EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLOCG00000004025 (Gene tree)
Gene ID
102693993
Gene Symbol
AFF1
Alias
AF-4|AF4|MLLT2|PBM1
Full Name
AF4/FMR2 family member 1
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Plus strand
Length
38861 bases
Position
chrLG2:10507549-10546409
Accession
102693993
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000004814AF-4PF05110.13011
ENSLOCP00000004834AF-4PF05110.135.7e-30312
ENSLOCP00000004834AF-4PF05110.135.7e-30322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000004822AFF1-2013525-ENSLOCP000000048141150 (aa)-W5M8V5
ENSLOCT00000004842AFF1-2023339XM_006626664ENSLOCP000000048341074 (aa)XP_015218866W5M8X5
Gene Model
Click here to download ENSLOCG00000004025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLOCG00000004025AFF16458.000ENSLOCG00000015403aff26558.278
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000004025AFF16037.500ENSG00000172493AFF19640.309Homo_sapiens
ENSLOCG00000004025AFF15056.391ENSG00000144218AFF39743.077Homo_sapiens
ENSLOCG00000004025AFF19039.130ENSAPOG00000002994-8638.224Acanthochromis_polyacanthus
ENSLOCG00000004025AFF19937.987ENSAMEG00000003337AFF17071.329Ailuropoda_melanoleuca
ENSLOCG00000004025AFF19040.720ENSAOCG00000020283-8639.374Amphiprion_ocellaris
ENSLOCG00000004025AFF19040.720ENSAPEG00000018794-8639.374Amphiprion_percula
ENSLOCG00000004025AFF18235.177ENSATEG00000010963aff47835.924Anabas_testudineus
ENSLOCG00000004025AFF19039.768ENSATEG00000015552-8538.756Anabas_testudineus
ENSLOCG00000004025AFF19943.147ENSAPLG00000004059AFF18344.351Anas_platyrhynchos
ENSLOCG00000004025AFF16752.830ENSACAG00000008164AFF36152.830Anolis_carolinensis
ENSLOCG00000004025AFF16237.348ENSACAG00000012192AFF18340.490Anolis_carolinensis
ENSLOCG00000004025AFF16138.931ENSANAG00000030084AFF35465.909Aotus_nancymaae
ENSLOCG00000004025AFF16037.917ENSANAG00000017095AFF19640.653Aotus_nancymaae
ENSLOCG00000004025AFF17046.861ENSACLG00000002905-8436.719Astatotilapia_calliptera
ENSLOCG00000004025AFF16150.000ENSAMXG00000000387aff27152.459Astyanax_mexicanus
ENSLOCG00000004025AFF15257.252ENSBTAG00000012449AFF35157.252Bos_taurus
ENSLOCG00000004025AFF16337.414ENSBTAG00000018488AFF17740.541Bos_taurus
ENSLOCG00000004025AFF15258.333ENSCJAG00000010071AFF36438.398Callithrix_jacchus
ENSLOCG00000004025AFF16337.569ENSCJAG00000006047AFF18541.575Callithrix_jacchus
ENSLOCG00000004025AFF15259.091ENSCAFG00000023079AFF36250.000Canis_familiaris
ENSLOCG00000004025AFF16336.376ENSCAFG00000009476AFF17741.972Canis_familiaris
ENSLOCG00000004025AFF16335.734ENSCAFG00020008224AFF17640.063Canis_lupus_dingo
ENSLOCG00000004025AFF16336.986ENSCHIG00000008450AFF17072.727Capra_hircus
ENSLOCG00000004025AFF15257.252ENSCHIG00000026653AFF36537.088Capra_hircus
ENSLOCG00000004025AFF16140.541ENSTSYG00000029683AFF36740.672Carlito_syrichta
ENSLOCG00000004025AFF15249.618ENSCAPG00000012999AFF35949.618Cavia_aperea
ENSLOCG00000004025AFF18137.356ENSCAPG00000006540AFF19635.943Cavia_aperea
ENSLOCG00000004025AFF18737.048ENSCPOG00000034568AFF17639.421Cavia_porcellus
ENSLOCG00000004025AFF15256.061ENSCPOG00000006346AFF35756.061Cavia_porcellus
