EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004208 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 39083 bases
Position: chrLG24:1173598-1212680
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	1	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	2	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	3	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	4	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	5	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	6	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	7	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	8	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	9	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	10	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	11	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	12	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	13	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	14	15
ENSLOCP00000005031	zf-C2H2	PF00096.26	7.3e-117	15	15
ENSLOCP00000005031	zf-met	PF12874.7	4.5e-39	1	3
ENSLOCP00000005031	zf-met	PF12874.7	4.5e-39	2	3
ENSLOCP00000005031	zf-met	PF12874.7	4.5e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005039	-	3072	-	ENSLOCP00000005031	1024 (aa)	-	W5M9H2

Gene Model

Click here to download ENSLOCG00000004208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004208	-	99	33.529	ENSLOCG00000003238	si:dkey-89b17.4	99	37.313
ENSLOCG00000004208	-	99	46.073	ENSLOCG00000017422	-	78	46.073
ENSLOCG00000004208	-	100	41.410	ENSLOCG00000000714	-	97	41.410
ENSLOCG00000004208	-	96	38.028	ENSLOCG00000004443	snai1a	59	38.028
ENSLOCG00000004208	-	99	33.444	ENSLOCG00000016466	-	99	33.011
ENSLOCG00000004208	-	99	36.000	ENSLOCG00000014366	-	97	36.000
ENSLOCG00000004208	-	99	43.617	ENSLOCG00000009974	zbtb49	51	43.617
ENSLOCG00000004208	-	96	31.304	ENSLOCG00000005402	plag1	55	31.304
ENSLOCG00000004208	-	99	35.938	ENSLOCG00000011452	znf652	58	35.938
ENSLOCG00000004208	-	99	34.133	ENSLOCG00000000544	znf319b	89	34.521
ENSLOCG00000004208	-	81	31.638	ENSLOCG00000003801	hinfp	52	31.638
ENSLOCG00000004208	-	99	40.952	ENSLOCG00000003926	znf236	78	40.952
ENSLOCG00000004208	-	99	40.404	ENSLOCG00000014144	-	100	40.404
ENSLOCG00000004208	-	99	34.133	ENSLOCG00000003678	znf319b	89	34.521
ENSLOCG00000004208	-	79	52.174	ENSLOCG00000011702	rreb1b	71	35.000
ENSLOCG00000004208	-	99	42.683	ENSLOCG00000017864	-	99	42.683
ENSLOCG00000004208	-	75	30.526	ENSLOCG00000004586	zgc:112083	58	30.808
ENSLOCG00000004208	-	99	36.429	ENSLOCG00000004887	SNAI3	92	36.667
ENSLOCG00000004208	-	99	36.496	ENSLOCG00000005992	SNAI2	62	36.496
ENSLOCG00000004208	-	99	35.354	ENSLOCG00000009778	prdm5	76	35.354
ENSLOCG00000004208	-	99	40.854	ENSLOCG00000005750	gfi1b	64	40.854
ENSLOCG00000004208	-	99	42.328	ENSLOCG00000017736	znf648	71	42.328
ENSLOCG00000004208	-	99	45.946	ENSLOCG00000004661	-	99	45.946
ENSLOCG00000004208	-	99	49.091	ENSLOCG00000018285	-	100	49.091
