EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004469 (Gene tree)
Gene ID: 102691595
Gene Symbol: zgc:56699
Alias: fk52a03|wu:fk52a03
Full Name: zgc:56699
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 3138 bases
Position: chrLG4:12264044-12267181
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005342	zf-U11-48K	PF05253.12	1.2e-13	1	2
ENSLOCP00000005342	zf-U11-48K	PF05253.12	1.2e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005350	-	438	-	ENSLOCP00000005342	145 (aa)	-	W5MAD3

Gene Model

Click here to download ENSLOCG00000004469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004469	zgc:56699	99	47.552	ENSAPOG00000021951	-	81	47.552	Acanthochromis_polyacanthus
ENSLOCG00000004469	zgc:56699	97	47.857	ENSAPOG00000000311	-	79	45.070	Acanthochromis_polyacanthus
ENSLOCG00000004469	zgc:56699	97	47.887	ENSACIG00000013400	zgc:56699	80	47.887	Amphilophus_citrinellus
ENSLOCG00000004469	zgc:56699	99	50.694	ENSAOCG00000013650	-	81	50.694	Amphiprion_ocellaris
ENSLOCG00000004469	zgc:56699	99	42.657	ENSAPEG00000006689	zgc:56699	77	42.657	Amphiprion_percula
ENSLOCG00000004469	zgc:56699	97	50.000	ENSATEG00000024058	zgc:56699	78	50.000	Anabas_testudineus
ENSLOCG00000004469	zgc:56699	97	43.750	ENSACLG00000023562	zgc:56699	73	43.750	Astatotilapia_calliptera
ENSLOCG00000004469	zgc:56699	99	47.333	ENSAMXG00000036095	-	63	46.405	Astyanax_mexicanus
ENSLOCG00000004469	zgc:56699	99	54.054	ENSAMXG00000038346	zgc:56699	82	52.703	Astyanax_mexicanus
ENSLOCG00000004469	zgc:56699	97	50.714	ENSCSEG00000021520	zgc:56699	67	50.714	Cynoglossus_semilaevis
ENSLOCG00000004469	zgc:56699	99	44.828	ENSCVAG00000009972	zgc:56699	74	43.357	Cyprinodon_variegatus
ENSLOCG00000004469	zgc:56699	99	53.425	ENSDARG00000000887	zgc:56699	80	53.425	Danio_rerio
ENSLOCG00000004469	zgc:56699	99	49.324	ENSDARG00000099586	CR382383.2	83	49.324	Danio_rerio
ENSLOCG00000004469	zgc:56699	78	38.793	ENSEBUG00000005577	-	61	38.261	Eptatretus_burgeri
ENSLOCG00000004469	zgc:56699	99	54.054	ENSELUG00000003242	gtsf1	81	53.378	Esox_lucius
ENSLOCG00000004469	zgc:56699	97	50.355	ENSFHEG00000006036	zgc:56699	74	44.286	Fundulus_heteroclitus
ENSLOCG00000004469	zgc:56699	97	41.429	ENSGMOG00000007295	zgc:56699	93	41.429	Gadus_morhua
ENSLOCG00000004469	zgc:56699	90	43.382	ENSGALG00000035365	-	54	47.368	Gallus_gallus
ENSLOCG00000004469	zgc:56699	97	49.645	ENSGAFG00000020743	zgc:56699	79	49.645	Gambusia_affinis
ENSLOCG00000004469	zgc:56699	97	43.750	ENSHBUG00000005327	zgc:56699	80	43.750	Haplochromis_burtoni
ENSLOCG00000004469	zgc:56699	97	46.479	ENSHCOG00000010296	-	81	46.479	Hippocampus_comes
ENSLOCG00000004469	zgc:56699	99	46.358	ENSIPUG00000011498	zgc:56699	79	45.638	Ictalurus_punctatus
ENSLOCG00000004469	zgc:56699	97	48.227	ENSLBEG00000015981	zgc:56699	77	40.000	Labrus_bergylta
ENSLOCG00000004469	zgc:56699	97	48.227	ENSMAMG00000001846	zgc:56699	80	48.227	Mastacembelus_armatus
