EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004073 (Gene tree)
Gene ID: 102698109
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3682 bases
Position: chrLG22:5491555-5495236
Accession: 102698109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004865	SBDS	PF01172.18	5.8e-34	1	1
ENSLOCP00000004865	SBDS_C	PF09377.10	1.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004873	-	1479	XM_006640863	ENSLOCP00000004865	250 (aa)	XP_006640926	W5M906

Gene Model

Click here to download ENSLOCG00000004073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004073	sbds	100	87.600	ENSG00000126524	SBDS	100	87.600	Homo_sapiens
ENSLOCG00000004073	sbds	99	90.361	ENSAPOG00000014285	sbds	100	90.361	Acanthochromis_polyacanthus
ENSLOCG00000004073	sbds	100	87.600	ENSAMEG00000018167	SBDS	100	87.600	Ailuropoda_melanoleuca
ENSLOCG00000004073	sbds	99	88.492	ENSACIG00000007308	sbds	100	88.492	Amphilophus_citrinellus
ENSLOCG00000004073	sbds	99	90.763	ENSAOCG00000016770	sbds	100	90.763	Amphiprion_ocellaris
ENSLOCG00000004073	sbds	99	90.763	ENSAPEG00000015897	sbds	100	90.763	Amphiprion_percula
ENSLOCG00000004073	sbds	99	91.566	ENSATEG00000006901	sbds	100	91.566	Anabas_testudineus
ENSLOCG00000004073	sbds	92	81.385	ENSANAG00000024342	-	97	81.385	Aotus_nancymaae
ENSLOCG00000004073	sbds	83	87.440	ENSANAG00000037501	-	100	87.440	Aotus_nancymaae
ENSLOCG00000004073	sbds	99	90.361	ENSACLG00000018750	sbds	100	90.361	Astatotilapia_calliptera
ENSLOCG00000004073	sbds	100	91.600	ENSAMXG00000005361	sbds	100	91.600	Astyanax_mexicanus
ENSLOCG00000004073	sbds	100	87.600	ENSBTAG00000004051	SBDS	100	87.600	Bos_taurus
ENSLOCG00000004073	sbds	98	56.911	WBGene00021063	sbds-1	97	56.911	Caenorhabditis_elegans
ENSLOCG00000004073	sbds	100	87.600	ENSCJAG00000041007	SBDS	100	87.600	Callithrix_jacchus
ENSLOCG00000004073	sbds	100	85.714	ENSCAFG00000010797	SBDS	100	85.714	Canis_familiaris
ENSLOCG00000004073	sbds	100	87.600	ENSCAFG00020005357	SBDS	100	87.600	Canis_lupus_dingo
ENSLOCG00000004073	sbds	100	87.600	ENSCHIG00000026854	SBDS	100	87.600	Capra_hircus
ENSLOCG00000004073	sbds	100	87.600	ENSTSYG00000033822	SBDS	100	87.600	Carlito_syrichta
ENSLOCG00000004073	sbds	66	89.024	ENSCAPG00000006634	SBDS	100	89.024	Cavia_aperea
ENSLOCG00000004073	sbds	100	88.400	ENSCPOG00000036143	SBDS	100	88.400	Cavia_porcellus
ENSLOCG00000004073	sbds	100	87.600	ENSCCAG00000020671	SBDS	100	87.600	Cebus_capucinus
ENSLOCG00000004073	sbds	100	87.600	ENSCATG00000039026	SBDS	100	87.600	Cercocebus_atys
ENSLOCG00000004073	sbds	99	63.306	ENSCLAG00000002113	-	99	63.306	Chinchilla_lanigera
ENSLOCG00000004073	sbds	100	88.800	ENSCLAG00000005721	-	100	88.800	Chinchilla_lanigera
ENSLOCG00000004073	sbds	100	87.600	ENSCSAG00000018275	SBDS	100	87.600	Chlorocebus_sabaeus
