EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004264 (Gene tree)
Gene ID: 102697188
Gene Symbol: SETX
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 23803 bases
Position: chrLG21:8429960-8453762
Accession: 102697188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005102	ResIII	PF04851.15	9.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005110	SETX-201	7558	XM_006640683	ENSLOCP00000005102	2398 (aa)	-	W5M9P3

Gene Model

Click here to download ENSLOCG00000004264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004264	SETX	91	55.760	ENSG00000107290	SETX	83	55.593	Homo_sapiens
ENSLOCG00000004264	SETX	82	52.484	ENSAMXG00000014406	-	88	43.150	Astyanax_mexicanus
ENSLOCG00000004264	SETX	90	56.093	ENSCJAG00000018245	SETX	82	56.093	Callithrix_jacchus
ENSLOCG00000004264	SETX	90	53.686	ENSCPOG00000001492	SETX	83	53.365	Cavia_porcellus
ENSLOCG00000004264	SETX	88	53.467	ENSCLAG00000012582	SETX	83	53.358	Chinchilla_lanigera
ENSLOCG00000004264	SETX	62	60.000	ENSETEG00000008111	-	57	60.000	Echinops_telfairi
ENSLOCG00000004264	SETX	86	55.024	ENSECAG00000012019	SETX	86	54.864	Equus_caballus
ENSLOCG00000004264	SETX	84	49.577	ENSELUG00000022536	-	85	46.015	Esox_lucius
ENSLOCG00000004264	SETX	87	55.760	ENSFCAG00000007102	SETX	82	55.593	Felis_catus
ENSLOCG00000004264	SETX	87	53.429	ENSFALG00000001464	SETX	87	53.205	Ficedula_albicollis
ENSLOCG00000004264	SETX	91	52.341	ENSGGOG00000027664	SETX	82	52.174	Gorilla_gorilla
ENSLOCG00000004264	SETX	84	48.203	ENSIPUG00000006685	setx	88	48.203	Ictalurus_punctatus
ENSLOCG00000004264	SETX	79	55.288	ENSMOCG00000000848	Setx	80	55.288	Microtus_ochrogaster
ENSLOCG00000004264	SETX	83	54.823	MGP_PahariEiJ_G0024821	Setx	81	54.823	Mus_pahari
ENSLOCG00000004264	SETX	88	55.034	ENSNLEG00000012839	SETX	82	54.698	Nomascus_leucogenys
ENSLOCG00000004264	SETX	80	54.044	ENSOCUG00000005616	SETX	70	54.044	Oryctolagus_cuniculus
ENSLOCG00000004264	SETX	91	54.545	ENSOGAG00000013387	SETX	83	54.386	Otolemur_garnettii
ENSLOCG00000004264	SETX	91	56.093	ENSPPAG00000004108	SETX	83	55.927	Pan_paniscus
ENSLOCG00000004264	SETX	89	54.067	ENSPPRG00000012867	SETX	83	53.907	Panthera_pardus
ENSLOCG00000004264	SETX	89	54.067	ENSPTIG00000021101	SETX	83	53.907	Panthera_tigris_altaica
ENSLOCG00000004264	SETX	91	56.093	ENSPTRG00000021495	SETX	83	55.927	Pan_troglodytes
ENSLOCG00000004264	SETX	99	42.973	ENSPKIG00000025162	SETX	96	42.771	Paramormyrops_kingsleyae
ENSLOCG00000004264	SETX	92	53.933	ENSSPUG00000016332	SETX	86	53.772	Sphenodon_punctatus
ENSLOCG00000004264	SETX	88	54.792	ENSSSCG00000005724	SETX	83	54.633	Sus_scrofa
ENSLOCG00000004264	SETX	87	53.846	ENSTGUG00000005117	SETX	87	52.540	Taeniopygia_guttata
ENSLOCG00000004264	SETX	66	37.200	ENSXETG00000006254	setx	66	37.237	Xenopus_tropicalis