ENSLOCG00000004025AFF16338.227ENSCCAG00000027623AFF19639.344Cebus_capucinus
ENSLOCG00000004025AFF15258.333ENSCATG00000045196AFF36537.741Cercocebus_atys
ENSLOCG00000004025AFF16337.883ENSCATG00000039501AFF19640.523Cercocebus_atys
ENSLOCG00000004025AFF18136.789ENSCLAG00000005537AFF18338.807Chinchilla_lanigera
ENSLOCG00000004025AFF15255.970ENSCLAG00000017100AFF36354.074Chinchilla_lanigera
ENSLOCG00000004025AFF16036.383ENSCSAG00000017193AFF35365.909Chlorocebus_sabaeus
ENSLOCG00000004025AFF16037.883ENSCSAG00000004333AFF19640.523Chlorocebus_sabaeus
ENSLOCG00000004025AFF16480.769ENSCHOG00000000041AFF16254.043Choloepus_hoffmanni
ENSLOCG00000004025AFF15350.362ENSCHOG00000003138AFF46441.176Choloepus_hoffmanni
ENSLOCG00000004025AFF16241.169ENSCPBG00000005382AFF19642.846Chrysemys_picta_bellii
ENSLOCG00000004025AFF17639.506ENSCPBG00000020831AFF26839.678Chrysemys_picta_bellii
ENSLOCG00000004025AFF19235.000ENSCPBG00000007277AFF36252.500Chrysemys_picta_bellii
ENSLOCG00000004025AFF16037.744ENSCANG00000037514AFF19640.478Colobus_angolensis_palliatus
ENSLOCG00000004025AFF15257.576ENSCGRG00001014566Aff36250.000Cricetulus_griseus_chok1gshd
ENSLOCG00000004025AFF16842.857ENSCGRG00000003408Aff36350.000Cricetulus_griseus_crigri
ENSLOCG00000004025AFF15156.452ENSCSEG00000017002aff45056.452Cynoglossus_semilaevis
ENSLOCG00000004025AFF15054.962ENSCVAG00000005218aff45154.962Cyprinodon_variegatus
ENSLOCG00000004025AFF16842.299ENSCVAG00000015626-5844.776Cyprinodon_variegatus
ENSLOCG00000004025AFF16037.397ENSDNOG00000048783-9941.131Dasypus_novemcinctus
ENSLOCG00000004025AFF15646.000ENSDORG00000007294Aff35746.000Dipodomys_ordii
ENSLOCG00000004025AFF19337.360ENSETEG00000014905AFF19634.176Echinops_telfairi
ENSLOCG00000004025AFF16137.143ENSEBUG00000012097aff45540.149Eptatretus_burgeri
ENSLOCG00000004025AFF15259.091ENSEASG00005018275AFF35159.091Equus_asinus_asinus
ENSLOCG00000004025AFF19938.678ENSEASG00005012760AFF17072.727Equus_asinus_asinus
ENSLOCG00000004025AFF15259.091ENSECAG00000006249AFF35159.091Equus_caballus
ENSLOCG00000004025AFF19345.872ENSECAG00000003619AFF19545.872Equus_caballus
ENSLOCG00000004025AFF16846.063ENSELUG00000023871aff48134.949Esox_lucius
ENSLOCG00000004025AFF19949.268ENSELUG00000019953-9548.768Esox_lucius
ENSLOCG00000004025AFF15257.576ENSFCAG00000029975AFF35841.544Felis_catus
ENSLOCG00000004025AFF16037.720ENSFALG00000005554AFF18239.479Ficedula_albicollis
ENSLOCG00000004025AFF16047.368ENSFALG00000012089AFF27536.255Ficedula_albicollis
ENSLOCG00000004025AFF15257.258ENSGMOG00000008803aff45057.258Gadus_morhua
ENSLOCG00000004025AFF17437.577ENSGALG00000009168AFF26437.448Gallus_gallus
ENSLOCG00000004025AFF18752.542ENSGALG00000043935AFF19639.723Gallus_gallus
ENSLOCG00000004025AFF18234.995ENSGAFG00000005288aff47833.266Gambusia_affinis
ENSLOCG00000004025AFF19935.708ENSGACG00000016333-9634.830Gasterosteus_aculeatus
ENSLOCG00000004025AFF18234.979ENSGACG00000020734aff46133.931Gasterosteus_aculeatus
ENSLOCG00000004025AFF15056.391ENSGGOG00000034914AFF36537.845Gorilla_gorilla
ENSLOCG00000004025AFF16338.451ENSGGOG00000008497AFF19641.080Gorilla_gorilla
ENSLOCG00000004025AFF16845.708ENSHBUG00000005828-8537.234Haplochromis_burtoni
