EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004072 (Gene tree)
Gene ID: -
Gene Symbol: surf6
Alias: surf6l|zgc:64008
Full Name: surfeit 6
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3719 bases
Position: chrLG21:8325696-8329414
Accession: 102695815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004876	SURF6	PF04935.12	3.4e-43	1	1
ENSLOCP00000004892	SURF6	PF04935.12	3.4e-43	1	1
ENSLOCP00000004860	SURF6	PF04935.12	3.8e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004901	-	1068	-	ENSLOCP00000004892	356 (aa)	-	W5M933
ENSLOCT00000004868	-	1113	-	ENSLOCP00000004860	371 (aa)	-	W5M901
ENSLOCT00000004884	-	1071	XM_006640676	ENSLOCP00000004876	357 (aa)	-	W5M917

Gene Model

Click here to download ENSLOCG00000004072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004072	surf6	99	44.205	ENSG00000148296	SURF6	99	44.986	Homo_sapiens
ENSLOCG00000004072	surf6	98	57.025	ENSAPOG00000021015	surf6	99	57.103	Acanthochromis_polyacanthus
ENSLOCG00000004072	surf6	99	44.125	ENSAMEG00000011733	SURF6	99	43.979	Ailuropoda_melanoleuca
ENSLOCG00000004072	surf6	98	55.495	ENSAOCG00000015839	surf6	99	56.044	Amphiprion_ocellaris
ENSLOCG00000004072	surf6	98	55.372	ENSAPEG00000022442	surf6	99	55.372	Amphiprion_percula
ENSLOCG00000004072	surf6	98	55.801	ENSATEG00000012640	surf6	99	55.402	Anabas_testudineus
ENSLOCG00000004072	surf6	90	45.152	ENSAPLG00000005069	SURF6	87	47.635	Anas_platyrhynchos
ENSLOCG00000004072	surf6	100	43.316	ENSANAG00000021046	SURF6	100	46.791	Aotus_nancymaae
ENSLOCG00000004072	surf6	98	56.389	ENSACLG00000027819	surf6	99	56.111	Astatotilapia_calliptera
ENSLOCG00000004072	surf6	99	49.869	ENSAMXG00000012546	surf6	99	50.802	Astyanax_mexicanus
ENSLOCG00000004072	surf6	99	45.961	ENSBTAG00000011554	SURF6	100	45.722	Bos_taurus
ENSLOCG00000004072	surf6	100	43.617	ENSCJAG00000017951	SURF6	99	44.628	Callithrix_jacchus
ENSLOCG00000004072	surf6	100	39.410	ENSCAFG00000005159	-	100	38.172	Canis_familiaris
ENSLOCG00000004072	surf6	100	43.817	ENSCAFG00000019758	-	100	42.742	Canis_familiaris
ENSLOCG00000004072	surf6	100	43.817	ENSCAFG00020001156	SURF6	100	42.742	Canis_lupus_dingo
ENSLOCG00000004072	surf6	100	44.892	ENSCHIG00000025220	SURF6	100	45.430	Capra_hircus
ENSLOCG00000004072	surf6	100	44.271	ENSTSYG00000008431	SURF6	100	44.241	Carlito_syrichta
ENSLOCG00000004072	surf6	87	46.474	ENSCAPG00000010696	SURF6	85	49.474	Cavia_aperea
ENSLOCG00000004072	surf6	99	45.753	ENSCPOG00000030454	SURF6	100	46.194	Cavia_porcellus
ENSLOCG00000004072	surf6	99	43.935	ENSCATG00000042004	SURF6	99	45.455	Cercocebus_atys
ENSLOCG00000004072	surf6	99	44.947	ENSCLAG00000004429	SURF6	89	45.550	Chinchilla_lanigera
ENSLOCG00000004072	surf6	99	42.588	ENSCSAG00000018888	-	99	45.430	Chlorocebus_sabaeus
ENSLOCG00000004072	surf6	99	43.045	ENSCSAG00000015203	-	99	45.232	Chlorocebus_sabaeus
ENSLOCG00000004072	surf6	99	50.681	ENSCPBG00000021169	SURF6	99	49.863	Chrysemys_picta_bellii
