EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLOCG00000004694 (Gene tree)
Gene ID
102693258
Gene Symbol
pabpn1l
Alias
-
Full Name
poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Plus strand
Length
5124 bases
Position
chrLG23:8614517-8619640
Accession
102693258
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000005644RRM_1PF00076.227.5e-1711
ENSLOCP00000005627RRM_1PF00076.228e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000005635-1617-ENSLOCP00000005627232 (aa)-W5MB68
ENSLOCT00000005652-1557XM_006641349ENSLOCP00000005644212 (aa)XP_015223498W5MB85
Gene Model
Click here to download ENSLOCG00000004694's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004694's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLOCG00000004694pabpn1l9364.851ENSLOCG00000000796pabpn16865.969
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000004694pabpn1l8766.842ENSG00000258643BCL2L2-PABPN15766.842Homo_sapiens
ENSLOCG00000004694pabpn1l9565.700ENSG00000100836PABPN110065.363Homo_sapiens
ENSLOCG00000004694pabpn1l9965.888ENSAPOG00000016425pabpn19065.888Acanthochromis_polyacanthus
ENSLOCG00000004694pabpn1l8766.842ENSAMEG00000007048BCL2L2-PABPN110066.842Ailuropoda_melanoleuca
ENSLOCG00000004694pabpn1l9265.347ENSACIG00000021744pabpn110066.102Amphilophus_citrinellus
ENSLOCG00000004694pabpn1l9965.888ENSAOCG00000015805pabpn19065.888Amphiprion_ocellaris
ENSLOCG00000004694pabpn1l9965.888ENSAPEG00000009623pabpn19065.888Amphiprion_percula
ENSLOCG00000004694pabpn1l9966.355ENSATEG00000020531pabpn19066.355Anabas_testudineus
ENSLOCG00000004694pabpn1l8766.492ENSACAG00000006185-6764.921Anolis_carolinensis
ENSLOCG00000004694pabpn1l9166.667ENSANAG00000024513-7764.352Aotus_nancymaae
ENSLOCG00000004694pabpn1l9265.025ENSACLG00000016374pabpn16665.979Astatotilapia_calliptera
ENSLOCG00000004694pabpn1l9966.512ENSAMXG00000000452pabpn110066.292Astyanax_mexicanus
ENSLOCG00000004694pabpn1l9465.534ENSBTAG00000006884PABPN16765.534Bos_taurus
ENSLOCG00000004694pabpn1l8866.492ENSBTAG00000053753-7166.492Bos_taurus
ENSLOCG00000004694pabpn1l9061.658ENSBTAG00000050594-7262.376Bos_taurus
ENSLOCG00000004694pabpn1l6751.370WBGene00003904pabp-28649.718Caenorhabditis_elegans
ENSLOCG00000004694pabpn1l7663.095ENSCJAG00000004407-8964.246Callithrix_jacchus
ENSLOCG00000004694pabpn1l9565.700ENSCJAG00000007960-7765.238Callithrix_jacchus
ENSLOCG00000004694pabpn1l9565.700ENSCAFG00000011482PABPN16865.238Canis_familiaris
ENSLOCG00000004694pabpn1l9565.700ENSCAFG00020007298-6865.238Canis_lupus_dingo
ENSLOCG00000004694pabpn1l9565.700ENSCAFG00020006651-6865.238Canis_lupus_dingo
ENSLOCG00000004694pabpn1l9565.700ENSCHIG00000012184PABPN16865.238Capra_hircus
