EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004160 (Gene tree)
Gene ID: 102684151
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5882 bases
Position: chrLG12:7101149-7107030
Accession: 102684151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000004981	DBR1	PF05011.13	3.7e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000004989	-	2880	XM_006636396	ENSLOCP00000004981	559 (aa)	XP_006636459	W5M9C2

Gene Model

Click here to download ENSLOCG00000004160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004160	dbr1	98	59.091	ENSG00000138231	DBR1	94	80.180	Homo_sapiens
ENSLOCG00000004160	dbr1	100	66.314	ENSAPOG00000004318	dbr1	100	65.194	Acanthochromis_polyacanthus
ENSLOCG00000004160	dbr1	98	58.106	ENSAMEG00000006272	DBR1	78	67.371	Ailuropoda_melanoleuca
ENSLOCG00000004160	dbr1	100	67.376	ENSACIG00000020512	dbr1	100	66.667	Amphilophus_citrinellus
ENSLOCG00000004160	dbr1	100	66.078	ENSAOCG00000008060	dbr1	100	66.608	Amphiprion_ocellaris
ENSLOCG00000004160	dbr1	100	65.785	ENSAPEG00000021944	dbr1	100	65.724	Amphiprion_percula
ENSLOCG00000004160	dbr1	99	68.617	ENSATEG00000019673	dbr1	99	68.206	Anabas_testudineus
ENSLOCG00000004160	dbr1	99	57.726	ENSACAG00000016760	DBR1	100	57.194	Anolis_carolinensis
ENSLOCG00000004160	dbr1	98	59.781	ENSANAG00000028952	DBR1	79	69.231	Aotus_nancymaae
ENSLOCG00000004160	dbr1	100	66.373	ENSACLG00000024027	dbr1	100	66.081	Astatotilapia_calliptera
ENSLOCG00000004160	dbr1	99	68.717	ENSAMXG00000030736	dbr1	99	68.254	Astyanax_mexicanus
ENSLOCG00000004160	dbr1	99	57.424	ENSBTAG00000019949	DBR1	78	66.667	Bos_taurus
ENSLOCG00000004160	dbr1	68	46.582	WBGene00000937	dbr-1	78	46.582	Caenorhabditis_elegans
ENSLOCG00000004160	dbr1	98	59.273	ENSCJAG00000002433	DBR1	99	58.676	Callithrix_jacchus
ENSLOCG00000004160	dbr1	98	57.971	ENSCAFG00000007501	DBR1	78	67.832	Canis_familiaris
ENSLOCG00000004160	dbr1	98	57.971	ENSCAFG00020008060	DBR1	78	67.832	Canis_lupus_dingo
ENSLOCG00000004160	dbr1	99	57.603	ENSCHIG00000026937	DBR1	78	66.667	Capra_hircus
ENSLOCG00000004160	dbr1	100	56.940	ENSTSYG00000005317	DBR1	99	56.499	Carlito_syrichta
ENSLOCG00000004160	dbr1	98	56.115	ENSCPOG00000006179	DBR1	78	64.336	Cavia_porcellus
ENSLOCG00000004160	dbr1	98	60.000	ENSCCAG00000025708	DBR1	79	69.464	Cebus_capucinus
ENSLOCG00000004160	dbr1	98	59.232	ENSCATG00000032054	DBR1	99	54.991	Cercocebus_atys
ENSLOCG00000004160	dbr1	89	70.588	ENSCHOG00000000730	DBR1	68	70.588	Choloepus_hoffmanni
