EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004056 (Gene tree)
Gene ID: 102693385
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 4275 bases
Position: chrLG20:5676973-5681247
Accession: 102693385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004842	Glu-tRNAGln	PF02686.15	6.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004850	-	558	XM_006640329	ENSLOCP00000004842	185 (aa)	-	W5M8Y3

Gene Model

Click here to download ENSLOCG00000004056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004056	gatc	54	62.000	ENSG00000257218	GATC	100	70.213	Homo_sapiens
ENSLOCG00000004056	gatc	57	60.377	ENSAMEG00000013298	-	78	60.377	Ailuropoda_melanoleuca
ENSLOCG00000004056	gatc	66	64.228	ENSACIG00000016853	gatc	88	64.228	Amphilophus_citrinellus
ENSLOCG00000004056	gatc	67	75.806	ENSAOCG00000014641	gatc	99	75.806	Amphiprion_ocellaris
ENSLOCG00000004056	gatc	70	73.643	ENSAPEG00000023411	gatc	66	73.643	Amphiprion_percula
ENSLOCG00000004056	gatc	52	75.000	ENSATEG00000009237	gatc	79	75.000	Anabas_testudineus
ENSLOCG00000004056	gatc	56	66.990	ENSACAG00000002868	-	76	66.990	Anolis_carolinensis
ENSLOCG00000004056	gatc	54	63.000	ENSANAG00000034389	-	74	63.000	Aotus_nancymaae
ENSLOCG00000004056	gatc	80	66.892	ENSACLG00000026251	gatc	76	66.892	Astatotilapia_calliptera
ENSLOCG00000004056	gatc	91	58.470	ENSAMXG00000004252	gatc	76	60.694	Astyanax_mexicanus
ENSLOCG00000004056	gatc	54	61.000	ENSBTAG00000012791	GATC	74	61.000	Bos_taurus
ENSLOCG00000004056	gatc	63	38.462	WBGene00013433	Y66D12A.7	67	38.462	Caenorhabditis_elegans
ENSLOCG00000004056	gatc	54	63.000	ENSCJAG00000001183	-	55	63.000	Callithrix_jacchus
ENSLOCG00000004056	gatc	57	60.377	ENSCAFG00000010311	-	78	60.377	Canis_familiaris
ENSLOCG00000004056	gatc	57	60.377	ENSCAFG00020020606	-	78	60.377	Canis_lupus_dingo
ENSLOCG00000004056	gatc	54	61.000	ENSCHIG00000019423	-	74	61.000	Capra_hircus
ENSLOCG00000004056	gatc	69	52.756	ENSTSYG00000006845	-	93	52.756	Carlito_syrichta
ENSLOCG00000004056	gatc	54	63.000	ENSCCAG00000022235	-	74	63.000	Cebus_capucinus
ENSLOCG00000004056	gatc	54	62.000	ENSCATG00000038807	GATC	74	62.000	Cercocebus_atys
ENSLOCG00000004056	gatc	52	62.500	ENSCLAG00000011015	-	60	62.500	Chinchilla_lanigera
ENSLOCG00000004056	gatc	54	63.000	ENSCSAG00000002259	GATC	74	63.000	Chlorocebus_sabaeus
ENSLOCG00000004056	gatc	54	64.000	ENSCHOG00000009235	-	74	64.000	Choloepus_hoffmanni
ENSLOCG00000004056	gatc	69	64.844	ENSCPBG00000011342	-	68	64.844	Chrysemys_picta_bellii
ENSLOCG00000004056	gatc	55	61.386	ENSCANG00000031071	GATC	74	61.386	Colobus_angolensis_palliatus
ENSLOCG00000004056	gatc	51	66.316	ENSCGRG00001019220	-	61	66.316	Cricetulus_griseus_chok1gshd
ENSLOCG00000004056	gatc	51	66.316	ENSCGRG00000004184	-	61	66.316	Cricetulus_griseus_crigri
ENSLOCG00000004056	gatc	69	72.441	ENSCSEG00000007798	gatc	64	72.441	Cynoglossus_semilaevis
ENSLOCG00000004056	gatc	85	53.750	ENSCSEG00000016618	-	94	53.750	Cynoglossus_semilaevis