ENSLOCG00000004073	sbds	100	82.800	ENSCHOG00000003795	SBDS	100	82.800	Choloepus_hoffmanni
ENSLOCG00000004073	sbds	100	91.600	ENSCPBG00000014893	SBDS	100	91.600	Chrysemys_picta_bellii
ENSLOCG00000004073	sbds	99	66.800	ENSCSAVG00000011811	-	100	66.800	Ciona_savignyi
ENSLOCG00000004073	sbds	100	87.200	ENSCANG00000032368	SBDS	100	87.200	Colobus_angolensis_palliatus
ENSLOCG00000004073	sbds	66	85.976	ENSCGRG00001019886	Sbds	100	85.976	Cricetulus_griseus_chok1gshd
ENSLOCG00000004073	sbds	83	85.990	ENSCGRG00000009211	Sbds	100	85.990	Cricetulus_griseus_crigri
ENSLOCG00000004073	sbds	99	89.960	ENSCSEG00000005798	sbds	100	89.960	Cynoglossus_semilaevis
ENSLOCG00000004073	sbds	99	87.149	ENSCVAG00000001053	sbds	100	87.149	Cyprinodon_variegatus
ENSLOCG00000004073	sbds	100	92.400	ENSDARG00000027803	sbds	100	92.400	Danio_rerio
ENSLOCG00000004073	sbds	100	87.600	ENSDNOG00000041174	SBDS	100	87.600	Dasypus_novemcinctus
ENSLOCG00000004073	sbds	100	86.800	ENSDORG00000026218	Sbds	100	86.800	Dipodomys_ordii
ENSLOCG00000004073	sbds	90	61.842	FBgn0035714	CG8549	99	61.847	Drosophila_melanogaster
ENSLOCG00000004073	sbds	93	57.940	ENSEBUG00000015780	sbds	100	57.940	Eptatretus_burgeri
ENSLOCG00000004073	sbds	100	87.600	ENSEASG00005008821	SBDS	100	87.600	Equus_asinus_asinus
ENSLOCG00000004073	sbds	100	87.600	ENSECAG00000008202	SBDS	100	87.600	Equus_caballus
ENSLOCG00000004073	sbds	83	68.269	ENSEEUG00000004768	SBDS	100	68.269	Erinaceus_europaeus
ENSLOCG00000004073	sbds	100	89.600	ENSELUG00000008382	sbds	100	89.600	Esox_lucius
ENSLOCG00000004073	sbds	100	87.200	ENSFCAG00000022142	SBDS	100	87.200	Felis_catus
ENSLOCG00000004073	sbds	100	90.800	ENSFALG00000013808	SBDS	100	90.800	Ficedula_albicollis
ENSLOCG00000004073	sbds	100	88.400	ENSFDAG00000018947	-	100	88.400	Fukomys_damarensis
ENSLOCG00000004073	sbds	99	84.739	ENSFHEG00000000708	sbds	99	85.425	Fundulus_heteroclitus
ENSLOCG00000004073	sbds	100	88.400	ENSGMOG00000018356	sbds	99	88.400	Gadus_morhua
ENSLOCG00000004073	sbds	100	88.800	ENSGALG00000027989	SBDS	100	88.800	Gallus_gallus
ENSLOCG00000004073	sbds	92	83.913	ENSGAFG00000014204	sbds	100	83.913	Gambusia_affinis
ENSLOCG00000004073	sbds	99	88.755	ENSGACG00000012697	sbds	100	88.755	Gasterosteus_aculeatus
ENSLOCG00000004073	sbds	86	92.991	ENSGAGG00000022402	SBDS	100	92.991	Gopherus_agassizii
ENSLOCG00000004073	sbds	96	69.295	ENSGGOG00000040023	-	92	69.295	Gorilla_gorilla
ENSLOCG00000004073	sbds	99	90.361	ENSHBUG00000002660	sbds	100	90.361	Haplochromis_burtoni
ENSLOCG00000004073	sbds	100	86.800	ENSHGLG00000009671	SBDS	100	86.800	Heterocephalus_glaber_female
ENSLOCG00000004073	sbds	100	86.800	ENSHGLG00100011332	SBDS	100	86.800	Heterocephalus_glaber_male