ENSLOCG00000004160	dbr1	99	59.173	ENSCPBG00000007633	DBR1	90	58.528	Chrysemys_picta_bellii
ENSLOCG00000004160	dbr1	79	51.577	ENSCING00000011388	-	90	54.822	Ciona_intestinalis
ENSLOCG00000004160	dbr1	67	55.820	ENSCSAVG00000007545	-	100	55.820	Ciona_savignyi
ENSLOCG00000004160	dbr1	99	59.420	ENSCANG00000024237	DBR1	79	68.998	Colobus_angolensis_palliatus
ENSLOCG00000004160	dbr1	99	57.093	ENSCGRG00001018497	Dbr1	100	58.140	Cricetulus_griseus_chok1gshd
ENSLOCG00000004160	dbr1	99	52.604	ENSCGRG00000005958	Dbr1	99	53.501	Cricetulus_griseus_crigri
ENSLOCG00000004160	dbr1	99	65.256	ENSCSEG00000002813	dbr1	99	65.125	Cynoglossus_semilaevis
ENSLOCG00000004160	dbr1	99	65.432	ENSCVAG00000019969	dbr1	100	64.831	Cyprinodon_variegatus
ENSLOCG00000004160	dbr1	99	67.016	ENSDARG00000056923	dbr1	99	66.667	Danio_rerio
ENSLOCG00000004160	dbr1	76	69.626	ENSDNOG00000043630	DBR1	78	69.697	Dasypus_novemcinctus
ENSLOCG00000004160	dbr1	67	52.482	FBgn0035838	ldbr	78	52.594	Drosophila_melanogaster
ENSLOCG00000004160	dbr1	58	83.582	ENSETEG00000011830	DBR1	59	83.582	Echinops_telfairi
ENSLOCG00000004160	dbr1	99	47.766	ENSEBUG00000007494	dbr1	75	55.196	Eptatretus_burgeri
ENSLOCG00000004160	dbr1	98	58.303	ENSEASG00005003788	DBR1	78	67.832	Equus_asinus_asinus
ENSLOCG00000004160	dbr1	98	58.484	ENSECAG00000013920	DBR1	78	68.065	Equus_caballus
ENSLOCG00000004160	dbr1	99	49.644	ENSEEUG00000007059	DBR1	78	57.110	Erinaceus_europaeus
ENSLOCG00000004160	dbr1	99	67.434	ENSELUG00000005587	dbr1	100	67.080	Esox_lucius
ENSLOCG00000004160	dbr1	98	58.303	ENSFCAG00000002229	DBR1	78	68.065	Felis_catus
ENSLOCG00000004160	dbr1	99	58.916	ENSFALG00000013467	DBR1	86	59.091	Ficedula_albicollis
ENSLOCG00000004160	dbr1	77	67.667	ENSFDAG00000009524	DBR1	79	67.832	Fukomys_damarensis
ENSLOCG00000004160	dbr1	100	65.133	ENSFHEG00000001743	dbr1	100	65.310	Fundulus_heteroclitus
ENSLOCG00000004160	dbr1	99	62.676	ENSGMOG00000006925	dbr1	99	63.556	Gadus_morhua
ENSLOCG00000004160	dbr1	99	52.289	ENSGALG00000043797	DBR1	99	51.332	Gallus_gallus
ENSLOCG00000004160	dbr1	100	66.190	ENSGAFG00000001046	dbr1	100	64.401	Gambusia_affinis
ENSLOCG00000004160	dbr1	99	65.310	ENSGACG00000009122	dbr1	99	64.134	Gasterosteus_aculeatus
ENSLOCG00000004160	dbr1	99	58.275	ENSGAGG00000001244	DBR1	100	57.500	Gopherus_agassizii
ENSLOCG00000004160	dbr1	98	53.534	ENSGGOG00000004564	DBR1	99	52.787	Gorilla_gorilla
ENSLOCG00000004160	dbr1	100	66.373	ENSHBUG00000000882	dbr1	100	66.081	Haplochromis_burtoni
