EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004415 (Gene tree)
Gene ID: 102695823
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 24615 bases
Position: chrLG27:9324017-9348631
Accession: 102695823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005276	Suf	PF05843.14	1.4e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005284	-	3791	XM_006642515	ENSLOCP00000005276	717 (aa)	XP_006642578	W5MA67

Gene Model

Click here to download ENSLOCG00000004415's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004415	cstf3	100	93.305	ENSG00000176102	CSTF3	100	93.305	Homo_sapiens
ENSLOCG00000004415	cstf3	100	94.429	ENSAPOG00000014054	cstf3	100	94.429	Acanthochromis_polyacanthus
ENSLOCG00000004415	cstf3	99	93.794	ENSAMEG00000007187	CSTF3	98	93.794	Ailuropoda_melanoleuca
ENSLOCG00000004415	cstf3	87	89.137	ENSACIG00000005539	cstf3	100	89.137	Amphilophus_citrinellus
ENSLOCG00000004415	cstf3	100	94.290	ENSAOCG00000010930	cstf3	100	94.290	Amphiprion_ocellaris
ENSLOCG00000004415	cstf3	100	94.290	ENSAPEG00000007903	cstf3	100	94.290	Amphiprion_percula
ENSLOCG00000004415	cstf3	100	94.290	ENSATEG00000000190	cstf3	100	94.290	Anabas_testudineus
ENSLOCG00000004415	cstf3	99	93.644	ENSAPLG00000007217	CSTF3	100	93.644	Anas_platyrhynchos
ENSLOCG00000004415	cstf3	100	92.340	ENSACAG00000002823	CSTF3	100	92.340	Anolis_carolinensis
ENSLOCG00000004415	cstf3	100	93.305	ENSANAG00000020699	CSTF3	100	93.305	Aotus_nancymaae
ENSLOCG00000004415	cstf3	98	94.610	ENSACLG00000007820	cstf3	100	93.872	Astatotilapia_calliptera
ENSLOCG00000004415	cstf3	100	92.758	ENSAMXG00000014198	cstf3	100	93.036	Astyanax_mexicanus
ENSLOCG00000004415	cstf3	100	93.305	ENSBTAG00000008617	CSTF3	100	93.472	Bos_taurus
ENSLOCG00000004415	cstf3	97	48.361	WBGene00006307	suf-1	99	48.361	Caenorhabditis_elegans
ENSLOCG00000004415	cstf3	100	93.305	ENSCJAG00000005533	CSTF3	100	93.305	Callithrix_jacchus
ENSLOCG00000004415	cstf3	100	93.166	ENSCAFG00000007264	CSTF3	100	93.166	Canis_familiaris
ENSLOCG00000004415	cstf3	99	93.653	ENSCAFG00020002715	CSTF3	99	93.653	Canis_lupus_dingo
ENSLOCG00000004415	cstf3	98	92.176	ENSCHIG00000016418	CSTF3	100	93.120	Capra_hircus
ENSLOCG00000004415	cstf3	99	93.794	ENSTSYG00000000451	CSTF3	99	97.333	Carlito_syrichta
ENSLOCG00000004415	cstf3	83	89.125	ENSCAPG00000010958	CSTF3	98	89.125	Cavia_aperea
ENSLOCG00000004415	cstf3	100	93.026	ENSCPOG00000005545	CSTF3	100	93.268	Cavia_porcellus
ENSLOCG00000004415	cstf3	100	93.305	ENSCCAG00000024790	CSTF3	96	97.333	Cebus_capucinus
ENSLOCG00000004415	cstf3	100	93.305	ENSCATG00000007080	CSTF3	100	93.305	Cercocebus_atys
ENSLOCG00000004415	cstf3	100	93.305	ENSCLAG00000016179	CSTF3	100	93.305	Chinchilla_lanigera
ENSLOCG00000004415	cstf3	78	98.120	ENSCHOG00000002497	CSTF3	79	98.120	Choloepus_hoffmanni