ENSLOCG00000004056	gatc	70	74.419	ENSCVAG00000004364	gatc	68	74.419	Cyprinodon_variegatus
ENSLOCG00000004056	gatc	91	63.372	ENSDARG00000056855	gatc	93	63.372	Danio_rerio
ENSLOCG00000004056	gatc	54	63.636	ENSDNOG00000012593	-	55	64.444	Dasypus_novemcinctus
ENSLOCG00000004056	gatc	56	43.443	FBgn0064115	GatC	82	43.443	Drosophila_melanogaster
ENSLOCG00000004056	gatc	54	52.525	ENSETEG00000002604	-	73	52.525	Echinops_telfairi
ENSLOCG00000004056	gatc	54	47.475	ENSEBUG00000008772	gatc	57	47.000	Eptatretus_burgeri
ENSLOCG00000004056	gatc	57	60.377	ENSECAG00000011118	-	78	60.377	Equus_caballus
ENSLOCG00000004056	gatc	54	60.606	ENSEEUG00000011638	-	73	60.606	Erinaceus_europaeus
ENSLOCG00000004056	gatc	64	69.919	ENSELUG00000012608	gatc	75	75.728	Esox_lucius
ENSLOCG00000004056	gatc	57	60.377	ENSFCAG00000038718	-	78	60.377	Felis_catus
ENSLOCG00000004056	gatc	68	56.349	ENSFALG00000007564	-	78	56.349	Ficedula_albicollis
ENSLOCG00000004056	gatc	57	61.905	ENSFDAG00000018720	-	77	61.905	Fukomys_damarensis
ENSLOCG00000004056	gatc	70	72.093	ENSFHEG00000014992	GATC	69	72.093	Fundulus_heteroclitus
ENSLOCG00000004056	gatc	70	69.767	ENSGMOG00000008742	gatc	79	69.767	Gadus_morhua
ENSLOCG00000004056	gatc	57	62.264	ENSGALG00000007195	-	79	60.360	Gallus_gallus
ENSLOCG00000004056	gatc	59	72.727	ENSGAFG00000012801	gatc	70	72.727	Gambusia_affinis
ENSLOCG00000004056	gatc	80	60.976	ENSGACG00000008973	gatc	85	60.976	Gasterosteus_aculeatus
ENSLOCG00000004056	gatc	69	64.844	ENSGAGG00000016018	-	70	64.844	Gopherus_agassizii
ENSLOCG00000004056	gatc	80	67.568	ENSHBUG00000006827	gatc	76	67.568	Haplochromis_burtoni
ENSLOCG00000004056	gatc	57	60.377	ENSHGLG00000011394	GATC	78	60.377	Heterocephalus_glaber_female
ENSLOCG00000004056	gatc	57	59.434	ENSHGLG00100018850	-	77	59.434	Heterocephalus_glaber_male
ENSLOCG00000004056	gatc	69	71.875	ENSHCOG00000009209	gatc	100	71.875	Hippocampus_comes
ENSLOCG00000004056	gatc	91	63.905	ENSIPUG00000023072	gatc	79	63.905	Ictalurus_punctatus
ENSLOCG00000004056	gatc	58	59.259	ENSSTOG00000025740	-	71	59.259	Ictidomys_tridecemlineatus
ENSLOCG00000004056	gatc	52	65.625	ENSJJAG00000000369	Gatc	61	65.625	Jaculus_jaculus
ENSLOCG00000004056	gatc	70	68.217	ENSKMAG00000016476	gatc	99	68.217	Kryptolebias_marmoratus
ENSLOCG00000004056	gatc	75	67.391	ENSLBEG00000007603	gatc	76	67.391	Labrus_bergylta
ENSLOCG00000004056	gatc	69	61.719	ENSLACG00000018239	-	66	61.719	Latimeria_chalumnae
ENSLOCG00000004056	gatc	54	62.000	ENSMFAG00000034197	GATC	74	62.000	Macaca_fascicularis
ENSLOCG00000004056	gatc	54	62.000	ENSMMUG00000046665	GATC	74	62.000	Macaca_mulatta
ENSLOCG00000004056	gatc	54	62.000	ENSMNEG00000034653	GATC	74	62.000	Macaca_nemestrina
ENSLOCG00000004056	gatc	54	63.000	ENSMLEG00000039862	GATC	74	63.000	Mandrillus_leucophaeus
ENSLOCG00000004056	gatc	70	73.643	ENSMAMG00000015851	gatc	71	73.643	Mastacembelus_armatus