ENSLOCG00000004073	sbds	99	85.141	ENSHCOG00000018606	sbds	100	85.141	Hippocampus_comes
ENSLOCG00000004073	sbds	100	92.800	ENSIPUG00000006536	sbds	100	92.800	Ictalurus_punctatus
ENSLOCG00000004073	sbds	100	84.400	ENSJJAG00000012033	-	100	84.400	Jaculus_jaculus
ENSLOCG00000004073	sbds	100	62.451	ENSJJAG00000003934	-	100	62.451	Jaculus_jaculus
ENSLOCG00000004073	sbds	99	88.755	ENSKMAG00000018542	sbds	100	88.755	Kryptolebias_marmoratus
ENSLOCG00000004073	sbds	99	87.550	ENSLBEG00000016687	sbds	100	87.550	Labrus_bergylta
ENSLOCG00000004073	sbds	100	75.984	ENSLACG00000018916	SBDS	100	75.984	Latimeria_chalumnae
ENSLOCG00000004073	sbds	100	86.800	ENSLAFG00000008763	SBDS	100	86.800	Loxodonta_africana
ENSLOCG00000004073	sbds	100	87.600	ENSMFAG00000032620	SBDS	100	87.600	Macaca_fascicularis
ENSLOCG00000004073	sbds	100	87.600	ENSMMUG00000045653	SBDS	100	87.600	Macaca_mulatta
ENSLOCG00000004073	sbds	100	87.600	ENSMNEG00000031523	SBDS	100	87.600	Macaca_nemestrina
ENSLOCG00000004073	sbds	100	67.717	ENSMLEG00000036826	SBDS	100	67.717	Mandrillus_leucophaeus
ENSLOCG00000004073	sbds	99	89.558	ENSMAMG00000016062	sbds	100	89.558	Mastacembelus_armatus
ENSLOCG00000004073	sbds	99	90.361	ENSMZEG00005024385	sbds	100	90.361	Maylandia_zebra
ENSLOCG00000004073	sbds	100	88.800	ENSMGAG00000002119	SBDS	100	88.800	Meleagris_gallopavo
ENSLOCG00000004073	sbds	99	69.076	ENSMAUG00000022214	-	100	69.076	Mesocricetus_auratus
ENSLOCG00000004073	sbds	100	87.600	ENSMICG00000014366	SBDS	100	87.600	Microcebus_murinus
ENSLOCG00000004073	sbds	100	86.800	ENSMOCG00000011739	Sbds	100	86.800	Microtus_ochrogaster
ENSLOCG00000004073	sbds	99	80.000	ENSMMOG00000005061	sbds	100	79.600	Mola_mola
ENSLOCG00000004073	sbds	100	89.200	ENSMODG00000006644	SBDS	100	89.200	Monodelphis_domestica
ENSLOCG00000004073	sbds	99	87.550	ENSMALG00000010219	sbds	100	87.550	Monopterus_albus
ENSLOCG00000004073	sbds	100	87.600	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSLOCG00000004073	sbds	100	87.200	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSLOCG00000004073	sbds	100	87.600	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSLOCG00000004073	sbds	100	87.200	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSLOCG00000004073	sbds	67	85.714	ENSMPUG00000016192	SBDS	97	85.714	Mustela_putorius_furo
ENSLOCG00000004073	sbds	73	85.714	ENSMLUG00000013575	SBDS	100	85.714	Myotis_lucifugus
ENSLOCG00000004073	sbds	100	86.800	ENSNGAG00000012093	Sbds	100	86.800	Nannospalax_galili
ENSLOCG00000004073	sbds	99	90.361	ENSNBRG00000017027	sbds	100	90.361	Neolamprologus_brichardi
ENSLOCG00000004073	sbds	100	87.600	ENSNLEG00000013288	SBDS	100	87.600	Nomascus_leucogenys
ENSLOCG00000004073	sbds	100	86.400	ENSOPRG00000008721	SBDS	100	86.400	Ochotona_princeps