ENSLOCG00000004025AFF18138.611ENSHGLG00000001384AFF19637.450Heterocephalus_glaber_female
ENSLOCG00000004025AFF18137.910ENSHGLG00100016607AFF19737.085Heterocephalus_glaber_male
ENSLOCG00000004025AFF19934.366ENSHCOG00000000539-8836.686Hippocampus_comes
ENSLOCG00000004025AFF15440.917ENSIPUG00000015259-9940.917Ictalurus_punctatus
ENSLOCG00000004025AFF16038.866ENSSTOG00000006530AFF19640.179Ictidomys_tridecemlineatus
ENSLOCG00000004025AFF15748.205ENSSTOG00000012140AFF36950.000Ictidomys_tridecemlineatus
ENSLOCG00000004025AFF16838.689ENSJJAG00000013155Aff36352.500Jaculus_jaculus
ENSLOCG00000004025AFF16337.398ENSJJAG00000022877Aff17841.490Jaculus_jaculus
ENSLOCG00000004025AFF18235.090ENSKMAG00000010443aff46032.645Kryptolebias_marmoratus
ENSLOCG00000004025AFF15239.203ENSKMAG00000013113-7837.407Kryptolebias_marmoratus
ENSLOCG00000004025AFF18439.216ENSLBEG00000016928-7938.373Labrus_bergylta
ENSLOCG00000004025AFF18235.084ENSLBEG00000017778aff47935.368Labrus_bergylta
ENSLOCG00000004025AFF19943.325ENSLACG00000007303AFF19644.971Latimeria_chalumnae
ENSLOCG00000004025AFF17041.943ENSLACG00000008849AFF46941.826Latimeria_chalumnae
ENSLOCG00000004025AFF15545.149ENSLAFG00000018691AFF28739.041Loxodonta_africana
ENSLOCG00000004025AFF15057.143ENSMFAG00000031640AFF36538.082Macaca_fascicularis
ENSLOCG00000004025AFF16338.022ENSMFAG00000037700AFF19640.686Macaca_fascicularis
ENSLOCG00000004025AFF16036.383ENSMMUG00000022836-5165.909Macaca_mulatta
ENSLOCG00000004025AFF16337.883ENSMMUG00000014076AFF19640.605Macaca_mulatta
ENSLOCG00000004025AFF16037.744ENSMNEG00000031536AFF19640.523Macaca_nemestrina
ENSLOCG00000004025AFF16338.022ENSMLEG00000039099AFF19640.686Mandrillus_leucophaeus
ENSLOCG00000004025AFF18235.699ENSMAMG00000021453aff47835.318Mastacembelus_armatus
ENSLOCG00000004025AFF19438.278ENSMAMG00000016189-8738.347Mastacembelus_armatus
ENSLOCG00000004025AFF17046.861ENSMZEG00005020442-8437.016Maylandia_zebra
ENSLOCG00000004025AFF16431.924ENSMGAG00000008246-5836.344Meleagris_gallopavo
ENSLOCG00000004025AFF110038.505ENSMGAG00000007646AFF19539.837Meleagris_gallopavo
ENSLOCG00000004025AFF16336.190ENSMAUG00000010241Aff18637.545Mesocricetus_auratus
ENSLOCG00000004025AFF15259.091ENSMICG00000016001AFF36850.000Microcebus_murinus
ENSLOCG00000004025AFF18238.763ENSMOCG00000017389Aff17839.300Microtus_ochrogaster
ENSLOCG00000004025AFF18234.707ENSMMOG00000013763aff47835.390Mola_mola
ENSLOCG00000004025AFF17434.774ENSMMOG00000010019aff25954.198Mola_mola
ENSLOCG00000004025AFF15366.667ENSMODG00000020745AFF17539.625Monodelphis_domestica
ENSLOCG00000004025AFF18236.147ENSMALG00000017690aff47935.874Monopterus_albus
ENSLOCG00000004025AFF19937.826ENSMALG00000002436-8638.100Monopterus_albus
ENSLOCG00000004025AFF15258.333MGP_CAROLIEiJ_G0014063Aff35156.391Mus_caroli
ENSLOCG00000004025AFF16337.297MGP_CAROLIEiJ_G0027469Aff17941.379Mus_caroli
ENSLOCG00000004025AFF15257.576ENSMUSG00000037138Aff36250.000Mus_musculus
ENSLOCG00000004025AFF16437.600ENSMUSG00000029313Aff17940.495Mus_musculus
ENSLOCG00000004025AFF15257.576MGP_PahariEiJ_G0027310Aff36850.000Mus_pahari
ENSLOCG00000004025AFF18240.778MGP_SPRETEiJ_G0028466Aff18253.191Mus_spretus