ENSLOCG00000004160	dbr1	79	67.120	ENSHGLG00000014529	Dbr1	79	67.832	Heterocephalus_glaber_female
ENSLOCG00000004160	dbr1	79	67.120	ENSHGLG00100013202	Dbr1	79	67.832	Heterocephalus_glaber_male
ENSLOCG00000004160	dbr1	99	66.432	ENSHCOG00000004179	dbr1	100	66.018	Hippocampus_comes
ENSLOCG00000004160	dbr1	99	69.138	ENSIPUG00000023749	dbr1	100	68.522	Ictalurus_punctatus
ENSLOCG00000004160	dbr1	77	67.667	ENSSTOG00000007122	DBR1	78	67.832	Ictidomys_tridecemlineatus
ENSLOCG00000004160	dbr1	99	58.615	ENSJJAG00000017080	Dbr1	78	68.531	Jaculus_jaculus
ENSLOCG00000004160	dbr1	99	63.588	ENSKMAG00000004869	dbr1	100	63.799	Kryptolebias_marmoratus
ENSLOCG00000004160	dbr1	99	66.961	ENSLBEG00000021307	dbr1	99	66.138	Labrus_bergylta
ENSLOCG00000004160	dbr1	99	61.812	ENSLACG00000005547	DBR1	100	60.714	Latimeria_chalumnae
ENSLOCG00000004160	dbr1	99	58.633	ENSLAFG00000005827	DBR1	79	67.832	Loxodonta_africana
ENSLOCG00000004160	dbr1	77	68.591	ENSMFAG00000043642	DBR1	78	68.765	Macaca_fascicularis
ENSLOCG00000004160	dbr1	77	68.591	ENSMMUG00000021284	DBR1	78	68.765	Macaca_mulatta
ENSLOCG00000004160	dbr1	77	68.591	ENSMNEG00000041740	DBR1	78	68.765	Macaca_nemestrina
ENSLOCG00000004160	dbr1	71	53.769	ENSMLEG00000034542	DBR1	70	55.405	Mandrillus_leucophaeus
ENSLOCG00000004160	dbr1	99	66.901	ENSMAMG00000012205	dbr1	99	66.373	Mastacembelus_armatus
ENSLOCG00000004160	dbr1	100	66.373	ENSMZEG00005021338	dbr1	100	66.081	Maylandia_zebra
ENSLOCG00000004160	dbr1	98	57.447	ENSMICG00000049533	DBR1	78	68.065	Microcebus_murinus
ENSLOCG00000004160	dbr1	99	57.734	ENSMOCG00000018746	Dbr1	80	66.900	Microtus_ochrogaster
ENSLOCG00000004160	dbr1	99	64.273	ENSMMOG00000000719	dbr1	99	63.573	Mola_mola
ENSLOCG00000004160	dbr1	99	59.286	ENSMODG00000018554	DBR1	100	57.857	Monodelphis_domestica
ENSLOCG00000004160	dbr1	99	65.324	ENSMALG00000022283	dbr1	97	64.510	Monopterus_albus
ENSLOCG00000004160	dbr1	98	58.877	MGP_CAROLIEiJ_G0032564	Dbr1	95	68.354	Mus_caroli
ENSLOCG00000004160	dbr1	99	57.271	ENSMUSG00000032469	Dbr1	95	68.354	Mus_musculus
ENSLOCG00000004160	dbr1	99	58.497	MGP_PahariEiJ_G0015433	Dbr1	95	68.354	Mus_pahari
ENSLOCG00000004160	dbr1	99	57.500	MGP_SPRETEiJ_G0033708	Dbr1	95	68.354	Mus_spretus
ENSLOCG00000004160	dbr1	98	57.810	ENSMPUG00000009230	DBR1	78	67.599	Mustela_putorius_furo
ENSLOCG00000004160	dbr1	98	59.246	ENSMLUG00000026117	DBR1	78	67.366	Myotis_lucifugus
ENSLOCG00000004160	dbr1	100	66.726	ENSNBRG00000016318	dbr1	100	66.254	Neolamprologus_brichardi