ENSLOCG00000004073	sbds	99	69.076	ENSODEG00000001116	-	99	69.076	Octodon_degus
ENSLOCG00000004073	sbds	100	79.200	ENSODEG00000019253	-	84	79.200	Octodon_degus
ENSLOCG00000004073	sbds	99	66.667	ENSODEG00000000137	-	85	69.600	Octodon_degus
ENSLOCG00000004073	sbds	99	90.361	ENSONIG00000005874	sbds	100	90.361	Oreochromis_niloticus
ENSLOCG00000004073	sbds	83	85.507	ENSOANG00000007674	-	100	85.507	Ornithorhynchus_anatinus
ENSLOCG00000004073	sbds	100	87.600	ENSOCUG00000003170	SBDS	100	87.600	Oryctolagus_cuniculus
ENSLOCG00000004073	sbds	99	85.141	ENSORLG00000023489	sbds	100	85.141	Oryzias_latipes
ENSLOCG00000004073	sbds	99	84.739	ENSORLG00020019282	sbds	100	84.739	Oryzias_latipes_hni
ENSLOCG00000004073	sbds	99	84.739	ENSORLG00015008005	sbds	100	84.739	Oryzias_latipes_hsok
ENSLOCG00000004073	sbds	99	85.141	ENSOMEG00000022747	sbds	100	85.141	Oryzias_melastigma
ENSLOCG00000004073	sbds	100	72.800	ENSOGAG00000015036	-	100	72.800	Otolemur_garnettii
ENSLOCG00000004073	sbds	100	88.000	ENSOGAG00000009011	-	100	88.000	Otolemur_garnettii
ENSLOCG00000004073	sbds	100	87.600	ENSOARG00000010609	SBDS	100	87.600	Ovis_aries
ENSLOCG00000004073	sbds	100	86.800	ENSPPAG00000043889	-	100	86.800	Pan_paniscus
ENSLOCG00000004073	sbds	100	87.200	ENSPPRG00000002307	SBDS	100	87.200	Panthera_pardus
ENSLOCG00000004073	sbds	100	87.200	ENSPTIG00000021308	SBDS	100	87.200	Panthera_tigris_altaica
ENSLOCG00000004073	sbds	100	87.600	ENSPTRG00000019254	SBDS	100	87.600	Pan_troglodytes
ENSLOCG00000004073	sbds	87	85.253	ENSPTRG00000048174	-	96	85.253	Pan_troglodytes
ENSLOCG00000004073	sbds	100	74.400	ENSPTRG00000047744	-	100	74.400	Pan_troglodytes
ENSLOCG00000004073	sbds	100	74.400	ENSPTRG00000050835	-	100	74.400	Pan_troglodytes
ENSLOCG00000004073	sbds	100	87.200	ENSPANG00000004078	SBDS	100	87.200	Papio_anubis
ENSLOCG00000004073	sbds	100	94.000	ENSPKIG00000006489	sbds	100	94.000	Paramormyrops_kingsleyae
ENSLOCG00000004073	sbds	83	91.827	ENSPSIG00000014603	SBDS	100	91.827	Pelodiscus_sinensis
ENSLOCG00000004073	sbds	99	89.157	ENSPMGG00000004246	sbds	100	89.157	Periophthalmus_magnuspinnatus
ENSLOCG00000004073	sbds	100	86.800	ENSPEMG00000008728	Sbds	100	86.800	Peromyscus_maniculatus_bairdii
ENSLOCG00000004073	sbds	100	88.400	ENSPCIG00000029718	SBDS	100	88.400	Phascolarctos_cinereus
ENSLOCG00000004073	sbds	99	85.944	ENSPFOG00000015837	sbds	100	85.944	Poecilia_formosa
ENSLOCG00000004073	sbds	99	86.345	ENSPLAG00000003641	sbds	100	86.345	Poecilia_latipinna
ENSLOCG00000004073	sbds	99	85.944	ENSPMEG00000019483	sbds	100	85.944	Poecilia_mexicana
ENSLOCG00000004073	sbds	99	85.944	ENSPREG00000018758	sbds	100	85.944	Poecilia_reticulata
ENSLOCG00000004073	sbds	100	87.600	ENSPPYG00000017513	SBDS	100	87.600	Pongo_abelii