ENSLOCG00000004056	gatc	80	66.892	ENSMZEG00005016072	gatc	76	66.892	Maylandia_zebra
ENSLOCG00000004056	gatc	57	64.151	ENSMGAG00000008733	-	100	64.151	Meleagris_gallopavo
ENSLOCG00000004056	gatc	51	67.368	ENSMAUG00000012756	Gatc	61	67.368	Mesocricetus_auratus
ENSLOCG00000004056	gatc	54	65.000	ENSMICG00000008669	-	74	65.000	Microcebus_murinus
ENSLOCG00000004056	gatc	51	67.368	ENSMOCG00000005051	Gatc	61	67.368	Microtus_ochrogaster
ENSLOCG00000004056	gatc	64	66.667	ENSMMOG00000017695	gatc	95	67.544	Mola_mola
ENSLOCG00000004056	gatc	56	62.136	ENSMODG00000003152	-	78	62.136	Monodelphis_domestica
ENSLOCG00000004056	gatc	51	66.316	MGP_CAROLIEiJ_G0027623	Gatc	61	66.316	Mus_caroli
ENSLOCG00000004056	gatc	51	66.316	ENSMUSG00000029536	Gatc	61	66.316	Mus_musculus
ENSLOCG00000004056	gatc	52	67.708	MGP_PahariEiJ_G0024203	Gatc	62	67.708	Mus_pahari
ENSLOCG00000004056	gatc	51	65.263	MGP_SPRETEiJ_G0028621	Gatc	61	65.263	Mus_spretus
ENSLOCG00000004056	gatc	57	61.321	ENSMPUG00000003183	-	78	61.321	Mustela_putorius_furo
ENSLOCG00000004056	gatc	51	64.211	ENSMLUG00000010341	-	94	64.211	Myotis_lucifugus
ENSLOCG00000004056	gatc	50	65.591	ENSNGAG00000004734	Gatc	61	65.591	Nannospalax_galili
ENSLOCG00000004056	gatc	80	67.568	ENSNBRG00000007810	gatc	76	67.568	Neolamprologus_brichardi
ENSLOCG00000004056	gatc	59	58.182	ENSNLEG00000015651	GATC	81	58.182	Nomascus_leucogenys
ENSLOCG00000004056	gatc	56	62.500	ENSMEUG00000004064	-	84	62.500	Notamacropus_eugenii
ENSLOCG00000004056	gatc	68	55.556	ENSOPRG00000004226	-	93	55.556	Ochotona_princeps
ENSLOCG00000004056	gatc	70	74.809	ENSONIG00000013444	gatc	90	74.809	Oreochromis_niloticus
ENSLOCG00000004056	gatc	72	51.095	ENSOCUG00000009867	-	82	60.714	Oryctolagus_cuniculus
ENSLOCG00000004056	gatc	65	72.727	ENSORLG00000007156	gatc	100	72.727	Oryzias_latipes
ENSLOCG00000004056	gatc	70	71.318	ENSORLG00020014991	gatc	69	71.318	Oryzias_latipes_hni
ENSLOCG00000004056	gatc	70	72.093	ENSORLG00015003450	gatc	69	72.093	Oryzias_latipes_hsok
ENSLOCG00000004056	gatc	85	59.394	ENSOMEG00000002280	gatc	88	59.394	Oryzias_melastigma
ENSLOCG00000004056	gatc	57	59.434	ENSOGAG00000003850	-	97	59.434	Otolemur_garnettii
ENSLOCG00000004056	gatc	61	55.085	ENSOARG00000012338	-	91	55.085	Ovis_aries
ENSLOCG00000004056	gatc	54	61.000	ENSPPAG00000029164	GATC	74	61.000	Pan_paniscus
ENSLOCG00000004056	gatc	57	59.434	ENSPPRG00000000929	-	78	59.434	Panthera_pardus
ENSLOCG00000004056	gatc	57	59.434	ENSPTIG00000009889	-	78	59.434	Panthera_tigris_altaica
ENSLOCG00000004056	gatc	54	61.000	ENSPTRG00000049887	GATC	74	61.000	Pan_troglodytes
ENSLOCG00000004056	gatc	54	61.000	ENSPANG00000033975	GATC	74	61.000	Papio_anubis
ENSLOCG00000004056	gatc	91	58.757	ENSPKIG00000024856	gatc	91	58.757	Paramormyrops_kingsleyae
ENSLOCG00000004056	gatc	64	62.712	ENSPSIG00000011112	-	100	62.712	Pelodiscus_sinensis
ENSLOCG00000004056	gatc	67	75.806	ENSPMGG00000018829	gatc	79	75.806	Periophthalmus_magnuspinnatus