ENSLOCG00000004208	-	99	37.037	ENSLOCG00000007573	scrt1b	61	37.037
ENSLOCG00000004208	-	99	57.143	ENSLOCG00000002427	sall4	58	57.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004208	-	86	34.641	ENSAPOG00000012437	-	96	32.237	Acanthochromis_polyacanthus
ENSLOCG00000004208	-	99	35.772	ENSAPOG00000022111	-	54	35.772	Acanthochromis_polyacanthus
ENSLOCG00000004208	-	99	40.773	ENSAPOG00000019138	-	79	40.773	Acanthochromis_polyacanthus
ENSLOCG00000004208	-	99	37.824	ENSACIG00000017892	-	97	37.824	Amphilophus_citrinellus
ENSLOCG00000004208	-	99	41.958	ENSACIG00000007464	-	65	41.958	Amphilophus_citrinellus
ENSLOCG00000004208	-	96	32.632	ENSACIG00000002944	-	96	32.632	Amphilophus_citrinellus
ENSLOCG00000004208	-	99	44.715	ENSACIG00000004641	-	66	44.715	Amphilophus_citrinellus
ENSLOCG00000004208	-	99	39.423	ENSAOCG00000014769	-	94	39.423	Amphiprion_ocellaris
ENSLOCG00000004208	-	99	39.597	ENSAOCG00000001325	-	76	39.597	Amphiprion_ocellaris
ENSLOCG00000004208	-	99	41.053	ENSAOCG00000015944	-	82	41.053	Amphiprion_ocellaris
ENSLOCG00000004208	-	99	44.030	ENSAOCG00000016897	-	64	44.030	Amphiprion_ocellaris
ENSLOCG00000004208	-	93	36.134	ENSAOCG00000006744	-	92	36.134	Amphiprion_ocellaris
ENSLOCG00000004208	-	99	37.131	ENSAPEG00000010013	-	85	36.759	Amphiprion_percula
ENSLOCG00000004208	-	99	44.030	ENSAPEG00000001556	-	64	44.030	Amphiprion_percula
ENSLOCG00000004208	-	99	33.043	ENSATEG00000018931	-	94	38.235	Anabas_testudineus
ENSLOCG00000004208	-	99	39.881	ENSACLG00000005694	-	52	36.923	Astatotilapia_calliptera
ENSLOCG00000004208	-	99	45.455	ENSACLG00000011658	-	93	45.455	Astatotilapia_calliptera
ENSLOCG00000004208	-	96	41.538	ENSAMXG00000029518	-	62	41.538	Astyanax_mexicanus
ENSLOCG00000004208	-	99	41.606	ENSCING00000002128	zf(c2h2)-35	70	41.606	Ciona_intestinalis
ENSLOCG00000004208	-	99	44.304	ENSCSEG00000010453	-	65	44.304	Cynoglossus_semilaevis
ENSLOCG00000004208	-	99	45.000	ENSCSEG00000010264	-	96	45.000	Cynoglossus_semilaevis
ENSLOCG00000004208	-	99	49.735	ENSCSEG00000008525	-	50	49.735	Cynoglossus_semilaevis
ENSLOCG00000004208	-	95	51.250	ENSCSEG00000015593	-	96	51.250	Cynoglossus_semilaevis
ENSLOCG00000004208	-	99	39.024	ENSCVAG00000003250	-	97	38.788	Cyprinodon_variegatus
ENSLOCG00000004208	-	99	46.429	ENSCVAG00000006484	-	55	46.429	Cyprinodon_variegatus
ENSLOCG00000004208	-	99	44.848	ENSCVAG00000006653	-	85	44.848	Cyprinodon_variegatus
ENSLOCG00000004208	-	92	44.048	ENSCVAG00000020141	-	90	43.023	Cyprinodon_variegatus
ENSLOCG00000004208	-	99	39.877	ENSCVAG00000015616	-	75	41.818	Cyprinodon_variegatus
ENSLOCG00000004208	-	98	44.211	ENSCVAG00000012682	-	94	42.593	Cyprinodon_variegatus
ENSLOCG00000004208	-	99	39.286	ENSEBUG00000007931	-	65	41.176	Eptatretus_burgeri
ENSLOCG00000004208	-	99	39.394	ENSEBUG00000002290	-	58	38.503	Eptatretus_burgeri
ENSLOCG00000004208	-	99	41.772	ENSELUG00000012088	-	51	39.080	Esox_lucius
ENSLOCG00000004208	-	99	46.324	ENSELUG00000001909	-	85	46.296	Esox_lucius
