EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004586 (Gene tree)
Gene ID: 102684192
Gene Symbol: zgc:112083
Alias: im:7144560|wu:fb73f06
Full Name: histone H4 transcription factor-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 7646 bases
Position: chrLG3:6010626-6018271
Accession: 102684192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005495	zf-C2H2	PF00096.26	6.1e-17	1	2
ENSLOCP00000005495	zf-C2H2	PF00096.26	6.1e-17	2	2
ENSLOCP00000005495	zf-met	PF12874.7	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005503	-	3301	XM_006627767	ENSLOCP00000005495	507 (aa)	XP_015196605	W5MAT6

Gene Model

Click here to download ENSLOCG00000004586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004586	zgc:112083	96	46.774	ENSLOCG00000003801	hinfp	98	46.774
ENSLOCG00000004586	zgc:112083	53	31.088	ENSLOCG00000016466	-	95	31.088
ENSLOCG00000004586	zgc:112083	57	34.426	ENSLOCG00000003926	znf236	58	34.426
ENSLOCG00000004586	zgc:112083	58	30.808	ENSLOCG00000004208	-	75	30.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004586	zgc:112083	82	49.640	ENSAPOG00000016594	hinfp	81	49.640	Acanthochromis_polyacanthus
ENSLOCG00000004586	zgc:112083	85	48.387	ENSAOCG00000014008	hinfp	86	48.387	Amphiprion_ocellaris
ENSLOCG00000004586	zgc:112083	85	48.506	ENSAPEG00000002011	hinfp	86	48.506	Amphiprion_percula
ENSLOCG00000004586	zgc:112083	85	48.387	ENSACLG00000014969	hinfp	86	48.618	Astatotilapia_calliptera
ENSLOCG00000004586	zgc:112083	96	46.154	ENSAMXG00000003514	hinfp	97	46.154	Astyanax_mexicanus
ENSLOCG00000004586	zgc:112083	97	47.071	ENSCPBG00000012908	-	98	47.071	Chrysemys_picta_bellii
ENSLOCG00000004586	zgc:112083	80	49.515	ENSCVAG00000012763	hinfp	81	50.000	Cyprinodon_variegatus
ENSLOCG00000004586	zgc:112083	96	45.082	ENSDARG00000004851	hinfp	98	45.082	Danio_rerio
ENSLOCG00000004586	zgc:112083	98	73.016	ENSDARG00000037405	zgc:112083	100	73.016	Danio_rerio
ENSLOCG00000004586	zgc:112083	98	39.423	ENSEBUG00000007941	hinfp	83	43.885	Eptatretus_burgeri
ENSLOCG00000004586	zgc:112083	77	49.872	ENSFHEG00000003465	hinfp	81	49.618	Fundulus_heteroclitus
ENSLOCG00000004586	zgc:112083	79	51.111	ENSGMOG00000005447	hinfp	98	51.111	Gadus_morhua
ENSLOCG00000004586	zgc:112083	77	50.127	ENSGAFG00000004250	hinfp	79	50.380	Gambusia_affinis
ENSLOCG00000004586	zgc:112083	76	49.367	ENSGACG00000020411	hinfp	96	49.367	Gasterosteus_aculeatus
ENSLOCG00000004586	zgc:112083	97	47.904	ENSGAGG00000009315	-	98	47.904	Gopherus_agassizii
ENSLOCG00000004586	zgc:112083	89	46.667	ENSGGOG00000008087	HINFP	98	43.860	Gorilla_gorilla
ENSLOCG00000004586	zgc:112083	85	48.499	ENSHBUG00000023339	hinfp	86	48.499	Haplochromis_burtoni
ENSLOCG00000004586	zgc:112083	91	43.816	ENSHCOG00000002113	hinfp	86	46.948	Hippocampus_comes
ENSLOCG00000004586	zgc:112083	96	47.400	ENSIPUG00000008809	hinfp	81	52.970	Ictalurus_punctatus
ENSLOCG00000004586	zgc:112083	98	63.922	ENSKMAG00000019874	zgc:112083	100	64.118	Kryptolebias_marmoratus
ENSLOCG00000004586	zgc:112083	86	47.608	ENSKMAG00000008905	hinfp	82	49.510	Kryptolebias_marmoratus