ENSLOCG00000004056	gatc	51	67.021	ENSPEMG00000000665	Gatc	61	67.021	Peromyscus_maniculatus_bairdii
ENSLOCG00000004056	gatc	50	67.742	ENSPCIG00000025999	-	60	67.742	Phascolarctos_cinereus
ENSLOCG00000004056	gatc	70	73.643	ENSPFOG00000011603	gatc	70	73.643	Poecilia_formosa
ENSLOCG00000004056	gatc	70	72.868	ENSPLAG00000002471	gatc	70	72.868	Poecilia_latipinna
ENSLOCG00000004056	gatc	70	72.868	ENSPMEG00000020958	gatc	70	72.868	Poecilia_mexicana
ENSLOCG00000004056	gatc	60	76.577	ENSPREG00000022256	gatc	75	76.577	Poecilia_reticulata
ENSLOCG00000004056	gatc	57	59.434	ENSPPYG00000005030	GATC	78	59.434	Pongo_abelii
ENSLOCG00000004056	gatc	61	57.895	ENSPCAG00000013864	-	84	57.895	Procavia_capensis
ENSLOCG00000004056	gatc	59	54.128	ENSPCOG00000015558	-	84	54.128	Propithecus_coquereli
ENSLOCG00000004056	gatc	52	63.542	ENSPVAG00000002228	-	71	63.542	Pteropus_vampyrus
ENSLOCG00000004056	gatc	80	67.568	ENSPNYG00000016015	gatc	76	67.568	Pundamilia_nyererei
ENSLOCG00000004056	gatc	91	62.209	ENSPNAG00000001239	gatc	77	63.372	Pygocentrus_nattereri
ENSLOCG00000004056	gatc	51	66.316	ENSRNOG00000001161	Gatc	61	66.316	Rattus_norvegicus
ENSLOCG00000004056	gatc	50	63.441	ENSRNOG00000045621	Gatc	61	63.441	Rattus_norvegicus
ENSLOCG00000004056	gatc	54	62.000	ENSRBIG00000033363	GATC	74	62.000	Rhinopithecus_bieti
ENSLOCG00000004056	gatc	54	62.000	ENSRROG00000042802	GATC	74	62.000	Rhinopithecus_roxellana
ENSLOCG00000004056	gatc	59	58.182	ENSSBOG00000033750	-	81	58.182	Saimiri_boliviensis_boliviensis
ENSLOCG00000004056	gatc	57	62.264	ENSSHAG00000005745	-	100	62.264	Sarcophilus_harrisii
ENSLOCG00000004056	gatc	68	71.200	ENSSFOG00015002508	gatc	73	72.414	Scleropages_formosus
ENSLOCG00000004056	gatc	88	61.494	ENSSMAG00000014280	gatc	97	61.494	Scophthalmus_maximus
ENSLOCG00000004056	gatc	79	60.366	ENSSDUG00000012206	gatc	84	60.366	Seriola_dumerili
ENSLOCG00000004056	gatc	79	60.976	ENSSLDG00000025159	gatc	83	60.976	Seriola_lalandi_dorsalis
ENSLOCG00000004056	gatc	79	52.703	ENSSPUG00000015693	-	90	55.645	Sphenodon_punctatus
ENSLOCG00000004056	gatc	70	75.194	ENSSPAG00000011860	gatc	68	75.194	Stegastes_partitus
ENSLOCG00000004056	gatc	53	65.306	ENSSSCG00000032747	-	72	65.306	Sus_scrofa
ENSLOCG00000004056	gatc	58	63.551	ENSTGUG00000009561	-	99	63.551	Taeniopygia_guttata
ENSLOCG00000004056	gatc	70	71.318	ENSTRUG00000021596	gatc	65	71.318	Takifugu_rubripes
ENSLOCG00000004056	gatc	84	65.605	ENSTNIG00000015879	gatc	75	65.605	Tetraodon_nigroviridis
ENSLOCG00000004056	gatc	54	64.000	ENSTTRG00000000144	GATC	74	64.000	Tursiops_truncatus
ENSLOCG00000004056	gatc	57	61.321	ENSUAMG00000015523	-	78	61.321	Ursus_americanus
ENSLOCG00000004056	gatc	57	60.377	ENSVVUG00000021055	-	78	60.377	Vulpes_vulpes
ENSLOCG00000004056	gatc	60	73.874	ENSXCOG00000017087	gatc	81	73.874	Xiphophorus_couchianus
ENSLOCG00000004056	gatc	70	71.318	ENSXMAG00000018267	gatc	70	71.318	Xiphophorus_maculatus