ENSLOCG00000004694pabpn1l8766.842ENSTSYG00000033996BCL2L2-PABPN110065.363Carlito_syrichta
ENSLOCG00000004694pabpn1l6367.153ENSCAPG00000009461-9367.176Cavia_aperea
ENSLOCG00000004694pabpn1l9564.734ENSCPOG00000025574PABPN16864.286Cavia_porcellus
ENSLOCG00000004694pabpn1l9565.700ENSCCAG00000033954BCL2L2-PABPN17765.238Cebus_capucinus
ENSLOCG00000004694pabpn1l9565.700ENSCATG00000038536BCL2L2-PABPN17765.238Cercocebus_atys
ENSLOCG00000004694pabpn1l9047.577ENSCLAG00000012423PABPN15567.347Chinchilla_lanigera
ENSLOCG00000004694pabpn1l9564.251ENSCSAG00000016036PABPN16863.810Chlorocebus_sabaeus
ENSLOCG00000004694pabpn1l9558.937ENSCHOG00000004798BCL2L2-PABPN18858.937Choloepus_hoffmanni
ENSLOCG00000004694pabpn1l7665.476ENSCPBG00000026060-10066.480Chrysemys_picta_bellii
ENSLOCG00000004694pabpn1l8860.638ENSCING00000012468-8059.896Ciona_intestinalis
ENSLOCG00000004694pabpn1l8256.180ENSCSAVG00000002001-10055.556Ciona_savignyi
ENSLOCG00000004694pabpn1l8766.842ENSCANG00000009750BCL2L2-PABPN110065.363Colobus_angolensis_palliatus
ENSLOCG00000004694pabpn1l8959.162ENSCANG00000030980-7556.522Colobus_angolensis_palliatus
ENSLOCG00000004694pabpn1l9565.217ENSCGRG00001019696Pabpn110065.363Cricetulus_griseus_chok1gshd
ENSLOCG00000004694pabpn1l7664.286ENSCGRG00000011102Pabpn110065.363Cricetulus_griseus_crigri
ENSLOCG00000004694pabpn1l9966.197ENSCSEG00000008774pabpn19066.197Cynoglossus_semilaevis
ENSLOCG00000004694pabpn1l9962.617ENSCVAG00000003152pabpn19065.421Cyprinodon_variegatus
ENSLOCG00000004694pabpn1l8758.378ENSDARG00000087996pabpn1l8566.906Danio_rerio
ENSLOCG00000004694pabpn1l9966.822ENSDARG00000045373pabpn19066.822Danio_rerio
ENSLOCG00000004694pabpn1l9565.700ENSDNOG00000023682PABPN16865.238Dasypus_novemcinctus
ENSLOCG00000004694pabpn1l6162.879ENSDORG00000023928-9262.879Dipodomys_ordii
ENSLOCG00000004694pabpn1l9564.251ENSDORG00000028966-6863.810Dipodomys_ordii
ENSLOCG00000004694pabpn1l9950.926FBgn0005648Pabp28752.821Drosophila_melanogaster
ENSLOCG00000004694pabpn1l8965.803ENSEBUG00000002322pabpn18365.803Eptatretus_burgeri
ENSLOCG00000004694pabpn1l9565.700ENSEASG00005011716PABPN16865.238Equus_asinus_asinus
ENSLOCG00000004694pabpn1l9464.878ENSECAG00000011652PABPN16465.445Equus_caballus
ENSLOCG00000004694pabpn1l9562.136ENSEEUG00000012973-7161.722Erinaceus_europaeus
ENSLOCG00000004694pabpn1l9966.512ENSELUG00000022654pabpn18966.512Esox_lucius
ENSLOCG00000004694pabpn1l9565.700ENSFCAG00000031922PABPN16865.238Felis_catus
ENSLOCG00000004694pabpn1l7663.095ENSFDAG00000018381BCL2L2-PABPN110064.246Fukomys_damarensis
ENSLOCG00000004694pabpn1l9965.094ENSFHEG00000007215pabpn19065.094Fundulus_heteroclitus
