars	96	87.780	Labrus_bergylta
ENSLOCG00000004002	kars	87	76.331	ENSLACG00000016399	-	99	76.331	Latimeria_chalumnae
ENSLOCG00000004002	kars	97	83.538	ENSLACG00000006667	KARS	92	83.538	Latimeria_chalumnae
ENSLOCG00000004002	kars	96	81.607	ENSLAFG00000015340	KARS	90	81.607	Loxodonta_africana
ENSLOCG00000004002	kars	98	80.348	ENSMFAG00000040024	KARS	96	80.348	Macaca_fascicularis
ENSLOCG00000004002	kars	87	77.691	ENSMNEG00000035832	-	98	77.691	Macaca_nemestrina
ENSLOCG00000004002	kars	98	80.348	ENSMNEG00000042879	-	96	80.348	Macaca_nemestrina
ENSLOCG00000004002	kars	98	80.348	ENSMLEG00000034947	KARS	96	80.348	Mandrillus_leucophaeus
ENSLOCG00000004002	kars	97	89.912	ENSMAMG00000021559	kars	93	89.912	Mastacembelus_armatus
ENSLOCG00000004002	kars	100	88.985	ENSMZEG00005014382	kars	98	88.985	Maylandia_zebra
ENSLOCG00000004002	kars	96	80.107	ENSMGAG00000009000	KARS	98	81.670	Meleagris_gallopavo
ENSLOCG00000004002	kars	99	81.633	ENSMICG00000011997	KARS	99	81.633	Microcebus_murinus
ENSLOCG00000004002	kars	99	81.976	ENSMOCG00000011829	Kars	97	81.976	Microtus_ochrogaster
ENSLOCG00000004002	kars	97	80.141	ENSMOCG00000019029	-	96	80.141	Microtus_ochrogaster
ENSLOCG00000004002	kars	97	89.520	ENSMMOG00000016934	kars	100	89.520	Mola_mola
ENSLOCG00000004002	kars	97	78.975	ENSMODG00000002215	-	98	78.975	Monodelphis_domestica
ENSLOCG00000004002	kars	98	77.193	ENSMODG00000002238	-	91	77.193	Monodelphis_domestica
ENSLOCG00000004002	kars	99	87.737	ENSMALG00000020858	kars	100	87.737	Monopterus_albus
ENSLOCG00000004002	kars	82	81.622	MGP_CAROLIEiJ_G0031588	Kars	95	81.622	Mus_caroli
ENSLOCG00000004002	kars	97	83.304	ENSMUSG00000031948	Kars	96	83.304	Mus_musculus
ENSLOCG00000004002	kars	97	82.601	MGP_PahariEiJ_G0023186	Kars	96	82.601	Mus_pahari
ENSLOCG00000004002	kars	97	83.304	MGP_SPRETEiJ_G0032706	Kars	96	83.304	Mus_spretus
ENSLOCG00000004002	kars	97	81.371	ENSMPUG00000009871	KARS	91	81.371	Mustela_putorius_furo
ENSLOCG00000004002	kars	80	53.867	ENSMLUG00000026871	-	93	53.867	Myotis_lucifugus
ENSLOCG00000004002	kars	99	80.412	ENSMLUG00000015119	-	98	80.412	Myotis_lucifugus
ENSLOCG00000004002	kars	99	81.109	ENSNGAG00000018820	-	97	81.109	Nannospalax_galili
ENSLOCG00000004002	kars	95	80.541	ENSNGAG00000022944	-	95	80.541	Nannospalax_galili
ENSLOCG00000004002	kars	100	88.812	ENSNBRG00000011098	kars	98	88.812	Neolamprologus_brichardi
ENSLOCG00000004002	kars	98	81.217	ENSNLEG00000013072	KARS	96	81.217	Nomascus_leucogenys
ENSLOCG00000004002	kars	98	77.680	ENSMEUG00000008684	KARS	92	77.680	Notamacropus_eugenii
ENSLOCG00000004002	kars	97	81.658	ENSOPRG00000012544	KARS	93	81.658	Ochotona_princeps
ENSLOCG00000004002	kars	97	82.456	ENSODEG00000013099	-	97	82.796	Octodon_degus