ENSLOCG00000004415	cstf3	100	93.593	ENSCPBG00000006753	CSTF3	100	93.593	Chrysemys_picta_bellii
ENSLOCG00000004415	cstf3	99	61.905	ENSCING00000006401	-	98	61.905	Ciona_intestinalis
ENSLOCG00000004415	cstf3	98	61.732	ENSCSAVG00000004851	-	100	61.732	Ciona_savignyi
ENSLOCG00000004415	cstf3	100	93.305	ENSCANG00000035468	CSTF3	100	93.305	Colobus_angolensis_palliatus
ENSLOCG00000004415	cstf3	100	92.748	ENSCGRG00001014773	Cstf3	100	92.748	Cricetulus_griseus_chok1gshd
ENSLOCG00000004415	cstf3	100	92.748	ENSCGRG00000004142	Cstf3	100	92.748	Cricetulus_griseus_crigri
ENSLOCG00000004415	cstf3	100	93.445	ENSCSEG00000014283	cstf3	100	93.445	Cynoglossus_semilaevis
ENSLOCG00000004415	cstf3	100	93.593	ENSCVAG00000019739	cstf3	100	93.593	Cyprinodon_variegatus
ENSLOCG00000004415	cstf3	100	94.561	ENSDARG00000018904	cstf3	100	94.561	Danio_rerio
ENSLOCG00000004415	cstf3	99	92.857	ENSDNOG00000007366	CSTF3	99	92.857	Dasypus_novemcinctus
ENSLOCG00000004415	cstf3	99	85.896	ENSDORG00000005898	Cstf3	99	85.896	Dipodomys_ordii
ENSLOCG00000004415	cstf3	98	57.320	FBgn0003559	su(f)	98	57.320	Drosophila_melanogaster
ENSLOCG00000004415	cstf3	90	87.695	ENSETEG00000017097	CSTF3	90	87.695	Echinops_telfairi
ENSLOCG00000004415	cstf3	84	74.338	ENSEBUG00000015459	cstf3	96	74.338	Eptatretus_burgeri
ENSLOCG00000004415	cstf3	98	93.714	ENSEASG00005019884	CSTF3	97	97.333	Equus_asinus_asinus
ENSLOCG00000004415	cstf3	98	93.714	ENSECAG00000023338	CSTF3	97	97.333	Equus_caballus
ENSLOCG00000004415	cstf3	100	88.285	ENSEEUG00000015167	CSTF3	100	88.285	Erinaceus_europaeus
ENSLOCG00000004415	cstf3	100	92.201	ENSELUG00000023393	cstf3	100	92.201	Esox_lucius
ENSLOCG00000004415	cstf3	100	93.166	ENSFCAG00000030711	CSTF3	100	93.166	Felis_catus
ENSLOCG00000004415	cstf3	93	94.294	ENSFALG00000010764	CSTF3	100	92.320	Ficedula_albicollis
ENSLOCG00000004415	cstf3	100	93.305	ENSFDAG00000012082	CSTF3	100	93.305	Fukomys_damarensis
ENSLOCG00000004415	cstf3	100	93.175	ENSFHEG00000020623	cstf3	100	93.175	Fundulus_heteroclitus
ENSLOCG00000004415	cstf3	100	92.211	ENSGMOG00000012275	cstf3	100	92.211	Gadus_morhua
ENSLOCG00000004415	cstf3	100	93.315	ENSGALG00000011685	CSTF3	100	93.315	Gallus_gallus
ENSLOCG00000004415	cstf3	100	93.593	ENSGAFG00000002181	cstf3	100	93.593	Gambusia_affinis
ENSLOCG00000004415	cstf3	100	93.733	ENSGACG00000015997	cstf3	100	93.733	Gasterosteus_aculeatus
ENSLOCG00000004415	cstf3	100	93.733	ENSGAGG00000006200	CSTF3	100	93.733	Gopherus_agassizii
ENSLOCG00000004415	cstf3	99	88.011	ENSGGOG00000026591	CSTF3	96	92.444	Gorilla_gorilla
ENSLOCG00000004415	cstf3	98	94.610	ENSHBUG00000016656	cstf3	100	93.872	Haplochromis_burtoni
ENSLOCG00000004415	cstf3	100	93.026	ENSHGLG00000017834	CSTF3	100	93.026	Heterocephalus_glaber_female
ENSLOCG00000004415	cstf3	100	93.026	ENSHGLG00100018042	CSTF3	100	93.026	Heterocephalus_glaber_male