ENSLOCG00000004694pabpn1l9363.861ENSGMOG00000003922pabpn16667.708Gadus_morhua
ENSLOCG00000004694pabpn1l8964.615ENSGALG00000052930-6163.761Gallus_gallus
ENSLOCG00000004694pabpn1l9965.581ENSGAFG00000017099pabpn19066.512Gambusia_affinis
ENSLOCG00000004694pabpn1l9963.755ENSGACG00000002167pabpn19163.158Gasterosteus_aculeatus
ENSLOCG00000004694pabpn1l8960.209ENSGGOG00000039675-8156.338Gorilla_gorilla
ENSLOCG00000004694pabpn1l9655.288ENSGGOG00000025919-9955.307Gorilla_gorilla
ENSLOCG00000004694pabpn1l9565.700ENSGGOG00000022683-7765.238Gorilla_gorilla
ENSLOCG00000004694pabpn1l9966.355ENSHBUG00000019523pabpn19066.355Haplochromis_burtoni
ENSLOCG00000004694pabpn1l9657.561ENSHGLG00000018588-7056.585Heterocephalus_glaber_female
ENSLOCG00000004694pabpn1l9564.734ENSHGLG00000002927-9270.748Heterocephalus_glaber_female
ENSLOCG00000004694pabpn1l7652.121ENSHGLG00000009842-10053.714Heterocephalus_glaber_female
ENSLOCG00000004694pabpn1l8266.111ENSHGLG00100006673-10064.804Heterocephalus_glaber_male
ENSLOCG00000004694pabpn1l9657.561ENSHGLG00100015565-7156.585Heterocephalus_glaber_male
ENSLOCG00000004694pabpn1l7658.788ENSHGLG00100018935-10060.227Heterocephalus_glaber_male
ENSLOCG00000004694pabpn1l9962.911ENSHCOG00000004655pabpn19062.911Hippocampus_comes
ENSLOCG00000004694pabpn1l10062.791ENSIPUG00000000180-9462.791Ictalurus_punctatus
ENSLOCG00000004694pabpn1l9966.822ENSIPUG00000008085PABPN19066.822Ictalurus_punctatus
ENSLOCG00000004694pabpn1l7664.286ENSSTOG00000029847BCL2L2-PABPN110065.363Ictidomys_tridecemlineatus
ENSLOCG00000004694pabpn1l7664.286ENSJJAG00000023507Gm2052110065.363Jaculus_jaculus
ENSLOCG00000004694pabpn1l9966.047ENSKMAG00000018748pabpn19064.651Kryptolebias_marmoratus
ENSLOCG00000004694pabpn1l9966.355ENSLBEG00000027266pabpn19066.355Labrus_bergylta
ENSLOCG00000004694pabpn1l8265.556ENSLACG00000000646pabpn17565.318Latimeria_chalumnae
ENSLOCG00000004694pabpn1l6768.027ENSLAFG00000031227-9967.333Loxodonta_africana
ENSLOCG00000004694pabpn1l6563.121ENSMFAG00000031355-9962.676Macaca_fascicularis
ENSLOCG00000004694pabpn1l8766.842ENSMFAG00000032183BCL2L2-PABPN110065.363Macaca_fascicularis
ENSLOCG00000004694pabpn1l9456.585ENSMMUG00000048382-6856.585Macaca_mulatta
ENSLOCG00000004694pabpn1l8766.842ENSMMUG00000014747BCL2L2-PABPN110068.027Macaca_mulatta
ENSLOCG00000004694pabpn1l7557.669ENSMNEG00000035750-9962.676Macaca_nemestrina
ENSLOCG00000004694pabpn1l9565.700ENSMNEG00000045065BCL2L2-PABPN17765.238Macaca_nemestrina
ENSLOCG00000004694pabpn1l8766.842ENSMLEG00000043862BCL2L2-PABPN110065.363Mandrillus_leucophaeus
ENSLOCG00000004694pabpn1l7556.875ENSMLEG00000034623-9962.319Mandrillus_leucophaeus