ENSLOCG00000004002	kars	96	58.318	ENSODEG00000009464	-	97	58.318	Octodon_degus
ENSLOCG00000004002	kars	100	89.157	ENSONIG00000005937	kars	99	89.157	Oreochromis_niloticus
ENSLOCG00000004002	kars	97	81.560	ENSOANG00000008179	KARS	95	81.560	Ornithorhynchus_anatinus
ENSLOCG00000004002	kars	99	74.871	ENSOCUG00000015553	KARS	97	74.871	Oryctolagus_cuniculus
ENSLOCG00000004002	kars	97	88.516	ENSORLG00000007627	kars	94	88.151	Oryzias_latipes
ENSLOCG00000004002	kars	97	88.163	ENSORLG00020010056	kars	94	87.792	Oryzias_latipes_hni
ENSLOCG00000004002	kars	97	88.339	ENSORLG00015008179	kars	94	87.971	Oryzias_latipes_hsok
ENSLOCG00000004002	kars	99	88.042	ENSOMEG00000001710	kars	99	88.042	Oryzias_melastigma
ENSLOCG00000004002	kars	97	75.606	ENSOGAG00000005903	KARS	92	75.606	Otolemur_garnettii
ENSLOCG00000004002	kars	92	80.812	ENSOARG00000006928	KARS	95	80.812	Ovis_aries
ENSLOCG00000004002	kars	98	81.043	ENSPPAG00000036192	KARS	96	81.043	Pan_paniscus
ENSLOCG00000004002	kars	98	81.217	ENSPPRG00000003027	KARS	96	81.217	Panthera_pardus
ENSLOCG00000004002	kars	98	81.043	ENSPTIG00000008011	KARS	96	81.043	Panthera_tigris_altaica
ENSLOCG00000004002	kars	98	81.043	ENSPTRG00000008364	KARS	96	81.043	Pan_troglodytes
ENSLOCG00000004002	kars	98	80.522	ENSPANG00000024106	KARS	90	81.786	Papio_anubis
ENSLOCG00000004002	kars	99	89.119	ENSPKIG00000009896	kars	100	89.119	Paramormyrops_kingsleyae
ENSLOCG00000004002	kars	96	81.607	ENSPSIG00000009294	KARS	96	81.607	Pelodiscus_sinensis
ENSLOCG00000004002	kars	89	75.145	ENSPSIG00000003041	-	95	75.145	Pelodiscus_sinensis
ENSLOCG00000004002	kars	97	89.858	ENSPMGG00000006117	kars	100	89.858	Periophthalmus_magnuspinnatus
ENSLOCG00000004002	kars	99	81.142	ENSPEMG00000012277	Kars	97	81.142	Peromyscus_maniculatus_bairdii
ENSLOCG00000004002	kars	96	76.377	ENSPMAG00000008360	-	91	76.377	Petromyzon_marinus
ENSLOCG00000004002	kars	97	78.723	ENSPCIG00000025469	-	91	78.723	Phascolarctos_cinereus
ENSLOCG00000004002	kars	99	80.311	ENSPCIG00000010761	-	97	80.311	Phascolarctos_cinereus
ENSLOCG00000004002	kars	97	87.766	ENSPFOG00000013253	kars	92	87.766	Poecilia_formosa
ENSLOCG00000004002	kars	99	87.024	ENSPLAG00000004189	kars	99	87.024	Poecilia_latipinna
ENSLOCG00000004002	kars	99	87.197	ENSPMEG00000015698	kars	99	87.197	Poecilia_mexicana
ENSLOCG00000004002	kars	99	86.678	ENSPREG00000023179	kars	99	86.678	Poecilia_reticulata
ENSLOCG00000004002	kars	96	82.143	ENSPPYG00000007567	KARS	90	82.143	Pongo_abelii
ENSLOCG00000004002	kars	87	77.822	ENSPCAG00000010790	KARS	97	77.822	Procavia_capensis
ENSLOCG00000004002	kars	99	74.403	ENSPCOG00000003166	KARS	99	74.403	Propithecus_coquereli
ENSLOCG00000004002	kars	96	82.500	ENSPVAG00000006746	KARS	90	82.500	Pteropus_vampyrus
ENSLOCG00000004002	kars	100	88.985	ENSPNYG00000013095	kars	98	88.985	Pundamilia_nyererei