ENSLOCG00000004025AFF15257.576MGP_SPRETEiJ_G0014867Aff36250.000Mus_spretus
ENSLOCG00000004025AFF16036.906ENSMPUG00000002270AFF17072.727Mustela_putorius_furo
ENSLOCG00000004025AFF15256.818ENSMPUG00000012091AFF36141.053Mustela_putorius_furo
ENSLOCG00000004025AFF18139.877ENSMLUG00000000293AFF19637.224Myotis_lucifugus
ENSLOCG00000004025AFF15256.818ENSNGAG00000002408Aff36950.000Nannospalax_galili
ENSLOCG00000004025AFF16337.187ENSNLEG00000009429AFF19437.414Nomascus_leucogenys
ENSLOCG00000004025AFF16440.257ENSOPRG00000014519AFF47333.260Ochotona_princeps
ENSLOCG00000004025AFF15438.667ENSOPRG00000010133AFF25138.621Ochotona_princeps
ENSLOCG00000004025AFF17145.816ENSONIG00000007636-9634.677Oreochromis_niloticus
ENSLOCG00000004025AFF16038.622ENSOANG00000013624AFF19641.357Ornithorhynchus_anatinus
ENSLOCG00000004025AFF18036.887ENSOCUG00000009532AFF35842.294Oryctolagus_cuniculus
ENSLOCG00000004025AFF16339.045ENSOCUG00000002105AFF17443.133Oryctolagus_cuniculus
ENSLOCG00000004025AFF17131.663ENSORLG00000006428-8142.520Oryzias_latipes
ENSLOCG00000004025AFF18234.728ENSORLG00000001361aff47934.378Oryzias_latipes
ENSLOCG00000004025AFF18234.623ENSORLG00020020601aff47934.277Oryzias_latipes_hni
ENSLOCG00000004025AFF18634.483ENSORLG00020003991-9135.683Oryzias_latipes_hni
ENSLOCG00000004025AFF18234.705ENSORLG00015004684aff47934.171Oryzias_latipes_hsok
ENSLOCG00000004025AFF18634.679ENSORLG00015009287-9135.668Oryzias_latipes_hsok
ENSLOCG00000004025AFF18634.833ENSOMEG00000005799-9235.466Oryzias_melastigma
ENSLOCG00000004025AFF18234.523ENSOMEG00000005078aff47935.000Oryzias_melastigma
ENSLOCG00000004025AFF16947.451ENSOGAG00000013262AFF36850.000Otolemur_garnettii
ENSLOCG00000004025AFF16037.860ENSOARG00000004522AFF17072.727Ovis_aries
ENSLOCG00000004025AFF16338.912ENSPPAG00000029196AFF19640.868Pan_paniscus
ENSLOCG00000004025AFF16035.676ENSPPRG00000023590AFF19639.080Panthera_pardus
ENSLOCG00000004025AFF15257.576ENSPPRG00000014330AFF35941.544Panthera_pardus
ENSLOCG00000004025AFF15338.028ENSPTIG00000018781AFF35853.448Panthera_tigris_altaica
ENSLOCG00000004025AFF16943.750ENSPTIG00000011838AFF19242.795Panthera_tigris_altaica
ENSLOCG00000004025AFF15154.422ENSPTRG00000046486-7839.827Pan_troglodytes
ENSLOCG00000004025AFF15259.091ENSPTRG00000012281AFF36539.344Pan_troglodytes
ENSLOCG00000004025AFF16338.912ENSPTRG00000016255AFF19467.742Pan_troglodytes
ENSLOCG00000004025AFF16037.374ENSPANG00000016722AFF19538.602Papio_anubis
ENSLOCG00000004025AFF15258.333ENSPANG00000018693AFF36537.845Papio_anubis
ENSLOCG00000004025AFF18234.382ENSPKIG00000024325AFF48135.073Paramormyrops_kingsleyae
ENSLOCG00000004025AFF18236.373ENSPKIG00000024249AFF47937.131Paramormyrops_kingsleyae
ENSLOCG00000004025AFF19365.972ENSPKIG00000007777-8664.050Paramormyrops_kingsleyae
ENSLOCG00000004025AFF15255.303ENSPSIG00000006520-5055.303Pelodiscus_sinensis
ENSLOCG00000004025AFF19940.744ENSPSIG00000003759AFF19641.098Pelodiscus_sinensis
ENSLOCG00000004025AFF15153.086ENSPSIG00000010309AFF26736.908Pelodiscus_sinensis
ENSLOCG00000004025AFF16333.960ENSPEMG00000000785Aff15834.875Peromyscus_maniculatus_bairdii
ENSLOCG00000004025AFF15258.333ENSPEMG00000014802Aff35256.391Peromyscus_maniculatus_bairdii
