EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004675 (Gene tree)
Gene ID: 102685567
Gene Symbol: msi2b
Alias: zgc:174035|zgc:63812
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 220330 bases
Position: chrLG22:6391047-6611376
Accession: 102685567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005599	RRM_1	PF00076.22	3.7e-34	1	2
ENSLOCP00000005599	RRM_1	PF00076.22	3.7e-34	2	2
ENSLOCP00000005618	RRM_1	PF00076.22	6.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005626	-	543	-	ENSLOCP00000005618	123 (aa)	-	W5MB59
ENSLOCT00000005607	-	1373	XM_006640888	ENSLOCP00000005599	387 (aa)	XP_006640951	W5MB40

Gene Model

Click here to download ENSLOCG00000004675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004675	msi2b	59	45.946	ENSLOCG00000000106	-	61	45.946
ENSLOCG00000004675	msi2b	71	33.333	ENSLOCG00000012121	-	68	35.200
ENSLOCG00000004675	msi2b	71	68.966	ENSLOCG00000008618	zgc:110796	71	63.964
ENSLOCG00000004675	msi2b	76	55.914	ENSLOCG00000009773	hnrnpabb	68	41.600
ENSLOCG00000004675	msi2b	89	55.789	ENSLOCG00000010743	hnrnpd	64	50.926
ENSLOCG00000004675	msi2b	63	44.872	ENSLOCG00000000112	-	76	44.872
ENSLOCG00000004675	msi2b	67	45.783	ENSLOCG00000006986	hnrnpa3	50	41.860
ENSLOCG00000004675	msi2b	88	50.909	ENSLOCG00000010736	hnrnpdl	84	40.977
ENSLOCG00000004675	msi2b	70	32.955	ENSLOCG00000002772	rbm4.1	52	32.955
ENSLOCG00000004675	msi2b	64	48.718	ENSLOCG00000006476	-	53	40.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004675	msi2b	100	84.553	ENSG00000153944	MSI2	93	95.714	Homo_sapiens
ENSLOCG00000004675	msi2b	100	88.698	ENSAPOG00000001658	msi2a	100	97.119	Acanthochromis_polyacanthus
ENSLOCG00000004675	msi2b	95	82.514	ENSAMEG00000002697	MSI2	99	82.514	Ailuropoda_melanoleuca
ENSLOCG00000004675	msi2b	100	89.541	ENSACIG00000009475	msi2a	100	89.541	Amphilophus_citrinellus
ENSLOCG00000004675	msi2b	100	74.797	ENSAOCG00000014822	msi2a	69	80.000	Amphiprion_ocellaris
ENSLOCG00000004675	msi2b	100	86.992	ENSAPEG00000007706	msi2a	100	83.204	Amphiprion_percula
ENSLOCG00000004675	msi2b	100	88.698	ENSATEG00000010498	msi2a	100	97.119	Anabas_testudineus
ENSLOCG00000004675	msi2b	95	78.042	ENSATEG00000003301	-	100	78.042	Anabas_testudineus
ENSLOCG00000004675	msi2b	95	85.028	ENSACAG00000005452	MSI2	88	85.028	Anolis_carolinensis
ENSLOCG00000004675	msi2b	100	84.553	ENSANAG00000037827	MSI2	91	96.413	Aotus_nancymaae
ENSLOCG00000004675	msi2b	100	88.206	ENSACLG00000007752	msi2a	100	96.708	Astatotilapia_calliptera