ENSLOCG00000004002	kars	99	89.465	ENSPNAG00000013828	kars	100	89.465	Pygocentrus_nattereri
ENSLOCG00000004002	kars	97	81.722	ENSRNOG00000019456	Kars	91	81.722	Rattus_norvegicus
ENSLOCG00000004002	kars	98	80.000	ENSRBIG00000030118	KARS	96	80.776	Rhinopithecus_bieti
ENSLOCG00000004002	kars	97	80.776	ENSRROG00000041418	KARS	96	80.776	Rhinopithecus_roxellana
ENSLOCG00000004002	kars	77	34.801	YNL073W	-	82	34.801	Saccharomyces_cerevisiae
ENSLOCG00000004002	kars	96	57.672	YDR037W	KRS1	94	57.848	Saccharomyces_cerevisiae
ENSLOCG00000004002	kars	98	81.850	ENSSBOG00000019255	KARS	97	82.944	Saimiri_boliviensis_boliviensis
ENSLOCG00000004002	kars	94	71.193	ENSSHAG00000009005	-	97	71.193	Sarcophilus_harrisii
ENSLOCG00000004002	kars	97	67.965	ENSSHAG00000002050	-	90	67.965	Sarcophilus_harrisii
ENSLOCG00000004002	kars	97	74.956	ENSSHAG00000001359	-	98	74.956	Sarcophilus_harrisii
ENSLOCG00000004002	kars	96	90.323	ENSSFOG00015014837	kars	100	90.323	Scleropages_formosus
ENSLOCG00000004002	kars	99	88.428	ENSSMAG00000021441	kars	100	88.428	Scophthalmus_maximus
ENSLOCG00000004002	kars	99	89.465	ENSSDUG00000001202	kars	100	89.465	Seriola_dumerili
ENSLOCG00000004002	kars	97	90.071	ENSSLDG00000021220	kars	98	90.071	Seriola_lalandi_dorsalis
ENSLOCG00000004002	kars	74	90.385	ENSSARG00000011493	KARS	76	90.385	Sorex_araneus
ENSLOCG00000004002	kars	98	81.849	ENSSPUG00000004974	KARS	98	81.387	Sphenodon_punctatus
ENSLOCG00000004002	kars	63	68.033	ENSSPUG00000000449	-	85	68.033	Sphenodon_punctatus
ENSLOCG00000004002	kars	97	88.673	ENSSPAG00000020365	kars	97	88.632	Stegastes_partitus
ENSLOCG00000004002	kars	99	80.479	ENSSSCG00000002704	KARS	98	80.479	Sus_scrofa
ENSLOCG00000004002	kars	96	81.607	ENSTGUG00000008400	KARS	100	81.607	Taeniopygia_guttata
ENSLOCG00000004002	kars	97	85.841	ENSTRUG00000017551	kars	93	85.841	Takifugu_rubripes
ENSLOCG00000004002	kars	98	85.714	ENSTNIG00000009351	kars	97	85.714	Tetraodon_nigroviridis
ENSLOCG00000004002	kars	97	62.500	ENSTBEG00000004610	KARS	100	62.500	Tupaia_belangeri
ENSLOCG00000004002	kars	96	81.964	ENSTTRG00000001221	KARS	90	81.964	Tursiops_truncatus
ENSLOCG00000004002	kars	99	80.379	ENSUAMG00000017557	KARS	97	80.379	Ursus_americanus
ENSLOCG00000004002	kars	97	81.162	ENSUMAG00000014559	KARS	91	81.162	Ursus_maritimus
ENSLOCG00000004002	kars	96	80.714	ENSVPAG00000003716	KARS	89	80.714	Vicugna_pacos
ENSLOCG00000004002	kars	98	81.501	ENSVVUG00000024338	KARS	97	82.514	Vulpes_vulpes
ENSLOCG00000004002	kars	99	79.693	ENSXETG00000003569	kars	100	79.693	Xenopus_tropicalis
ENSLOCG00000004002	kars	96	87.835	ENSXCOG00000011313	kars	99	87.835	Xiphophorus_couchianus
ENSLOCG00000004002	kars	99	87.197	ENSXMAG00000003191	kars	99	87.197	Xiphophorus_maculatus