ENSLOCG00000004208	-	99	48.571	ENSELUG00000024007	-	83	40.000	Esox_lucius
ENSLOCG00000004208	-	99	39.560	ENSGAFG00000007528	-	71	42.202	Gambusia_affinis
ENSLOCG00000004208	-	98	41.379	ENSGAFG00000011998	-	55	41.379	Gambusia_affinis
ENSLOCG00000004208	-	99	37.759	ENSGAFG00000008204	-	75	37.759	Gambusia_affinis
ENSLOCG00000004208	-	99	44.961	ENSGAFG00000001879	-	73	44.961	Gambusia_affinis
ENSLOCG00000004208	-	99	36.923	ENSHBUG00000006656	-	64	36.923	Haplochromis_burtoni
ENSLOCG00000004208	-	99	41.463	ENSHCOG00000019389	-	69	41.463	Hippocampus_comes
ENSLOCG00000004208	-	94	45.977	ENSHCOG00000020670	-	86	45.977	Hippocampus_comes
ENSLOCG00000004208	-	99	46.429	ENSHCOG00000001873	-	77	46.429	Hippocampus_comes
ENSLOCG00000004208	-	99	31.746	ENSHCOG00000008227	-	58	31.746	Hippocampus_comes
ENSLOCG00000004208	-	99	39.552	ENSHCOG00000008213	-	50	39.552	Hippocampus_comes
ENSLOCG00000004208	-	99	46.429	ENSHCOG00000008550	-	77	46.429	Hippocampus_comes
ENSLOCG00000004208	-	99	42.544	ENSHCOG00000013489	-	96	42.544	Hippocampus_comes
ENSLOCG00000004208	-	99	44.000	ENSHCOG00000015497	-	79	44.000	Hippocampus_comes
ENSLOCG00000004208	-	95	33.140	ENSIPUG00000024004	-	92	33.140	Ictalurus_punctatus
ENSLOCG00000004208	-	99	30.137	ENSKMAG00000014184	-	54	34.302	Kryptolebias_marmoratus
ENSLOCG00000004208	-	99	39.394	ENSKMAG00000007699	-	73	39.394	Kryptolebias_marmoratus
ENSLOCG00000004208	-	99	37.895	ENSLBEG00000017407	-	65	37.895	Labrus_bergylta
ENSLOCG00000004208	-	99	41.566	ENSLBEG00000006161	-	93	41.566	Labrus_bergylta
ENSLOCG00000004208	-	99	43.529	ENSLBEG00000007106	-	79	43.529	Labrus_bergylta
ENSLOCG00000004208	-	99	37.113	ENSLBEG00000017424	-	99	37.113	Labrus_bergylta
ENSLOCG00000004208	-	99	40.541	ENSLBEG00000001132	-	95	37.931	Labrus_bergylta
ENSLOCG00000004208	-	99	41.290	ENSLBEG00000011210	-	57	41.290	Labrus_bergylta
ENSLOCG00000004208	-	99	37.705	ENSMZEG00005013907	-	85	37.705	Maylandia_zebra
ENSLOCG00000004208	-	99	50.435	ENSMMOG00000017592	-	53	50.435	Mola_mola
ENSLOCG00000004208	-	63	49.296	ENSMMOG00000013330	-	55	49.296	Mola_mola
ENSLOCG00000004208	-	99	41.463	ENSMALG00000004279	-	81	41.398	Monopterus_albus
ENSLOCG00000004208	-	99	40.000	ENSONIG00000007967	-	74	40.000	Oreochromis_niloticus
ENSLOCG00000004208	-	95	33.094	ENSORLG00000028711	-	96	33.094	Oryzias_latipes
ENSLOCG00000004208	-	99	42.466	ENSORLG00000021885	-	73	52.727	Oryzias_latipes
ENSLOCG00000004208	-	99	40.000	ENSORLG00020018921	-	89	40.000	Oryzias_latipes_hni
ENSLOCG00000004208	-	98	47.619	ENSORLG00020019227	-	56	45.631	Oryzias_latipes_hni
ENSLOCG00000004208	-	99	40.761	ENSORLG00015018099	-	76	40.761	Oryzias_latipes_hsok
ENSLOCG00000004208	-	99	38.509	ENSOMEG00000005578	-	76	38.509	Oryzias_melastigma
ENSLOCG00000004208	-	99	41.791	ENSPKIG00000005164	-	75	46.154	Paramormyrops_kingsleyae
ENSLOCG00000004208	-	99	46.199	ENSPMGG00000002661	-	90	42.963	Periophthalmus_magnuspinnatus