ENSLOCG00000004675	msi2b	100	96.392	ENSAMXG00000010474	msi2b	100	96.392	Astyanax_mexicanus
ENSLOCG00000004675	msi2b	100	96.144	ENSAMXG00000032796	msi2a	100	96.144	Astyanax_mexicanus
ENSLOCG00000004675	msi2b	100	81.301	ENSBTAG00000004406	MSI2	82	97.297	Bos_taurus
ENSLOCG00000004675	msi2b	86	64.151	WBGene00003423	msi-1	73	62.500	Caenorhabditis_elegans
ENSLOCG00000004675	msi2b	100	84.553	ENSCJAG00000013998	MSI2	91	96.413	Callithrix_jacchus
ENSLOCG00000004675	msi2b	95	81.714	ENSCAFG00020025620	MSI2	72	94.470	Canis_lupus_dingo
ENSLOCG00000004675	msi2b	100	81.301	ENSCHIG00000016580	MSI2	100	78.295	Capra_hircus
ENSLOCG00000004675	msi2b	95	73.900	ENSCPOG00000034042	MSI2	99	73.900	Cavia_porcellus
ENSLOCG00000004675	msi2b	100	84.553	ENSCCAG00000033927	MSI2	91	96.413	Cebus_capucinus
ENSLOCG00000004675	msi2b	97	79.787	ENSCATG00000040879	MSI2	91	96.413	Cercocebus_atys
ENSLOCG00000004675	msi2b	100	84.553	ENSCLAG00000014325	MSI2	100	82.429	Chinchilla_lanigera
ENSLOCG00000004675	msi2b	100	84.553	ENSCSAG00000005633	MSI2	100	79.587	Chlorocebus_sabaeus
ENSLOCG00000004675	msi2b	64	92.157	ENSCHOG00000008660	MSI2	83	92.157	Choloepus_hoffmanni
ENSLOCG00000004675	msi2b	95	88.696	ENSCPBG00000009942	MSI2	96	88.696	Chrysemys_picta_bellii
ENSLOCG00000004675	msi2b	71	42.529	ENSCING00000018579	-	60	67.883	Ciona_intestinalis
ENSLOCG00000004675	msi2b	85	55.263	ENSCSAVG00000010397	-	67	68.900	Ciona_savignyi
ENSLOCG00000004675	msi2b	95	82.466	ENSCANG00000036414	MSI2	91	96.413	Colobus_angolensis_palliatus
ENSLOCG00000004675	msi2b	100	83.740	ENSCGRG00001013330	Msi2	100	79.124	Cricetulus_griseus_chok1gshd
ENSLOCG00000004675	msi2b	95	82.289	ENSCGRG00000003141	Msi2	100	82.289	Cricetulus_griseus_crigri
ENSLOCG00000004675	msi2b	100	84.553	ENSCSEG00000013549	msi2a	100	76.630	Cynoglossus_semilaevis
ENSLOCG00000004675	msi2b	100	81.301	ENSCSEG00000003266	-	100	65.116	Cynoglossus_semilaevis
ENSLOCG00000004675	msi2b	62	86.154	ENSCSEG00000013557	msi2a	79	86.154	Cynoglossus_semilaevis
ENSLOCG00000004675	msi2b	100	94.330	ENSCVAG00000017075	msi2a	100	97.119	Cyprinodon_variegatus
ENSLOCG00000004675	msi2b	100	92.157	ENSDARG00000032614	msi2b	100	100.000	Danio_rerio
ENSLOCG00000004675	msi2b	100	90.464	ENSDARG00000033901	msi2a	100	90.464	Danio_rerio
ENSLOCG00000004675	msi2b	95	78.386	ENSDNOG00000014501	MSI2	100	78.386	Dasypus_novemcinctus
ENSLOCG00000004675	msi2b	81	54.688	ENSDORG00000005394	Msi2	84	63.281	Dipodomys_ordii
ENSLOCG00000004675	msi2b	82	85.149	ENSDORG00000028440	-	100	98.230	Dipodomys_ordii
ENSLOCG00000004675	msi2b	91	66.071	FBgn0260943	Rbp6	88	66.667	Drosophila_melanogaster