ENSLOCG00000004694pabpn1l9366.337ENSMAMG00000007979pabpn16667.539Mastacembelus_armatus
ENSLOCG00000004694pabpn1l9366.337ENSMZEG00005011904pabpn16567.539Maylandia_zebra
ENSLOCG00000004694pabpn1l9565.217ENSMAUG00000007383Gm205217064.762Mesocricetus_auratus
ENSLOCG00000004694pabpn1l9565.700ENSMICG00000010002BCL2L2-PABPN17765.238Microcebus_murinus
ENSLOCG00000004694pabpn1l9565.217ENSMOCG00000018557Gm205219071.429Microtus_ochrogaster
ENSLOCG00000004694pabpn1l9966.355ENSMMOG00000005405pabpn19066.355Mola_mola
ENSLOCG00000004694pabpn1l9364.532ENSMODG00000004535-6764.734Monodelphis_domestica
ENSLOCG00000004694pabpn1l9366.337ENSMALG00000019612pabpn16567.539Monopterus_albus
ENSLOCG00000004694pabpn1l8765.608MGP_CAROLIEiJ_G0019276Gm205215765.608Mus_caroli
ENSLOCG00000004694pabpn1l9564.078MGP_CAROLIEiJ_G0019277Pabpn110064.045Mus_caroli
ENSLOCG00000004694pabpn1l8766.138ENSMUSG00000092232Gm205215766.138Mus_musculus
ENSLOCG00000004694pabpn1l9564.563ENSMUSG00000022194Pabpn110064.607Mus_musculus
ENSLOCG00000004694pabpn1l8766.138MGP_PahariEiJ_G0030294Gm205215766.138Mus_pahari
ENSLOCG00000004694pabpn1l9564.563MGP_PahariEiJ_G0030295Pabpn110076.190Mus_pahari
ENSLOCG00000004694pabpn1l8766.138MGP_SPRETEiJ_G0020165Gm205215766.138Mus_spretus
ENSLOCG00000004694pabpn1l9564.563MGP_SPRETEiJ_G0020166Pabpn110064.607Mus_spretus
ENSLOCG00000004694pabpn1l7263.924ENSMPUG00000006775-9565.625Mustela_putorius_furo
ENSLOCG00000004694pabpn1l9562.736ENSMLUG00000012452-6863.942Myotis_lucifugus
ENSLOCG00000004694pabpn1l8765.263ENSMLUG00000003800-10065.263Myotis_lucifugus
ENSLOCG00000004694pabpn1l9164.646ENSMLUG00000028677-7563.768Myotis_lucifugus
ENSLOCG00000004694pabpn1l8766.842ENSNGAG00000019529Gm205215766.842Nannospalax_galili
ENSLOCG00000004694pabpn1l9366.337ENSNBRG00000023955pabpn110066.102Neolamprologus_brichardi
ENSLOCG00000004694pabpn1l9565.700ENSNLEG00000015007-7465.238Nomascus_leucogenys
ENSLOCG00000004694pabpn1l9555.224ENSNLEG00000030598-7758.333Nomascus_leucogenys
ENSLOCG00000004694pabpn1l6652.857ENSNLEG00000035292-9552.113Nomascus_leucogenys
ENSLOCG00000004694pabpn1l9564.734ENSODEG00000002083BCL2L2-PABPN16864.286Octodon_degus
ENSLOCG00000004694pabpn1l8256.742ENSODEG00000011555-9556.742Octodon_degus
ENSLOCG00000004694pabpn1l9562.189ENSODEG00000003739-7061.765Octodon_degus
ENSLOCG00000004694pabpn1l9366.337ENSONIG00000008112pabpn16567.539Oreochromis_niloticus
ENSLOCG00000004694pabpn1l6768.707ENSOANG00000009218-10068.707Ornithorhynchus_anatinus
ENSLOCG00000004694pabpn1l9565.217ENSOCUG00000016174PABPN17664.762Oryctolagus_cuniculus
ENSLOCG00000004694pabpn1l9366.337ENSORLG00000027900pabpn17967.539Oryzias_latipes