ENSLOCG00000004208	-	99	37.059	ENSPMGG00000019750	-	97	37.059	Periophthalmus_magnuspinnatus
ENSLOCG00000004208	-	99	45.614	ENSPMGG00000002659	-	88	44.915	Periophthalmus_magnuspinnatus
ENSLOCG00000004208	-	99	39.423	ENSPMGG00000006928	-	78	39.423	Periophthalmus_magnuspinnatus
ENSLOCG00000004208	-	99	44.286	ENSPMGG00000002455	-	96	44.286	Periophthalmus_magnuspinnatus
ENSLOCG00000004208	-	99	44.444	ENSPMGG00000007051	-	60	48.980	Periophthalmus_magnuspinnatus
ENSLOCG00000004208	-	99	35.882	ENSPMGG00000009571	-	79	40.206	Periophthalmus_magnuspinnatus
ENSLOCG00000004208	-	99	32.377	ENSPMAG00000004189	-	98	36.957	Petromyzon_marinus
ENSLOCG00000004208	-	99	37.158	ENSPMAG00000002022	-	100	37.158	Petromyzon_marinus
ENSLOCG00000004208	-	97	51.136	ENSPMAG00000000839	-	100	50.000	Petromyzon_marinus
ENSLOCG00000004208	-	99	33.333	ENSPFOG00000018860	-	99	33.566	Poecilia_formosa
ENSLOCG00000004208	-	100	39.683	ENSPFOG00000009491	-	54	39.683	Poecilia_formosa
ENSLOCG00000004208	-	99	41.818	ENSPLAG00000008941	-	88	41.818	Poecilia_latipinna
ENSLOCG00000004208	-	99	39.316	ENSPLAG00000014832	-	88	39.316	Poecilia_latipinna
ENSLOCG00000004208	-	99	42.553	ENSPLAG00000010067	-	79	42.553	Poecilia_latipinna
ENSLOCG00000004208	-	99	35.922	ENSPMEG00000002953	-	66	35.263	Poecilia_mexicana
ENSLOCG00000004208	-	100	39.683	ENSPMEG00000024117	-	51	46.000	Poecilia_mexicana
ENSLOCG00000004208	-	99	39.316	ENSPMEG00000005210	-	88	39.316	Poecilia_mexicana
ENSLOCG00000004208	-	99	40.566	ENSPREG00000002603	-	66	40.566	Poecilia_reticulata
ENSLOCG00000004208	-	99	40.179	ENSPREG00000009488	-	100	40.179	Poecilia_reticulata
ENSLOCG00000004208	-	99	46.154	ENSPNYG00000017888	-	57	46.154	Pundamilia_nyererei
ENSLOCG00000004208	-	99	37.278	ENSPNAG00000005946	-	96	34.634	Pygocentrus_nattereri
ENSLOCG00000004208	-	94	39.252	ENSSFOG00015011531	-	98	40.777	Scleropages_formosus
ENSLOCG00000004208	-	99	41.358	ENSSMAG00000008308	-	76	40.000	Scophthalmus_maximus
ENSLOCG00000004208	-	99	41.212	ENSSMAG00000013291	-	98	38.710	Scophthalmus_maximus
ENSLOCG00000004208	-	84	46.988	ENSSMAG00000004259	-	58	46.988	Scophthalmus_maximus
ENSLOCG00000004208	-	99	41.085	ENSSDUG00000013048	-	68	41.085	Seriola_dumerili
ENSLOCG00000004208	-	99	39.855	ENSSLDG00000014436	-	82	40.351	Seriola_lalandi_dorsalis
ENSLOCG00000004208	-	99	40.881	ENSSPAG00000011544	-	79	37.449	Stegastes_partitus
ENSLOCG00000004208	-	75	39.394	ENSSPAG00000005770	-	62	39.394	Stegastes_partitus
ENSLOCG00000004208	-	96	41.791	ENSSPAG00000011533	-	91	41.791	Stegastes_partitus
ENSLOCG00000004208	-	99	31.525	ENSXETG00000012506	znf91	100	31.605	Xenopus_tropicalis
ENSLOCG00000004208	-	98	45.652	ENSXCOG00000020768	-	83	45.652	Xiphophorus_couchianus
ENSLOCG00000004208	-	97	45.098	ENSXCOG00000000254	-	75	45.098	Xiphophorus_couchianus
ENSLOCG00000004208	-	99	41.379	ENSXCOG00000014360	-	51	41.379	Xiphophorus_couchianus
ENSLOCG00000004208	-	99	43.452	ENSXCOG00000003441	-	69	43.452	Xiphophorus_couchianus