ENSLOCG00000004160	dbr1	99	57.570	ENSNLEG00000032263	DBR1	98	56.894	Nomascus_leucogenys
ENSLOCG00000004160	dbr1	99	59.099	ENSMEUG00000009188	DBR1	99	57.989	Notamacropus_eugenii
ENSLOCG00000004160	dbr1	93	50.662	ENSOPRG00000016510	DBR1	77	60.051	Ochotona_princeps
ENSLOCG00000004160	dbr1	99	57.651	ENSODEG00000018178	DBR1	99	57.651	Octodon_degus
ENSLOCG00000004160	dbr1	100	65.785	ENSONIG00000013801	dbr1	100	65.739	Oreochromis_niloticus
ENSLOCG00000004160	dbr1	88	59.200	ENSOANG00000007783	DBR1	100	57.677	Ornithorhynchus_anatinus
ENSLOCG00000004160	dbr1	93	56.629	ENSOCUG00000015129	DBR1	70	67.322	Oryctolagus_cuniculus
ENSLOCG00000004160	dbr1	100	66.369	ENSORLG00015001112	dbr1	99	65.295	Oryzias_latipes_hsok
ENSLOCG00000004160	dbr1	100	67.084	ENSOMEG00000000857	dbr1	99	65.116	Oryzias_melastigma
ENSLOCG00000004160	dbr1	77	67.898	ENSOGAG00000033095	DBR1	78	68.065	Otolemur_garnettii
ENSLOCG00000004160	dbr1	99	56.584	ENSOARG00000007589	DBR1	78	65.268	Ovis_aries
ENSLOCG00000004160	dbr1	98	57.774	ENSPPAG00000031137	DBR1	99	56.969	Pan_paniscus
ENSLOCG00000004160	dbr1	98	58.303	ENSPPRG00000013629	DBR1	78	68.065	Panthera_pardus
ENSLOCG00000004160	dbr1	96	57.749	ENSPTIG00000012674	DBR1	76	67.626	Panthera_tigris_altaica
ENSLOCG00000004160	dbr1	98	57.774	ENSPTRG00000015441	DBR1	99	56.969	Pan_troglodytes
ENSLOCG00000004160	dbr1	77	68.591	ENSPANG00000012664	DBR1	78	68.765	Papio_anubis
ENSLOCG00000004160	dbr1	99	69.947	ENSPKIG00000000310	dbr1	99	69.244	Paramormyrops_kingsleyae
ENSLOCG00000004160	dbr1	88	57.171	ENSPSIG00000015486	DBR1	100	56.855	Pelodiscus_sinensis
ENSLOCG00000004160	dbr1	98	56.909	ENSPEMG00000020602	Dbr1	78	66.667	Peromyscus_maniculatus_bairdii
ENSLOCG00000004160	dbr1	67	62.963	ENSPMAG00000008620	dbr1	99	62.963	Petromyzon_marinus
ENSLOCG00000004160	dbr1	70	59.033	ENSPLAG00000002421	-	99	56.489	Poecilia_latipinna
ENSLOCG00000004160	dbr1	100	66.726	ENSPLAG00000011665	dbr1	100	65.832	Poecilia_latipinna
ENSLOCG00000004160	dbr1	100	66.905	ENSPMEG00000010080	dbr1	100	66.190	Poecilia_mexicana
ENSLOCG00000004160	dbr1	76	56.501	ENSPMEG00000020884	-	98	55.556	Poecilia_mexicana
ENSLOCG00000004160	dbr1	100	66.014	ENSPREG00000020157	dbr1	100	65.295	Poecilia_reticulata
ENSLOCG00000004160	dbr1	99	57.923	ENSPPYG00000014139	DBR1	99	57.243	Pongo_abelii
ENSLOCG00000004160	dbr1	68	70.976	ENSPCAG00000012956	DBR1	97	70.976	Procavia_capensis
ENSLOCG00000004160	dbr1	98	58.545	ENSPCOG00000016894	DBR1	78	68.298	Propithecus_coquereli