ENSLOCG00000004586	zgc:112083	85	45.682	ENSLBEG00000024749	hinfp	84	47.156	Labrus_bergylta
ENSLOCG00000004586	zgc:112083	89	45.417	ENSMFAG00000035740	HINFP	98	43.555	Macaca_fascicularis
ENSLOCG00000004586	zgc:112083	85	48.499	ENSMZEG00005016624	hinfp	86	48.499	Maylandia_zebra
ENSLOCG00000004586	zgc:112083	96	45.328	ENSMGAG00000002682	HINFP	94	45.328	Meleagris_gallopavo
ENSLOCG00000004586	zgc:112083	81	47.826	ENSMMOG00000016620	hinfp	90	46.560	Mola_mola
ENSLOCG00000004586	zgc:112083	99	43.249	ENSMALG00000017304	hinfp	82	49.275	Monopterus_albus
ENSLOCG00000004586	zgc:112083	85	48.499	ENSNBRG00000020685	hinfp	86	48.499	Neolamprologus_brichardi
ENSLOCG00000004586	zgc:112083	89	46.667	ENSNLEG00000007387	HINFP	94	45.749	Nomascus_leucogenys
ENSLOCG00000004586	zgc:112083	85	48.730	ENSONIG00000005379	hinfp	86	48.730	Oreochromis_niloticus
ENSLOCG00000004586	zgc:112083	83	48.000	ENSOMEG00000000955	hinfp	86	47.991	Oryzias_melastigma
ENSLOCG00000004586	zgc:112083	89	46.667	ENSPPAG00000042389	HINFP	98	43.860	Pan_paniscus
ENSLOCG00000004586	zgc:112083	89	46.667	ENSPTRG00000004372	HINFP	98	43.860	Pan_troglodytes
ENSLOCG00000004586	zgc:112083	99	46.078	ENSPKIG00000018654	hinfp	100	46.154	Paramormyrops_kingsleyae
ENSLOCG00000004586	zgc:112083	98	79.800	ENSPKIG00000012562	zgc:112083	100	79.800	Paramormyrops_kingsleyae
ENSLOCG00000004586	zgc:112083	98	62.157	ENSPMGG00000011183	zgc:112083	100	61.133	Periophthalmus_magnuspinnatus
ENSLOCG00000004586	zgc:112083	77	50.636	ENSPFOG00000010093	hinfp	80	50.891	Poecilia_formosa
ENSLOCG00000004586	zgc:112083	77	50.636	ENSPLAG00000015218	hinfp	80	50.891	Poecilia_latipinna
ENSLOCG00000004586	zgc:112083	77	50.636	ENSPMEG00000008910	hinfp	80	50.891	Poecilia_mexicana
ENSLOCG00000004586	zgc:112083	77	50.382	ENSPREG00000022954	hinfp	79	50.380	Poecilia_reticulata
ENSLOCG00000004586	zgc:112083	85	48.499	ENSPNYG00000017332	hinfp	86	48.499	Pundamilia_nyererei
ENSLOCG00000004586	zgc:112083	96	46.531	ENSPNAG00000012579	hinfp	78	54.026	Pygocentrus_nattereri
ENSLOCG00000004586	zgc:112083	98	77.400	ENSPNAG00000013245	zgc:112083	100	77.108	Pygocentrus_nattereri
ENSLOCG00000004586	zgc:112083	99	44.990	ENSSFOG00015008241	hinfp	100	44.990	Scleropages_formosus
ENSLOCG00000004586	zgc:112083	98	79.400	ENSSFOG00015002582	zgc:112083	100	79.400	Scleropages_formosus
ENSLOCG00000004586	zgc:112083	87	45.106	ENSSMAG00000014076	hinfp	82	48.786	Scophthalmus_maximus
ENSLOCG00000004586	zgc:112083	99	43.774	ENSSDUG00000010783	hinfp	86	48.741	Seriola_dumerili
ENSLOCG00000004586	zgc:112083	99	43.774	ENSSLDG00000018686	hinfp	86	48.741	Seriola_lalandi_dorsalis
ENSLOCG00000004586	zgc:112083	86	42.563	ENSSPAG00000016177	hinfp	81	44.417	Stegastes_partitus
ENSLOCG00000004586	zgc:112083	77	49.367	ENSTRUG00000016621	hinfp	86	49.618	Takifugu_rubripes
ENSLOCG00000004586	zgc:112083	81	48.317	ENSTNIG00000011746	hinfp	99	49.275	Tetraodon_nigroviridis
ENSLOCG00000004586	zgc:112083	77	50.127	ENSXCOG00000006699	hinfp	79	50.633	Xiphophorus_couchianus
ENSLOCG00000004586	zgc:112083	77	50.127	ENSXMAG00000005943	hinfp	82	50.633	Xiphophorus_maculatus