ENSLOCG00000004415	cstf3	98	91.501	ENSHCOG00000015218	cstf3	100	90.947	Hippocampus_comes
ENSLOCG00000004415	cstf3	100	93.305	ENSIPUG00000013170	CSTF3	100	93.305	Ictalurus_punctatus
ENSLOCG00000004415	cstf3	100	93.305	ENSSTOG00000013306	CSTF3	100	93.305	Ictidomys_tridecemlineatus
ENSLOCG00000004415	cstf3	99	82.188	ENSJJAG00000018430	Cstf3	99	82.188	Jaculus_jaculus
ENSLOCG00000004415	cstf3	100	92.340	ENSKMAG00000010916	cstf3	100	92.340	Kryptolebias_marmoratus
ENSLOCG00000004415	cstf3	100	93.454	ENSLBEG00000002306	cstf3	100	93.454	Labrus_bergylta
ENSLOCG00000004415	cstf3	100	92.469	ENSLACG00000017296	CSTF3	100	92.469	Latimeria_chalumnae
ENSLOCG00000004415	cstf3	100	93.166	ENSLAFG00000008712	CSTF3	100	93.166	Loxodonta_africana
ENSLOCG00000004415	cstf3	100	93.305	ENSMFAG00000029516	CSTF3	100	93.305	Macaca_fascicularis
ENSLOCG00000004415	cstf3	100	93.305	ENSMMUG00000002542	CSTF3	100	93.305	Macaca_mulatta
ENSLOCG00000004415	cstf3	100	93.305	ENSMNEG00000021807	CSTF3	100	93.305	Macaca_nemestrina
ENSLOCG00000004415	cstf3	100	93.305	ENSMLEG00000039594	CSTF3	100	93.305	Mandrillus_leucophaeus
ENSLOCG00000004415	cstf3	100	94.568	ENSMAMG00000020423	cstf3	100	94.568	Mastacembelus_armatus
ENSLOCG00000004415	cstf3	98	94.610	ENSMZEG00005012082	cstf3	100	93.872	Maylandia_zebra
ENSLOCG00000004415	cstf3	100	93.175	ENSMGAG00000001383	CSTF3	100	93.175	Meleagris_gallopavo
ENSLOCG00000004415	cstf3	100	92.608	ENSMAUG00000002487	Cstf3	100	92.608	Mesocricetus_auratus
ENSLOCG00000004415	cstf3	100	93.305	ENSMICG00000004784	CSTF3	100	93.305	Microcebus_murinus
ENSLOCG00000004415	cstf3	100	92.748	ENSMOCG00000017583	Cstf3	100	92.748	Microtus_ochrogaster
ENSLOCG00000004415	cstf3	99	94.633	ENSMMOG00000016026	cstf3	94	94.633	Mola_mola
ENSLOCG00000004415	cstf3	100	92.887	ENSMODG00000009745	-	100	92.887	Monodelphis_domestica
ENSLOCG00000004415	cstf3	100	81.311	ENSMODG00000025205	-	100	81.311	Monodelphis_domestica
ENSLOCG00000004415	cstf3	100	93.872	ENSMALG00000012050	cstf3	100	93.872	Monopterus_albus
ENSLOCG00000004415	cstf3	100	92.748	MGP_CAROLIEiJ_G0024026	Cstf3	100	92.748	Mus_caroli
ENSLOCG00000004415	cstf3	100	92.748	ENSMUSG00000027176	Cstf3	100	92.748	Mus_musculus
ENSLOCG00000004415	cstf3	100	92.748	MGP_PahariEiJ_G0025464	Cstf3	100	92.748	Mus_pahari
ENSLOCG00000004415	cstf3	100	92.748	MGP_SPRETEiJ_G0024939	Cstf3	100	92.748	Mus_spretus
ENSLOCG00000004415	cstf3	100	93.305	ENSMPUG00000011457	CSTF3	100	93.305	Mustela_putorius_furo
ENSLOCG00000004415	cstf3	99	93.671	ENSMLUG00000003073	-	99	93.671	Myotis_lucifugus
ENSLOCG00000004415	cstf3	100	90.516	ENSMLUG00000026022	-	100	90.516	Myotis_lucifugus
ENSLOCG00000004415	cstf3	100	92.748	ENSNGAG00000010677	Cstf3	100	92.748	Nannospalax_galili
ENSLOCG00000004415	cstf3	87	94.080	ENSNBRG00000007345	cstf3	100	94.080	Neolamprologus_brichardi