ENSLOCG00000004675	msi2b	57	74.342	ENSETEG00000012450	-	64	74.342	Echinops_telfairi
ENSLOCG00000004675	msi2b	83	76.404	ENSEBUG00000006732	msi2a	87	58.640	Eptatretus_burgeri
ENSLOCG00000004675	msi2b	95	78.689	ENSEASG00005002965	MSI2	97	81.551	Equus_asinus_asinus
ENSLOCG00000004675	msi2b	100	84.553	ENSECAG00000011435	MSI2	100	80.506	Equus_caballus
ENSLOCG00000004675	msi2b	70	81.188	ENSEEUG00000007810	MSI2	100	62.500	Erinaceus_europaeus
ENSLOCG00000004675	msi2b	97	95.213	ENSELUG00000011747	msi2a	96	95.109	Esox_lucius
ENSLOCG00000004675	msi2b	100	94.430	ENSELUG00000001361	msi2b	100	94.430	Esox_lucius
ENSLOCG00000004675	msi2b	99	68.852	ENSFCAG00000033787	-	82	76.923	Felis_catus
ENSLOCG00000004675	msi2b	100	84.553	ENSFCAG00000041686	MSI2	91	96.413	Felis_catus
ENSLOCG00000004675	msi2b	95	82.514	ENSFDAG00000016118	MSI2	100	82.514	Fukomys_damarensis
ENSLOCG00000004675	msi2b	100	88.206	ENSFHEG00000000084	msi2a	96	96.711	Fundulus_heteroclitus
ENSLOCG00000004675	msi2b	85	96.154	ENSGMOG00000007596	-	100	96.154	Gadus_morhua
ENSLOCG00000004675	msi2b	100	83.740	ENSGALG00000005567	MSI2	100	82.429	Gallus_gallus
ENSLOCG00000004675	msi2b	100	86.992	ENSGAFG00000006974	msi2a	90	97.351	Gambusia_affinis
ENSLOCG00000004675	msi2b	100	86.275	ENSGAGG00000016542	MSI2	100	86.308	Gopherus_agassizii
ENSLOCG00000004675	msi2b	95	82.466	ENSGGOG00000013182	MSI2	91	96.413	Gorilla_gorilla
ENSLOCG00000004675	msi2b	100	88.206	ENSHBUG00000020800	msi2a	100	96.708	Haplochromis_burtoni
ENSLOCG00000004675	msi2b	88	94.231	ENSHGLG00000012444	MSI2	100	74.419	Heterocephalus_glaber_female
ENSLOCG00000004675	msi2b	82	85.149	ENSHGLG00100004028	-	87	98.246	Heterocephalus_glaber_male
ENSLOCG00000004675	msi2b	79	75.000	ENSHGLG00100003744	MSI2	100	75.000	Heterocephalus_glaber_male
ENSLOCG00000004675	msi2b	100	87.224	ENSHCOG00000000266	msi2a	100	88.452	Hippocampus_comes
ENSLOCG00000004675	msi2b	97	72.705	ENSHCOG00000017241	-	98	71.891	Hippocampus_comes
ENSLOCG00000004675	msi2b	100	88.670	ENSIPUG00000021097	msi2a	100	97.942	Ictalurus_punctatus
ENSLOCG00000004675	msi2b	100	95.361	ENSIPUG00000003732	msi2b	100	95.361	Ictalurus_punctatus
ENSLOCG00000004675	msi2b	95	73.900	ENSSTOG00000007884	MSI2	99	73.900	Ictidomys_tridecemlineatus
ENSLOCG00000004675	msi2b	79	67.339	ENSJJAG00000006292	-	100	67.339	Jaculus_jaculus
ENSLOCG00000004675	msi2b	82	85.149	ENSJJAG00000009467	-	100	98.230	Jaculus_jaculus
ENSLOCG00000004675	msi2b	100	93.557	ENSKMAG00000009494	msi2a	100	93.557	Kryptolebias_marmoratus