ENSLOCG00000004469	zgc:56699	97	43.750	ENSMZEG00005026479	zgc:56699	73	43.750	Maylandia_zebra
ENSLOCG00000004469	zgc:56699	97	46.099	ENSMMOG00000017331	zgc:56699	74	46.429	Mola_mola
ENSLOCG00000004469	zgc:56699	97	43.056	ENSNBRG00000006336	zgc:56699	80	43.056	Neolamprologus_brichardi
ENSLOCG00000004469	zgc:56699	97	43.750	ENSONIG00000016720	zgc:56699	73	43.750	Oreochromis_niloticus
ENSLOCG00000004469	zgc:56699	85	40.157	ENSOANG00000030381	-	83	36.800	Ornithorhynchus_anatinus
ENSLOCG00000004469	zgc:56699	78	50.442	ENSORLG00000025877	-	69	50.442	Oryzias_latipes
ENSLOCG00000004469	zgc:56699	99	41.958	ENSORLG00000015258	-	80	41.958	Oryzias_latipes
ENSLOCG00000004469	zgc:56699	78	50.442	ENSORLG00020011013	-	69	50.442	Oryzias_latipes_hni
ENSLOCG00000004469	zgc:56699	99	42.657	ENSORLG00020010990	-	80	42.657	Oryzias_latipes_hni
ENSLOCG00000004469	zgc:56699	99	41.958	ENSORLG00015004961	zgc:56699	80	41.958	Oryzias_latipes_hsok
ENSLOCG00000004469	zgc:56699	97	45.714	ENSOMEG00000021773	-	78	45.714	Oryzias_melastigma
ENSLOCG00000004469	zgc:56699	98	44.366	ENSOMEG00000021739	-	81	44.366	Oryzias_melastigma
ENSLOCG00000004469	zgc:56699	99	55.921	ENSPKIG00000017039	zgc:56699	82	55.921	Paramormyrops_kingsleyae
ENSLOCG00000004469	zgc:56699	97	46.154	ENSPMGG00000023241	zgc:56699	77	46.154	Periophthalmus_magnuspinnatus
ENSLOCG00000004469	zgc:56699	77	39.167	ENSPMAG00000009653	-	66	45.882	Petromyzon_marinus
ENSLOCG00000004469	zgc:56699	97	49.645	ENSPFOG00000009204	zgc:56699	79	49.645	Poecilia_formosa
ENSLOCG00000004469	zgc:56699	97	46.479	ENSPLAG00000009088	zgc:56699	77	46.479	Poecilia_latipinna
ENSLOCG00000004469	zgc:56699	97	49.645	ENSPMEG00000001443	zgc:56699	79	49.645	Poecilia_mexicana
ENSLOCG00000004469	zgc:56699	97	50.350	ENSPREG00000000745	zgc:56699	79	49.645	Poecilia_reticulata
ENSLOCG00000004469	zgc:56699	97	43.750	ENSPNYG00000002811	zgc:56699	80	43.750	Pundamilia_nyererei
ENSLOCG00000004469	zgc:56699	99	56.463	ENSPNAG00000005165	zgc:56699	81	56.463	Pygocentrus_nattereri
ENSLOCG00000004469	zgc:56699	99	52.778	ENSSFOG00015021600	zgc:56699	80	52.778	Scleropages_formosus
ENSLOCG00000004469	zgc:56699	97	50.355	ENSSMAG00000020886	zgc:56699	80	50.000	Scophthalmus_maximus
ENSLOCG00000004469	zgc:56699	97	49.645	ENSSDUG00000002033	zgc:56699	78	49.645	Seriola_dumerili
ENSLOCG00000004469	zgc:56699	97	48.936	ENSSLDG00000014113	zgc:56699	78	48.936	Seriola_lalandi_dorsalis
ENSLOCG00000004469	zgc:56699	84	46.400	ENSSPAG00000010005	-	80	46.400	Stegastes_partitus
ENSLOCG00000004469	zgc:56699	97	49.645	ENSSPAG00000019854	-	80	49.645	Stegastes_partitus
ENSLOCG00000004469	zgc:56699	97	46.429	ENSTRUG00000015537	zgc:56699	79	46.429	Takifugu_rubripes
ENSLOCG00000004469	zgc:56699	77	47.748	ENSTNIG00000012515	zgc:56699	62	57.143	Tetraodon_nigroviridis
ENSLOCG00000004469	zgc:56699	97	45.390	ENSXCOG00000014400	zgc:56699	68	45.390	Xiphophorus_couchianus
ENSLOCG00000004469	zgc:56699	97	49.645	ENSXMAG00000011692	zgc:56699	79	49.645	Xiphophorus_maculatus