ENSLOCG00000004694pabpn1l8867.539ENSORLG00020004681pabpn16467.539Oryzias_latipes_hni
ENSLOCG00000004694pabpn1l9966.355ENSORLG00015000018pabpn19066.355Oryzias_latipes_hsok
ENSLOCG00000004694pabpn1l9863.679ENSOMEG00000016618pabpn16967.539Oryzias_melastigma
ENSLOCG00000004694pabpn1l9565.700ENSOGAG00000008710PABPN16865.238Otolemur_garnettii
ENSLOCG00000004694pabpn1l8766.842ENSOARG00000019336BCL2L2-PABPN15266.842Ovis_aries
ENSLOCG00000004694pabpn1l8766.842ENSPPAG00000028984BCL2L2-PABPN19565.625Pan_paniscus
ENSLOCG00000004694pabpn1l7656.024ENSPPAG00000039421-10057.627Pan_paniscus
ENSLOCG00000004694pabpn1l9565.700ENSPPRG00000010567PABPN16865.238Panthera_pardus
ENSLOCG00000004694pabpn1l7664.286ENSPTIG00000001063BCL2L2-PABPN110065.363Panthera_tigris_altaica
ENSLOCG00000004694pabpn1l9565.700ENSPTRG00000006167BCL2L27765.238Pan_troglodytes
ENSLOCG00000004694pabpn1l8958.115ENSPTRG00000047273-7158.115Pan_troglodytes
ENSLOCG00000004694pabpn1l9565.700ENSPANG00000021100BCL2L2-PABPN17765.238Papio_anubis
ENSLOCG00000004694pabpn1l8958.247ENSPANG00000023326-9963.380Papio_anubis
ENSLOCG00000004694pabpn1l10073.113ENSPKIG00000008340pabpn1l10074.057Paramormyrops_kingsleyae
ENSLOCG00000004694pabpn1l9961.682ENSPKIG00000018052pabpn19066.047Paramormyrops_kingsleyae
ENSLOCG00000004694pabpn1l9366.337ENSPKIG00000008144-6567.539Paramormyrops_kingsleyae
ENSLOCG00000004694pabpn1l5269.369ENSPSIG00000011959-8368.421Pelodiscus_sinensis
ENSLOCG00000004694pabpn1l9366.337ENSPMGG00000022027pabpn16867.539Periophthalmus_magnuspinnatus
ENSLOCG00000004694pabpn1l9565.217ENSPEMG00000008332Gm205218772.727Peromyscus_maniculatus_bairdii
ENSLOCG00000004694pabpn1l7868.072ENSPMAG00000006212pabpn19261.712Petromyzon_marinus
ENSLOCG00000004694pabpn1l9565.534ENSPCIG00000027751-6865.714Phascolarctos_cinereus
ENSLOCG00000004694pabpn1l9962.326ENSPFOG00000010351pabpn18965.581Poecilia_formosa
ENSLOCG00000004694pabpn1l7870.060ENSPLAG00000022696pabpn16667.188Poecilia_latipinna
ENSLOCG00000004694pabpn1l9962.326ENSPMEG00000020856pabpn19065.581Poecilia_mexicana
ENSLOCG00000004694pabpn1l9962.791ENSPREG00000011278pabpn19066.047Poecilia_reticulata
ENSLOCG00000004694pabpn1l9065.482ENSPPYG00000005663PABPN16765.445Pongo_abelii
ENSLOCG00000004694pabpn1l8856.186ENSPCAG00000005902PABPN16555.440Procavia_capensis
ENSLOCG00000004694pabpn1l9565.700ENSPCOG00000028047BCL2L2-PABPN17765.238Propithecus_coquereli
ENSLOCG00000004694pabpn1l9664.762ENSPVAG00000005270PABPN16864.762Pteropus_vampyrus
ENSLOCG00000004694pabpn1l9966.355ENSPNYG00000013182pabpn19066.355Pundamilia_nyererei
ENSLOCG00000004694pabpn1l9176.289ENSPNAG00000021666pabpn1l9475.258Pygocentrus_nattereri