ENSLOCG00000004675	msi2b	100	88.698	ENSLBEG00000007061	msi2a	100	90.172	Labrus_bergylta
ENSLOCG00000004675	msi2b	95	79.240	ENSLBEG00000026223	-	100	79.240	Labrus_bergylta
ENSLOCG00000004675	msi2b	74	95.604	ENSLACG00000016798	MSI2	98	95.604	Latimeria_chalumnae
ENSLOCG00000004675	msi2b	95	82.466	ENSMFAG00000003775	MSI2	91	96.413	Macaca_fascicularis
ENSLOCG00000004675	msi2b	95	82.466	ENSMMUG00000002069	MSI2	91	96.413	Macaca_mulatta
ENSLOCG00000004675	msi2b	100	84.553	ENSMNEG00000045275	MSI2	91	96.413	Macaca_nemestrina
ENSLOCG00000004675	msi2b	95	82.466	ENSMLEG00000033888	MSI2	91	96.413	Mandrillus_leucophaeus
ENSLOCG00000004675	msi2b	100	88.480	ENSMAMG00000010503	msi2a	100	97.119	Mastacembelus_armatus
ENSLOCG00000004675	msi2b	100	86.179	ENSMAMG00000002488	-	99	96.689	Mastacembelus_armatus
ENSLOCG00000004675	msi2b	100	88.206	ENSMZEG00005007676	msi2a	95	96.708	Maylandia_zebra
ENSLOCG00000004675	msi2b	100	83.740	ENSMAUG00000003862	Msi2	100	81.959	Mesocricetus_auratus
ENSLOCG00000004675	msi2b	100	84.553	ENSMICG00000013598	-	91	96.413	Microcebus_murinus
ENSLOCG00000004675	msi2b	100	75.610	ENSMICG00000032913	-	100	64.083	Microcebus_murinus
ENSLOCG00000004675	msi2b	100	83.740	ENSMOCG00000005820	Msi2	100	82.171	Microtus_ochrogaster
ENSLOCG00000004675	msi2b	96	79.088	ENSMMOG00000008348	msi2a	84	96.380	Mola_mola
ENSLOCG00000004675	msi2b	79	74.597	ENSMODG00000014790	MSI2	100	74.597	Monodelphis_domestica
ENSLOCG00000004675	msi2b	100	96.732	ENSMALG00000000071	msi2a	100	97.119	Monopterus_albus
ENSLOCG00000004675	msi2b	100	83.740	MGP_CAROLIEiJ_G0016948	Msi2	100	98.230	Mus_caroli
ENSLOCG00000004675	msi2b	100	83.740	ENSMUSG00000069769	Msi2	100	98.230	Mus_musculus
ENSLOCG00000004675	msi2b	100	83.740	MGP_PahariEiJ_G0018079	Msi2	100	98.230	Mus_pahari
ENSLOCG00000004675	msi2b	100	83.740	MGP_SPRETEiJ_G0017795	Msi2	100	98.230	Mus_spretus
ENSLOCG00000004675	msi2b	95	79.508	ENSMPUG00000015377	MSI2	97	79.508	Mustela_putorius_furo
ENSLOCG00000004675	msi2b	95	79.235	ENSMLUG00000007865	MSI2	97	79.235	Myotis_lucifugus
ENSLOCG00000004675	msi2b	100	83.740	ENSNGAG00000017807	Msi2	100	82.171	Nannospalax_galili
ENSLOCG00000004675	msi2b	100	94.072	ENSNBRG00000014596	msi2a	100	94.072	Neolamprologus_brichardi
ENSLOCG00000004675	msi2b	95	81.818	ENSNLEG00000008059	MSI2	95	96.172	Nomascus_leucogenys
ENSLOCG00000004675	msi2b	57	86.184	ENSOPRG00000000872	-	64	86.184	Ochotona_princeps
ENSLOCG00000004675	msi2b	100	84.553	ENSODEG00000011974	MSI2	100	82.429	Octodon_degus
