EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004365 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 1293 bases
Position: chrLG9:6267463-6268755
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005213	RVT_1	PF00078.27	4.6e-20	1	2
ENSLOCP00000005213	RVT_1	PF00078.27	4.6e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005221	-	1215	-	ENSLOCP00000005213	405 (aa)	-	W5MA04

Gene Model

Click here to download ENSLOCG00000004365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004365	-	96	47.103	ENSLOCG00000006272	-	89	47.103
ENSLOCG00000004365	-	82	72.507	ENSLOCG00000016625	-	100	72.507
ENSLOCG00000004365	-	99	47.073	ENSLOCG00000008864	-	93	47.073
ENSLOCG00000004365	-	54	74.104	ENSLOCG00000007332	-	100	72.984
ENSLOCG00000004365	-	52	91.509	ENSLOCG00000011039	-	88	91.509
ENSLOCG00000004365	-	84	54.570	ENSLOCG00000016955	-	59	54.570
ENSLOCG00000004365	-	66	86.617	ENSLOCG00000017839	-	88	86.617
ENSLOCG00000004365	-	81	82.292	ENSLOCG00000017287	-	95	82.292
ENSLOCG00000004365	-	69	66.775	ENSLOCG00000015915	-	100	66.775

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004365	-	55	41.256	ENSEBUG00000002995	-	99	34.177	Eptatretus_burgeri
ENSLOCG00000004365	-	79	30.256	ENSMODG00000029011	-	77	30.256	Monodelphis_domestica
ENSLOCG00000004365	-	61	30.800	ENSSFOG00015020912	-	75	30.800	Scleropages_formosus
ENSLOCG00000004365	-	61	30.800	ENSSFOG00015001639	-	75	30.800	Scleropages_formosus