ENSLOCG00000004072	surf6	100	46.113	ENSCGRG00000017035	Surf6	100	44.000	Cricetulus_griseus_crigri
ENSLOCG00000004072	surf6	98	53.333	ENSCSEG00000015172	surf6	99	54.622	Cynoglossus_semilaevis
ENSLOCG00000004072	surf6	85	55.519	ENSCVAG00000015730	surf6	89	56.187	Cyprinodon_variegatus
ENSLOCG00000004072	surf6	99	53.315	ENSDARG00000035427	surf6	99	52.762	Danio_rerio
ENSLOCG00000004072	surf6	100	43.915	ENSDNOG00000049519	SURF6	96	44.722	Dasypus_novemcinctus
ENSLOCG00000004072	surf6	100	44.892	ENSDORG00000010761	Surf6	100	48.387	Dipodomys_ordii
ENSLOCG00000004072	surf6	82	45.051	ENSETEG00000004239	SURF6	88	46.959	Echinops_telfairi
ENSLOCG00000004072	surf6	100	44.624	ENSEASG00005009885	SURF6	99	46.648	Equus_asinus_asinus
ENSLOCG00000004072	surf6	100	45.238	ENSECAG00000021229	SURF6	100	45.767	Equus_caballus
ENSLOCG00000004072	surf6	72	49.808	ENSEEUG00000011071	-	98	43.878	Erinaceus_europaeus
ENSLOCG00000004072	surf6	100	44.236	ENSFCAG00000040914	SURF6	99	45.730	Felis_catus
ENSLOCG00000004072	surf6	99	47.425	ENSFALG00000001495	SURF6	99	46.341	Ficedula_albicollis
ENSLOCG00000004072	surf6	85	46.906	ENSFDAG00000007052	SURF6	87	47.887	Fukomys_damarensis
ENSLOCG00000004072	surf6	98	53.889	ENSFHEG00000002290	surf6	99	54.085	Fundulus_heteroclitus
ENSLOCG00000004072	surf6	99	44.414	ENSGALG00000038413	SURF6	100	43.684	Gallus_gallus
ENSLOCG00000004072	surf6	98	53.352	ENSGAFG00000013618	surf6	99	53.631	Gambusia_affinis
ENSLOCG00000004072	surf6	99	48.052	ENSGAGG00000010286	SURF6	99	47.757	Gopherus_agassizii
ENSLOCG00000004072	surf6	99	44.205	ENSGGOG00000014426	SURF6	99	45.205	Gorilla_gorilla
ENSLOCG00000004072	surf6	98	56.389	ENSHBUG00000008764	surf6	99	56.111	Haplochromis_burtoni
ENSLOCG00000004072	surf6	100	44.041	ENSHGLG00000013027	SURF6	100	45.812	Heterocephalus_glaber_female
ENSLOCG00000004072	surf6	90	46.273	ENSHGLG00100015654	SURF6	66	51.866	Heterocephalus_glaber_male
ENSLOCG00000004072	surf6	98	48.725	ENSHCOG00000001639	surf6	99	47.875	Hippocampus_comes
ENSLOCG00000004072	surf6	99	54.821	ENSIPUG00000008066	surf6	99	53.315	Ictalurus_punctatus
ENSLOCG00000004072	surf6	100	43.411	ENSSTOG00000020164	SURF6	100	46.032	Ictidomys_tridecemlineatus
ENSLOCG00000004072	surf6	99	45.179	ENSJJAG00000016287	Surf6	100	44.504	Jaculus_jaculus
ENSLOCG00000004072	surf6	99	53.107	ENSKMAG00000009936	surf6	99	53.760	Kryptolebias_marmoratus
ENSLOCG00000004072	surf6	98	53.911	ENSLBEG00000024311	surf6	99	53.911	Labrus_bergylta
ENSLOCG00000004072	surf6	99	55.367	ENSLACG00000013322	SURF6	99	55.307	Latimeria_chalumnae
ENSLOCG00000004072	surf6	99	45.556	ENSLAFG00000026419	SURF6	100	44.681	Loxodonta_africana
ENSLOCG00000004072	surf6	79	47.440	ENSMMUG00000022339	-	83	48.814	Macaca_mulatta
ENSLOCG00000004072	surf6	99	43.324	ENSMNEG00000033787	SURF6	99	46.237	Macaca_nemestrina
ENSLOCG00000004072	surf6	99	44.205	ENSMLEG00000028750	SURF6	99	45.455	Mandrillus_leucophaeus