ENSLOCG00000004675	msi2b	100	86.992	ENSONIG00000001972	msi2a	84	97.351	Oreochromis_niloticus
ENSLOCG00000004675	msi2b	97	78.992	ENSOANG00000005667	MSI2	99	77.804	Ornithorhynchus_anatinus
ENSLOCG00000004675	msi2b	95	79.508	ENSOCUG00000010440	MSI2	97	79.508	Oryctolagus_cuniculus
ENSLOCG00000004675	msi2b	100	94.330	ENSORLG00000009671	msi2a	100	94.330	Oryzias_latipes
ENSLOCG00000004675	msi2b	100	88.452	ENSORLG00020021556	msi2a	100	97.119	Oryzias_latipes_hni
ENSLOCG00000004675	msi2b	100	94.330	ENSORLG00015004592	msi2a	100	94.330	Oryzias_latipes_hsok
ENSLOCG00000004675	msi2b	100	94.330	ENSOMEG00000000146	msi2a	100	97.119	Oryzias_melastigma
ENSLOCG00000004675	msi2b	95	75.683	ENSOGAG00000005621	MSI2	99	75.410	Otolemur_garnettii
ENSLOCG00000004675	msi2b	95	82.466	ENSPPAG00000037697	MSI2	91	96.413	Pan_paniscus
ENSLOCG00000004675	msi2b	95	79.508	ENSPPRG00000001848	MSI2	91	96.413	Panthera_pardus
ENSLOCG00000004675	msi2b	95	81.818	ENSPTIG00000021678	MSI2	83	96.172	Panthera_tigris_altaica
ENSLOCG00000004675	msi2b	93	60.000	ENSPTIG00000021873	-	90	77.637	Panthera_tigris_altaica
ENSLOCG00000004675	msi2b	95	82.466	ENSPTRG00000009437	MSI2	91	96.413	Pan_troglodytes
ENSLOCG00000004675	msi2b	100	84.553	ENSPANG00000022319	MSI2	91	96.413	Papio_anubis
ENSLOCG00000004675	msi2b	100	84.553	ENSPKIG00000007038	-	96	94.650	Paramormyrops_kingsleyae
ENSLOCG00000004675	msi2b	74	98.901	ENSPKIG00000017107	-	81	98.901	Paramormyrops_kingsleyae
ENSLOCG00000004675	msi2b	100	90.148	ENSPSIG00000008618	MSI2	100	90.148	Pelodiscus_sinensis
ENSLOCG00000004675	msi2b	100	75.452	ENSPMGG00000005888	msi2a	100	75.452	Periophthalmus_magnuspinnatus
ENSLOCG00000004675	msi2b	82	85.149	ENSPEMG00000021793	-	100	98.230	Peromyscus_maniculatus_bairdii
ENSLOCG00000004675	msi2b	100	87.805	ENSPCIG00000006063	MSI2	100	81.266	Phascolarctos_cinereus
ENSLOCG00000004675	msi2b	85	97.115	ENSPFOG00000019337	MSI2	92	96.190	Poecilia_formosa
ENSLOCG00000004675	msi2b	100	86.992	ENSPLAG00000000436	msi2a	76	94.366	Poecilia_latipinna
ENSLOCG00000004675	msi2b	100	74.797	ENSPMEG00000013247	msi2a	80	83.217	Poecilia_mexicana
ENSLOCG00000004675	msi2b	100	88.452	ENSPREG00000000881	msi2a	100	89.926	Poecilia_reticulata
ENSLOCG00000004675	msi2b	95	72.727	ENSPPYG00000008244	-	100	72.727	Pongo_abelii
ENSLOCG00000004675	msi2b	77	52.189	ENSPCAG00000010552	MSI2	100	50.842	Procavia_capensis
ENSLOCG00000004675	msi2b	83	85.294	ENSPCOG00000019195	-	93	98.462	Propithecus_coquereli
ENSLOCG00000004675	msi2b	68	98.901	ENSPVAG00000017053	MSI2	100	72.159	Pteropus_vampyrus