ENSLOCG00000004415	cstf3	100	93.305	ENSNLEG00000017901	CSTF3	100	93.305	Nomascus_leucogenys
ENSLOCG00000004415	cstf3	73	91.778	ENSMEUG00000005640	-	100	91.778	Notamacropus_eugenii
ENSLOCG00000004415	cstf3	67	90.667	ENSOPRG00000000199	-	67	90.667	Ochotona_princeps
ENSLOCG00000004415	cstf3	100	93.166	ENSODEG00000016737	-	100	93.166	Octodon_degus
ENSLOCG00000004415	cstf3	89	81.289	ENSODEG00000006311	-	97	81.289	Octodon_degus
ENSLOCG00000004415	cstf3	98	94.610	ENSONIG00000005563	cstf3	100	93.872	Oreochromis_niloticus
ENSLOCG00000004415	cstf3	90	92.462	ENSOANG00000015140	CSTF3	100	92.462	Ornithorhynchus_anatinus
ENSLOCG00000004415	cstf3	100	93.305	ENSOCUG00000015417	CSTF3	100	93.305	Oryctolagus_cuniculus
ENSLOCG00000004415	cstf3	100	92.748	ENSORLG00000009762	cstf3	100	92.748	Oryzias_latipes
ENSLOCG00000004415	cstf3	100	92.748	ENSORLG00020005540	cstf3	100	92.748	Oryzias_latipes_hni
ENSLOCG00000004415	cstf3	100	92.608	ENSORLG00015003551	cstf3	100	92.608	Oryzias_latipes_hsok
ENSLOCG00000004415	cstf3	100	92.329	ENSOMEG00000003848	cstf3	100	92.329	Oryzias_melastigma
ENSLOCG00000004415	cstf3	100	92.917	ENSOGAG00000010229	CSTF3	100	92.917	Otolemur_garnettii
ENSLOCG00000004415	cstf3	90	93.157	ENSOARG00000017271	CSTF3	99	93.157	Ovis_aries
ENSLOCG00000004415	cstf3	99	90.268	ENSPPAG00000027358	CSTF3	99	90.268	Pan_paniscus
ENSLOCG00000004415	cstf3	100	93.166	ENSPPRG00000016852	CSTF3	100	93.166	Panthera_pardus
ENSLOCG00000004415	cstf3	100	93.166	ENSPTIG00000008716	CSTF3	100	93.166	Panthera_tigris_altaica
ENSLOCG00000004415	cstf3	100	93.305	ENSPTRG00000003485	CSTF3	100	93.305	Pan_troglodytes
ENSLOCG00000004415	cstf3	100	93.305	ENSPANG00000013722	CSTF3	100	93.305	Papio_anubis
ENSLOCG00000004415	cstf3	100	95.258	ENSPKIG00000023648	cstf3	100	95.258	Paramormyrops_kingsleyae
ENSLOCG00000004415	cstf3	100	93.733	ENSPSIG00000009173	CSTF3	100	93.733	Pelodiscus_sinensis
ENSLOCG00000004415	cstf3	76	96.892	ENSPMGG00000000164	cstf3	99	96.892	Periophthalmus_magnuspinnatus
ENSLOCG00000004415	cstf3	100	92.608	ENSPEMG00000011481	Cstf3	100	92.608	Peromyscus_maniculatus_bairdii
ENSLOCG00000004415	cstf3	99	79.044	ENSPMAG00000007282	cstf3	99	79.494	Petromyzon_marinus
ENSLOCG00000004415	cstf3	100	78.134	ENSPCIG00000030419	-	90	78.273	Phascolarctos_cinereus
ENSLOCG00000004415	cstf3	99	90.973	ENSPCIG00000026406	-	100	92.480	Phascolarctos_cinereus
ENSLOCG00000004415	cstf3	100	93.872	ENSPFOG00000017239	cstf3	100	93.872	Poecilia_formosa
ENSLOCG00000004415	cstf3	100	93.872	ENSPLAG00000009456	cstf3	100	93.872	Poecilia_latipinna
ENSLOCG00000004415	cstf3	100	93.872	ENSPMEG00000010320	cstf3	100	93.872	Poecilia_mexicana
ENSLOCG00000004415	cstf3	100	93.872	ENSPREG00000013549	cstf3	100	93.872	Poecilia_reticulata
ENSLOCG00000004415	cstf3	100	93.305	ENSPPYG00000003375	CSTF3	100	93.305	Pongo_abelii