ENSLOCG00000004025AFF15548.171ENSPMAG00000007807aff45149.112Petromyzon_marinus
ENSLOCG00000004025AFF17354.478ENSPCIG00000011395AFF18240.387Phascolarctos_cinereus
ENSLOCG00000004025AFF17750.382ENSPLAG00000005101aff27848.855Poecilia_latipinna
ENSLOCG00000004025AFF19933.305ENSPREG00000003514-6942.355Poecilia_reticulata
ENSLOCG00000004025AFF15456.391ENSPPYG00000012096AFF36337.386Pongo_abelii
ENSLOCG00000004025AFF15258.333ENSPCOG00000016986AFF36850.000Propithecus_coquereli
ENSLOCG00000004025AFF15246.565ENSPVAG00000006595AFF35838.909Pteropus_vampyrus
ENSLOCG00000004025AFF15256.818ENSRNOG00000018830Aff35154.887Rattus_norvegicus
ENSLOCG00000004025AFF15056.391ENSRBIG00000029993AFF36850.000Rhinopithecus_bieti
ENSLOCG00000004025AFF19937.469ENSRBIG00000032242AFF19640.049Rhinopithecus_bieti
ENSLOCG00000004025AFF19937.575ENSRROG00000045716AFF19640.131Rhinopithecus_roxellana
ENSLOCG00000004025AFF15258.333ENSRROG00000033773AFF36537.845Rhinopithecus_roxellana
ENSLOCG00000004025AFF18841.854ENSSBOG00000035401AFF19640.164Saimiri_boliviensis_boliviensis
ENSLOCG00000004025AFF15258.333ENSSBOG00000026667AFF36538.227Saimiri_boliviensis_boliviensis
ENSLOCG00000004025AFF18239.818ENSSHAG00000004203AFF18057.143Sarcophilus_harrisii
ENSLOCG00000004025AFF19946.619ENSSFOG00015021743-9547.112Scleropages_formosus
ENSLOCG00000004025AFF19140.481ENSSMAG00000007062-8538.799Scophthalmus_maximus
ENSLOCG00000004025AFF18235.189ENSSMAG00000004734aff48235.121Scophthalmus_maximus
ENSLOCG00000004025AFF18235.362ENSSDUG00000019498aff47935.270Seriola_dumerili
ENSLOCG00000004025AFF16239.641ENSSDUG00000023775-9638.558Seriola_dumerili
ENSLOCG00000004025AFF18235.922ENSSLDG00000007683aff47836.315Seriola_lalandi_dorsalis
ENSLOCG00000004025AFF19938.846ENSSLDG00000006836-8939.093Seriola_lalandi_dorsalis
ENSLOCG00000004025AFF19941.007ENSSPUG00000001574AFF18442.516Sphenodon_punctatus
ENSLOCG00000004025AFF19737.756ENSSPAG00000003972-8438.522Stegastes_partitus
ENSLOCG00000004025AFF16434.435ENSSPAG00000012370aff49034.203Stegastes_partitus
ENSLOCG00000004025AFF16337.047ENSSSCG00000023593AFF17068.590Sus_scrofa
ENSLOCG00000004025AFF18936.791ENSTRUG00000014005-7738.121Takifugu_rubripes
ENSLOCG00000004025AFF18235.714ENSTRUG00000008087aff47935.081Takifugu_rubripes
ENSLOCG00000004025AFF18234.660ENSTNIG00000018201aff48035.204Tetraodon_nigroviridis
ENSLOCG00000004025AFF19937.613ENSTBEG00000007536AFF19638.072Tupaia_belangeri
ENSLOCG00000004025AFF16037.637ENSTTRG00000005595AFF19639.918Tursiops_truncatus
ENSLOCG00000004025AFF17340.237ENSUMAG00000025433AFF17442.026Ursus_maritimus
ENSLOCG00000004025AFF17667.586ENSVPAG00000004007AFF17072.028Vicugna_pacos
ENSLOCG00000004025AFF16036.515ENSVVUG00000009263AFF17741.015Vulpes_vulpes
ENSLOCG00000004025AFF18840.580ENSXETG00000019955aff17749.561Xenopus_tropicalis
ENSLOCG00000004025AFF17146.468ENSXETG00000019630aff26651.064Xenopus_tropicalis
ENSLOCG00000004025AFF16633.651ENSXCOG00000006385aff49532.819Xiphophorus_couchianus
ENSLOCG00000004025AFF18234.555ENSXMAG00000001642aff47833.639Xiphophorus_maculatus
ENSLOCG00000004025AFF19933.772ENSXMAG00000004657-6940.854Xiphophorus_maculatus

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