ENSLOCG00000004675	msi2b	100	88.206	ENSPNYG00000018393	msi2a	100	96.708	Pundamilia_nyererei
ENSLOCG00000004675	msi2b	100	96.658	ENSPNAG00000014957	msi2a	100	96.658	Pygocentrus_nattereri
ENSLOCG00000004675	msi2b	100	96.144	ENSPNAG00000000844	msi2b	100	96.144	Pygocentrus_nattereri
ENSLOCG00000004675	msi2b	95	77.745	ENSRNOG00000025338	Msi2	100	77.745	Rattus_norvegicus
ENSLOCG00000004675	msi2b	74	75.824	ENSRBIG00000032064	-	84	75.824	Rhinopithecus_bieti
ENSLOCG00000004675	msi2b	83	85.294	ENSRROG00000034421	-	92	98.246	Rhinopithecus_roxellana
ENSLOCG00000004675	msi2b	95	82.466	ENSSBOG00000026425	MSI2	91	96.413	Saimiri_boliviensis_boliviensis
ENSLOCG00000004675	msi2b	95	82.466	ENSSHAG00000008672	MSI2	100	82.466	Sarcophilus_harrisii
ENSLOCG00000004675	msi2b	100	73.529	ENSSFOG00015012168	msi2b	100	73.529	Scleropages_formosus
ENSLOCG00000004675	msi2b	95	76.230	ENSSFOG00015021687	-	97	76.503	Scleropages_formosus
ENSLOCG00000004675	msi2b	100	88.452	ENSSMAG00000018484	msi2a	100	97.119	Scophthalmus_maximus
ENSLOCG00000004675	msi2b	100	86.992	ENSSDUG00000021968	-	99	96.026	Seriola_dumerili
ENSLOCG00000004675	msi2b	100	88.698	ENSSDUG00000014507	msi2a	100	97.119	Seriola_dumerili
ENSLOCG00000004675	msi2b	74	82.418	ENSSLDG00000021332	-	68	82.418	Seriola_lalandi_dorsalis
ENSLOCG00000004675	msi2b	100	88.698	ENSSLDG00000017172	msi2a	95	97.119	Seriola_lalandi_dorsalis
ENSLOCG00000004675	msi2b	100	86.992	ENSSPUG00000000913	-	94	95.570	Sphenodon_punctatus
ENSLOCG00000004675	msi2b	100	88.698	ENSSPAG00000017793	msi2a	95	97.119	Stegastes_partitus
ENSLOCG00000004675	msi2b	100	84.553	ENSSSCG00000038505	MSI2	96	95.885	Sus_scrofa
ENSLOCG00000004675	msi2b	79	75.806	ENSTGUG00000008452	MSI2	100	75.806	Taeniopygia_guttata
ENSLOCG00000004675	msi2b	100	86.992	ENSTRUG00000021248	msi2a	95	89.313	Takifugu_rubripes
ENSLOCG00000004675	msi2b	100	65.854	ENSTBEG00000001241	MSI2	73	79.339	Tupaia_belangeri
ENSLOCG00000004675	msi2b	74	97.368	ENSTTRG00000002189	MSI2	91	97.368	Tursiops_truncatus
ENSLOCG00000004675	msi2b	90	89.855	ENSUAMG00000000700	MSI2	96	97.297	Ursus_americanus
ENSLOCG00000004675	msi2b	80	87.500	ENSUMAG00000000505	MSI2	95	96.891	Ursus_maritimus
ENSLOCG00000004675	msi2b	83	82.955	ENSVPAG00000006837	-	62	83.516	Vicugna_pacos
ENSLOCG00000004675	msi2b	100	87.879	ENSVVUG00000011783	MSI2	97	94.470	Vulpes_vulpes
ENSLOCG00000004675	msi2b	100	92.010	ENSXCOG00000006113	msi2a	100	92.010	Xiphophorus_couchianus
ENSLOCG00000004675	msi2b	100	88.206	ENSXMAG00000000608	msi2a	100	97.119	Xiphophorus_maculatus