ENSLOCG00000004072	surf6	98	55.462	ENSMAMG00000018269	surf6	99	55.402	Mastacembelus_armatus
ENSLOCG00000004072	surf6	98	56.389	ENSMZEG00005003188	surf6	99	56.111	Maylandia_zebra
ENSLOCG00000004072	surf6	99	44.687	ENSMGAG00000006371	SURF6	100	43.864	Meleagris_gallopavo
ENSLOCG00000004072	surf6	100	48.128	ENSMAUG00000020676	Surf6	100	46.917	Mesocricetus_auratus
ENSLOCG00000004072	surf6	100	43.651	ENSMICG00000046077	SURF6	99	45.455	Microcebus_murinus
ENSLOCG00000004072	surf6	100	47.721	ENSMOCG00000011956	Surf6	100	46.381	Microtus_ochrogaster
ENSLOCG00000004072	surf6	99	49.057	ENSMODG00000012744	SURF6	99	48.066	Monodelphis_domestica
ENSLOCG00000004072	surf6	98	55.956	ENSMALG00000012310	surf6	99	55.679	Monopterus_albus
ENSLOCG00000004072	surf6	100	45.989	MGP_CAROLIEiJ_G0023325	Surf6	100	45.722	Mus_caroli
ENSLOCG00000004072	surf6	100	46.257	ENSMUSG00000036160	Surf6	100	45.989	Mus_musculus
ENSLOCG00000004072	surf6	100	46.649	MGP_PahariEiJ_G0024782	Surf6	100	46.649	Mus_pahari
ENSLOCG00000004072	surf6	100	45.989	MGP_SPRETEiJ_G0024242	Surf6	100	45.722	Mus_spretus
ENSLOCG00000004072	surf6	99	41.837	ENSMPUG00000012416	SURF6	94	42.597	Mustela_putorius_furo
ENSLOCG00000004072	surf6	99	45.380	ENSNGAG00000015358	Surf6	99	47.283	Nannospalax_galili
ENSLOCG00000004072	surf6	98	56.389	ENSNBRG00000007805	surf6	99	56.389	Neolamprologus_brichardi
ENSLOCG00000004072	surf6	99	41.779	ENSNLEG00000013079	SURF6	99	42.276	Nomascus_leucogenys
ENSLOCG00000004072	surf6	71	52.569	ENSMEUG00000006545	-	69	52.157	Notamacropus_eugenii
ENSLOCG00000004072	surf6	99	45.634	ENSODEG00000015789	SURF6	99	45.915	Octodon_degus
ENSLOCG00000004072	surf6	98	55.801	ENSONIG00000011294	surf6	98	55.801	Oreochromis_niloticus
ENSLOCG00000004072	surf6	99	39.071	ENSOANG00000011709	-	99	39.227	Ornithorhynchus_anatinus
ENSLOCG00000004072	surf6	98	51.111	ENSORLG00000003980	surf6	85	51.253	Oryzias_latipes
ENSLOCG00000004072	surf6	98	51.111	ENSORLG00020009339	surf6	85	51.667	Oryzias_latipes_hni
ENSLOCG00000004072	surf6	98	51.389	ENSORLG00015016272	surf6	85	51.657	Oryzias_latipes_hsok
ENSLOCG00000004072	surf6	98	52.055	ENSOMEG00000011772	surf6	85	52.793	Oryzias_melastigma
ENSLOCG00000004072	surf6	100	43.883	ENSOGAG00000027199	SURF6	100	43.617	Otolemur_garnettii
ENSLOCG00000004072	surf6	70	40.927	ENSOARG00000003711	SURF6	71	47.030	Ovis_aries
ENSLOCG00000004072	surf6	99	42.748	ENSPPAG00000032305	SURF6	99	45.205	Pan_paniscus
ENSLOCG00000004072	surf6	100	46.133	ENSPPRG00000003090	SURF6	100	46.133	Panthera_pardus
ENSLOCG00000004072	surf6	99	42.748	ENSPTRG00000021514	SURF6	99	45.205	Pan_troglodytes
ENSLOCG00000004072	surf6	99	43.935	ENSPANG00000026036	SURF6	99	45.405	Papio_anubis
ENSLOCG00000004072	surf6	99	57.337	ENSPKIG00000025080	surf6	89	57.300	Paramormyrops_kingsleyae
ENSLOCG00000004072	surf6	99	47.945	ENSPSIG00000011771	SURF6	99	48.767	Pelodiscus_sinensis
ENSLOCG00000004072	surf6	71	61.417	ENSPMGG00000004798	surf6	93	57.651	Periophthalmus_magnuspinnatus