ENSLOCG00000004073	sbds	100	87.200	ENSPCOG00000021098	SBDS	100	87.200	Propithecus_coquereli
ENSLOCG00000004073	sbds	100	87.200	ENSPVAG00000009369	SBDS	100	87.200	Pteropus_vampyrus
ENSLOCG00000004073	sbds	99	89.960	ENSPNYG00000022403	sbds	100	89.960	Pundamilia_nyererei
ENSLOCG00000004073	sbds	100	92.800	ENSPNAG00000001120	sbds	100	92.800	Pygocentrus_nattereri
ENSLOCG00000004073	sbds	100	87.200	ENSRNOG00000000888	Sbds	100	87.200	Rattus_norvegicus
ENSLOCG00000004073	sbds	100	87.600	ENSRBIG00000035557	SBDS	100	87.600	Rhinopithecus_bieti
ENSLOCG00000004073	sbds	100	70.800	ENSRROG00000041986	-	100	68.400	Rhinopithecus_roxellana
ENSLOCG00000004073	sbds	100	87.600	ENSRROG00000040842	-	100	87.600	Rhinopithecus_roxellana
ENSLOCG00000004073	sbds	96	43.902	YLR022C	-	96	42.041	Saccharomyces_cerevisiae
ENSLOCG00000004073	sbds	93	85.776	ENSSBOG00000022460	SBDS	100	85.776	Saimiri_boliviensis_boliviensis
ENSLOCG00000004073	sbds	100	77.600	ENSSHAG00000010263	SBDS	100	77.600	Sarcophilus_harrisii
ENSLOCG00000004073	sbds	100	94.800	ENSSFOG00015001108	sbds	100	94.800	Scleropages_formosus
ENSLOCG00000004073	sbds	99	89.960	ENSSMAG00000020506	sbds	100	89.960	Scophthalmus_maximus
ENSLOCG00000004073	sbds	99	89.558	ENSSDUG00000001528	sbds	100	89.558	Seriola_dumerili
ENSLOCG00000004073	sbds	99	89.157	ENSSLDG00000003659	sbds	100	89.157	Seriola_lalandi_dorsalis
ENSLOCG00000004073	sbds	61	89.542	ENSSARG00000013132	-	100	89.542	Sorex_araneus
ENSLOCG00000004073	sbds	73	88.372	ENSSARG00000001899	-	73	88.372	Sorex_araneus
ENSLOCG00000004073	sbds	100	88.400	ENSSPUG00000002699	SBDS	100	88.400	Sphenodon_punctatus
ENSLOCG00000004073	sbds	99	90.361	ENSSPAG00000016419	sbds	100	83.936	Stegastes_partitus
ENSLOCG00000004073	sbds	100	87.600	ENSSSCG00000007732	SBDS	100	87.600	Sus_scrofa
ENSLOCG00000004073	sbds	66	92.121	ENSTGUG00000003426	SBDS	99	92.121	Taeniopygia_guttata
ENSLOCG00000004073	sbds	99	89.157	ENSTRUG00000021443	sbds	100	89.157	Takifugu_rubripes
ENSLOCG00000004073	sbds	99	88.353	ENSTNIG00000019000	sbds	100	88.353	Tetraodon_nigroviridis
ENSLOCG00000004073	sbds	83	74.038	ENSTBEG00000001178	SBDS	100	74.038	Tupaia_belangeri
ENSLOCG00000004073	sbds	100	68.400	ENSTTRG00000003921	SBDS	100	68.400	Tursiops_truncatus
ENSLOCG00000004073	sbds	100	87.600	ENSUAMG00000001326	SBDS	100	87.600	Ursus_americanus
ENSLOCG00000004073	sbds	100	87.600	ENSUMAG00000015353	SBDS	100	87.600	Ursus_maritimus
ENSLOCG00000004073	sbds	100	87.600	ENSVVUG00000016478	SBDS	100	87.600	Vulpes_vulpes
ENSLOCG00000004073	sbds	100	89.200	ENSXETG00000010093	sbds	100	89.200	Xenopus_tropicalis
ENSLOCG00000004073	sbds	99	77.108	ENSXCOG00000010639	sbds	100	77.108	Xiphophorus_couchianus
ENSLOCG00000004073	sbds	99	86.747	ENSXMAG00000006065	sbds	100	86.747	Xiphophorus_maculatus