ENSLOCG00000004694pabpn1l9966.822ENSPNAG00000023526pabpn19066.822Pygocentrus_nattereri
ENSLOCG00000004694pabpn1l9565.217ENSRNOG00000042195Pabpn16964.762Rattus_norvegicus
ENSLOCG00000004694pabpn1l9657.971ENSRBIG00000039547-7656.522Rhinopithecus_bieti
ENSLOCG00000004694pabpn1l8266.667ENSRBIG00000040762BCL2L2-PABPN15367.251Rhinopithecus_bieti
ENSLOCG00000004694pabpn1l9558.824ENSRBIG00000042811-8556.716Rhinopithecus_bieti
ENSLOCG00000004694pabpn1l9555.122ENSRROG00000036409-6355.122Rhinopithecus_roxellana
ENSLOCG00000004694pabpn1l9658.454ENSRROG00000040409-7657.005Rhinopithecus_roxellana
ENSLOCG00000004694pabpn1l8266.667ENSRROG00000045535BCL2L2-PABPN110065.363Rhinopithecus_roxellana
ENSLOCG00000004694pabpn1l8762.562ENSSBOG00000026930BCL2L2-PABPN19565.625Saimiri_boliviensis_boliviensis
ENSLOCG00000004694pabpn1l8766.667ENSSHAG00000014841-8767.368Sarcophilus_harrisii
ENSLOCG00000004694pabpn1l9557.005ENSSHAG00000007707-8757.005Sarcophilus_harrisii
ENSLOCG00000004694pabpn1l9966.355ENSSFOG00015014718pabpn19066.355Scleropages_formosus
ENSLOCG00000004694pabpn1l8683.060ENSSFOG00015015833pabpn1l7984.706Scleropages_formosus
ENSLOCG00000004694pabpn1l9966.355ENSSFOG00015012565pabpn19466.355Scleropages_formosus
ENSLOCG00000004694pabpn1l9966.355ENSSMAG00000020157pabpn19066.355Scophthalmus_maximus
ENSLOCG00000004694pabpn1l9366.337ENSSDUG00000020582pabpn16567.539Seriola_dumerili
ENSLOCG00000004694pabpn1l9966.355ENSSLDG00000007118pabpn19066.355Seriola_lalandi_dorsalis
ENSLOCG00000004694pabpn1l7664.881ENSSPUG00000018308-10065.922Sphenodon_punctatus
ENSLOCG00000004694pabpn1l9965.116ENSSPAG00000021658pabpn19065.116Stegastes_partitus
ENSLOCG00000004694pabpn1l8040.936ENSSSCG00000038472-7155.446Sus_scrofa
ENSLOCG00000004694pabpn1l9652.941ENSSSCG00000034805-7852.941Sus_scrofa
ENSLOCG00000004694pabpn1l9565.700ENSSSCG00000002023PABPN16865.238Sus_scrofa
ENSLOCG00000004694pabpn1l9966.822ENSTRUG00000023664pabpn19066.822Takifugu_rubripes
ENSLOCG00000004694pabpn1l9963.721ENSTNIG00000005369pabpn18767.539Tetraodon_nigroviridis
ENSLOCG00000004694pabpn1l9565.700ENSUAMG00000024460PABPN16865.238Ursus_americanus
ENSLOCG00000004694pabpn1l8766.842ENSUMAG00000014288BCL2L2-PABPN15766.842Ursus_maritimus
ENSLOCG00000004694pabpn1l8965.128ENSVVUG00000019912BCL2L2-PABPN17665.128Vulpes_vulpes
ENSLOCG00000004694pabpn1l9063.590ENSXETG00000014597pabpn16865.174Xenopus_tropicalis
ENSLOCG00000004694pabpn1l6764.865ENSXCOG00000005158pabpn19863.095Xiphophorus_couchianus
ENSLOCG00000004694pabpn1l9963.256ENSXMAG00000006196pabpn19066.512Xiphophorus_maculatus

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