ENSLOCG00000004072	surf6	99	47.826	ENSPEMG00000012589	Surf6	100	46.917	Peromyscus_maniculatus_bairdii
ENSLOCG00000004072	surf6	99	48.294	ENSPCIG00000017358	SURF6	99	49.041	Phascolarctos_cinereus
ENSLOCG00000004072	surf6	98	52.368	ENSPLAG00000021874	surf6	99	52.500	Poecilia_latipinna
ENSLOCG00000004072	surf6	98	52.222	ENSPMEG00000009276	surf6	99	52.825	Poecilia_mexicana
ENSLOCG00000004072	surf6	86	54.545	ENSPMEG00000009994	surf6	85	55.743	Poecilia_mexicana
ENSLOCG00000004072	surf6	86	54.194	ENSPREG00000021969	surf6	91	56.849	Poecilia_reticulata
ENSLOCG00000004072	surf6	99	42.748	ENSPPYG00000019728	SURF6	99	44.715	Pongo_abelii
ENSLOCG00000004072	surf6	77	42.446	ENSPCAG00000002906	SURF6	86	42.963	Procavia_capensis
ENSLOCG00000004072	surf6	99	43.251	ENSPCOG00000015707	SURF6	99	43.802	Propithecus_coquereli
ENSLOCG00000004072	surf6	100	41.555	ENSPVAG00000017042	SURF6	100	41.953	Pteropus_vampyrus
ENSLOCG00000004072	surf6	98	56.667	ENSPNYG00000003445	surf6	99	56.389	Pundamilia_nyererei
ENSLOCG00000004072	surf6	99	52.861	ENSPNAG00000006939	surf6	99	52.989	Pygocentrus_nattereri
ENSLOCG00000004072	surf6	100	48.800	ENSRNOG00000005031	Surf6	100	48.533	Rattus_norvegicus
ENSLOCG00000004072	surf6	99	42.636	ENSRBIG00000028268	SURF6	99	45.968	Rhinopithecus_bieti
ENSLOCG00000004072	surf6	99	42.636	ENSRROG00000012667	SURF6	99	45.968	Rhinopithecus_roxellana
ENSLOCG00000004072	surf6	100	42.857	ENSSBOG00000024264	-	100	40.849	Saimiri_boliviensis_boliviensis
ENSLOCG00000004072	surf6	99	48.656	ENSSHAG00000003742	SURF6	99	48.760	Sarcophilus_harrisii
ENSLOCG00000004072	surf6	99	60.705	ENSSFOG00015016640	surf6	96	60.590	Scleropages_formosus
ENSLOCG00000004072	surf6	98	55.769	ENSSMAG00000009846	surf6	98	56.425	Scophthalmus_maximus
ENSLOCG00000004072	surf6	98	56.403	ENSSDUG00000007947	surf6	99	56.284	Seriola_dumerili
ENSLOCG00000004072	surf6	98	55.858	ENSSLDG00000015027	surf6	99	55.738	Seriola_lalandi_dorsalis
ENSLOCG00000004072	surf6	99	46.893	ENSSPUG00000015954	SURF6	99	49.333	Sphenodon_punctatus
ENSLOCG00000004072	surf6	98	54.875	ENSSPAG00000005916	surf6	99	54.596	Stegastes_partitus
ENSLOCG00000004072	surf6	99	44.180	ENSTGUG00000005438	-	100	45.187	Taeniopygia_guttata
ENSLOCG00000004072	surf6	71	52.308	ENSTGUG00000005445	-	99	53.488	Taeniopygia_guttata
ENSLOCG00000004072	surf6	98	49.465	ENSTRUG00000023872	surf6	99	50.552	Takifugu_rubripes
ENSLOCG00000004072	surf6	98	50.954	ENSTNIG00000007503	surf6	99	50.980	Tetraodon_nigroviridis
ENSLOCG00000004072	surf6	99	45.119	ENSUAMG00000014627	SURF6	99	45.576	Ursus_americanus
ENSLOCG00000004072	surf6	100	43.817	ENSVVUG00000027289	SURF6	100	42.742	Vulpes_vulpes
ENSLOCG00000004072	surf6	100	51.404	ENSXETG00000005018	surf6	99	51.499	Xenopus_tropicalis
ENSLOCG00000004072	surf6	98	54.986	ENSXCOG00000001322	surf6	99	54.986	Xiphophorus_couchianus
ENSLOCG00000004072	surf6	98	54.261	ENSXMAG00000024608	surf6	99	54.261	Xiphophorus_maculatus