ENSLOCG00000004160	dbr1	98	50.000	ENSPVAG00000007713	DBR1	78	57.110	Pteropus_vampyrus
ENSLOCG00000004160	dbr1	100	67.080	ENSPNYG00000015453	dbr1	100	66.726	Pundamilia_nyererei
ENSLOCG00000004160	dbr1	99	68.706	ENSPNAG00000025595	dbr1	100	68.421	Pygocentrus_nattereri
ENSLOCG00000004160	dbr1	99	57.961	ENSRNOG00000014588	Dbr1	78	66.667	Rattus_norvegicus
ENSLOCG00000004160	dbr1	98	59.091	ENSRBIG00000045002	DBR1	99	54.261	Rhinopithecus_bieti
ENSLOCG00000004160	dbr1	98	59.091	ENSRROG00000044819	DBR1	99	54.261	Rhinopithecus_roxellana
ENSLOCG00000004160	dbr1	54	38.827	YKL149C	DBR1	87	38.827	Saccharomyces_cerevisiae
ENSLOCG00000004160	dbr1	98	59.818	ENSSBOG00000032048	DBR1	99	59.107	Saimiri_boliviensis_boliviensis
ENSLOCG00000004160	dbr1	99	58.676	ENSSHAG00000006752	DBR1	100	57.143	Sarcophilus_harrisii
ENSLOCG00000004160	dbr1	99	70.928	ENSSFOG00015011410	dbr1	99	70.280	Scleropages_formosus
ENSLOCG00000004160	dbr1	99	65.729	ENSSMAG00000016078	dbr1	99	66.430	Scophthalmus_maximus
ENSLOCG00000004160	dbr1	99	66.025	ENSSDUG00000017849	dbr1	99	65.794	Seriola_dumerili
ENSLOCG00000004160	dbr1	99	65.905	ENSSLDG00000019891	dbr1	99	65.088	Seriola_lalandi_dorsalis
ENSLOCG00000004160	dbr1	100	52.669	ENSSARG00000009558	-	79	61.717	Sorex_araneus
ENSLOCG00000004160	dbr1	53	70.667	ENSSARG00000003148	-	74	70.667	Sorex_araneus
ENSLOCG00000004160	dbr1	93	54.231	ENSSPUG00000004724	DBR1	97	53.167	Sphenodon_punctatus
ENSLOCG00000004160	dbr1	100	65.371	ENSSPAG00000016892	dbr1	100	65.664	Stegastes_partitus
ENSLOCG00000004160	dbr1	99	57.885	ENSSSCG00000031098	DBR1	79	67.133	Sus_scrofa
ENSLOCG00000004160	dbr1	100	62.345	ENSTRUG00000021594	dbr1	99	61.307	Takifugu_rubripes
ENSLOCG00000004160	dbr1	99	63.830	ENSTNIG00000006710	dbr1	99	64.413	Tetraodon_nigroviridis
ENSLOCG00000004160	dbr1	99	58.676	ENSTTRG00000004020	DBR1	78	68.531	Tursiops_truncatus
ENSLOCG00000004160	dbr1	99	57.500	ENSUAMG00000004639	DBR1	99	55.536	Ursus_americanus
ENSLOCG00000004160	dbr1	98	57.428	ENSUMAG00000015012	DBR1	78	67.366	Ursus_maritimus
ENSLOCG00000004160	dbr1	99	54.137	ENSVPAG00000011711	DBR1	78	62.238	Vicugna_pacos
ENSLOCG00000004160	dbr1	98	57.790	ENSVVUG00000026604	DBR1	78	67.599	Vulpes_vulpes
ENSLOCG00000004160	dbr1	99	58.875	ENSXETG00000027491	dbr1	99	58.554	Xenopus_tropicalis
ENSLOCG00000004160	dbr1	100	64.937	ENSXCOG00000018078	dbr1	100	65.653	Xiphophorus_couchianus
ENSLOCG00000004160	dbr1	100	66.011	ENSXMAG00000007311	dbr1	100	65.295	Xiphophorus_maculatus