ENSLOCG00000004415	cstf3	71	95.819	ENSPCAG00000008025	-	71	95.819	Procavia_capensis
ENSLOCG00000004415	cstf3	100	88.285	ENSPCOG00000014417	CSTF3	100	88.285	Propithecus_coquereli
ENSLOCG00000004415	cstf3	100	88.006	ENSPVAG00000002350	CSTF3	100	88.006	Pteropus_vampyrus
ENSLOCG00000004415	cstf3	98	94.610	ENSPNYG00000018259	cstf3	100	93.872	Pundamilia_nyererei
ENSLOCG00000004415	cstf3	100	94.840	ENSPNAG00000020182	cstf3	100	94.840	Pygocentrus_nattereri
ENSLOCG00000004415	cstf3	87	92.480	ENSRNOG00000012089	Cstf3	100	92.480	Rattus_norvegicus
ENSLOCG00000004415	cstf3	99	92.243	ENSRBIG00000044258	CSTF3	100	93.120	Rhinopithecus_bieti
ENSLOCG00000004415	cstf3	100	93.305	ENSRROG00000043450	CSTF3	100	93.305	Rhinopithecus_roxellana
ENSLOCG00000004415	cstf3	100	93.305	ENSSBOG00000024764	CSTF3	98	97.333	Saimiri_boliviensis_boliviensis
ENSLOCG00000004415	cstf3	100	82.148	ENSSHAG00000003135	-	99	82.148	Sarcophilus_harrisii
ENSLOCG00000004415	cstf3	100	92.190	ENSSHAG00000018128	-	100	92.190	Sarcophilus_harrisii
ENSLOCG00000004415	cstf3	100	95.537	ENSSFOG00015022133	cstf3	100	95.537	Scleropages_formosus
ENSLOCG00000004415	cstf3	100	93.454	ENSSMAG00000002197	cstf3	100	93.454	Scophthalmus_maximus
ENSLOCG00000004415	cstf3	100	94.429	ENSSDUG00000020426	cstf3	100	94.429	Seriola_dumerili
ENSLOCG00000004415	cstf3	100	94.568	ENSSLDG00000025649	cstf3	100	94.568	Seriola_lalandi_dorsalis
ENSLOCG00000004415	cstf3	100	93.305	ENSSARG00000000391	CSTF3	100	93.305	Sorex_araneus
ENSLOCG00000004415	cstf3	96	93.054	ENSSPUG00000010546	CSTF3	100	93.054	Sphenodon_punctatus
ENSLOCG00000004415	cstf3	100	94.290	ENSSPAG00000004958	cstf3	100	94.290	Stegastes_partitus
ENSLOCG00000004415	cstf3	99	92.598	ENSSSCG00000040954	CSTF3	100	92.598	Sus_scrofa
ENSLOCG00000004415	cstf3	99	93.220	ENSTGUG00000005010	CSTF3	100	93.220	Taeniopygia_guttata
ENSLOCG00000004415	cstf3	100	93.175	ENSTRUG00000004959	cstf3	100	93.175	Takifugu_rubripes
ENSLOCG00000004415	cstf3	99	94.350	ENSTNIG00000013811	cstf3	98	94.350	Tetraodon_nigroviridis
ENSLOCG00000004415	cstf3	90	90.343	ENSTBEG00000001544	CSTF3	90	90.343	Tupaia_belangeri
ENSLOCG00000004415	cstf3	100	90.516	ENSTTRG00000016366	CSTF3	100	90.516	Tursiops_truncatus
ENSLOCG00000004415	cstf3	99	93.653	ENSUMAG00000018971	CSTF3	100	93.120	Ursus_maritimus
ENSLOCG00000004415	cstf3	100	93.166	ENSVPAG00000007800	CSTF3	100	93.166	Vicugna_pacos
ENSLOCG00000004415	cstf3	99	93.653	ENSVVUG00000014938	CSTF3	100	93.120	Vulpes_vulpes
ENSLOCG00000004415	cstf3	88	76.562	ENSXETG00000021399	cstf3	100	77.670	Xenopus_tropicalis
ENSLOCG00000004415	cstf3	66	42.443	ENSXETG00000017946	-	99	42.443	Xenopus_tropicalis
ENSLOCG00000004415	cstf3	87	93.600	ENSXCOG00000011741	cstf3	100	93.600	Xiphophorus_couchianus
ENSLOCG00000004415	cstf3	100	93.733	ENSXMAG00000009545	cstf3	100	93.733	Xiphophorus_maculatus