EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004711 (Gene tree)
Gene ID: 102682850
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 5841 bases
Position: chrLG10:6520510-6526350
Accession: 102682850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005645	zf-C2H2	PF00096.26	4.1e-28	1	5
ENSLOCP00000005645	zf-C2H2	PF00096.26	4.1e-28	2	5
ENSLOCP00000005645	zf-C2H2	PF00096.26	4.1e-28	3	5
ENSLOCP00000005645	zf-C2H2	PF00096.26	4.1e-28	4	5
ENSLOCP00000005645	zf-C2H2	PF00096.26	4.1e-28	5	5
ENSLOCP00000005645	zf-met	PF12874.7	1.3e-08	1	2
ENSLOCP00000005645	zf-met	PF12874.7	1.3e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005653	-	1191	XM_006634693	ENSLOCP00000005645	396 (aa)	XP_015210662	W5MB86

Gene Model

Click here to download ENSLOCG00000004711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004711	gfi1ab	65	35.294	ENSLOCG00000004443	snai1a	90	35.294
ENSLOCG00000004711	gfi1ab	52	47.170	ENSLOCG00000003926	znf236	59	47.170
ENSLOCG00000004711	gfi1ab	56	31.304	ENSLOCG00000007573	scrt1b	72	31.304
ENSLOCG00000004711	gfi1ab	54	43.902	ENSLOCG00000000714	-	88	43.902
ENSLOCG00000004711	gfi1ab	54	41.718	ENSLOCG00000016466	-	98	41.718

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004711	gfi1ab	100	66.513	ENSG00000162676	GFI1	100	66.513	Homo_sapiens
ENSLOCG00000004711	gfi1ab	100	71.571	ENSAPOG00000015189	gfi1ab	100	71.322	Acanthochromis_polyacanthus
ENSLOCG00000004711	gfi1ab	100	70.250	ENSACIG00000016354	gfi1ab	100	70.500	Amphilophus_citrinellus
ENSLOCG00000004711	gfi1ab	100	47.541	ENSAOCG00000008339	gfi1ab	100	49.635	Amphiprion_ocellaris
ENSLOCG00000004711	gfi1ab	100	71.820	ENSAPEG00000023870	gfi1ab	100	71.571	Amphiprion_percula
ENSLOCG00000004711	gfi1ab	100	68.090	ENSATEG00000009167	gfi1ab	89	67.839	Anabas_testudineus
ENSLOCG00000004711	gfi1ab	85	72.701	ENSAPLG00000015700	GFI1	99	72.701	Anas_platyrhynchos
ENSLOCG00000004711	gfi1ab	100	71.602	ENSACAG00000004498	GFI1	100	72.087	Anolis_carolinensis
ENSLOCG00000004711	gfi1ab	100	67.206	ENSANAG00000019656	GFI1	100	66.744	Aotus_nancymaae
ENSLOCG00000004711	gfi1ab	100	72.319	ENSACLG00000026458	gfi1ab	93	72.070	Astatotilapia_calliptera
ENSLOCG00000004711	gfi1ab	100	66.501	ENSAMXG00000039600	gfi1ab	100	66.253	Astyanax_mexicanus
ENSLOCG00000004711	gfi1ab	100	55.164	ENSAMXG00000006669	GFI1	99	65.854	Astyanax_mexicanus
ENSLOCG00000004711	gfi1ab	100	66.207	ENSBTAG00000016723	GFI1	100	67.832	Bos_taurus
ENSLOCG00000004711	gfi1ab	100	65.589	ENSCJAG00000017609	GFI1	100	65.589	Callithrix_jacchus
ENSLOCG00000004711	gfi1ab	100	66.513	ENSCAFG00000020155	GFI1	100	67.206	Canis_familiaris
ENSLOCG00000004711	gfi1ab	100	66.513	ENSCAFG00020013371	GFI1	88	67.206	Canis_lupus_dingo
ENSLOCG00000004711	gfi1ab	100	66.207	ENSCHIG00000016135	GFI1	100	67.832	Capra_hircus
ENSLOCG00000004711	gfi1ab	100	66.125	ENSCPOG00000011727	GFI1	100	66.357	Cavia_porcellus
ENSLOCG00000004711	gfi1ab	100	65.820	ENSCCAG00000036072	GFI1	100	66.051	Cebus_capucinus
ENSLOCG00000004711	gfi1ab	100	66.513	ENSCATG00000037873	GFI1	100	66.513	Cercocebus_atys
ENSLOCG00000004711	gfi1ab	100	70.762	ENSCLAG00000005915	GFI1	100	65.158	Chinchilla_lanigera
ENSLOCG00000004711	gfi1ab	98	61.600	ENSCSAG00000001469	GFI1	100	61.600	Chlorocebus_sabaeus
ENSLOCG00000004711	gfi1ab	100	66.513	ENSCANG00000034077	GFI1	100	66.513	Colobus_angolensis_palliatus
ENSLOCG00000004711	gfi1ab	100	65.349	ENSCGRG00001015432	Gfi1	100	66.047	Cricetulus_griseus_chok1gshd
ENSLOCG00000004711	gfi1ab	100	64.764	ENSCSEG00000017729	GFI1	100	64.268	Cynoglossus_semilaevis
ENSLOCG00000004711	gfi1ab	100	60.000	ENSCVAG00000004930	GFI1	100	61.429	Cyprinodon_variegatus
ENSLOCG00000004711	gfi1ab	100	70.324	ENSCVAG00000011828	gfi1ab	100	70.075	Cyprinodon_variegatus
ENSLOCG00000004711	gfi1ab	100	75.628	ENSDARG00000044457	gfi1ab	100	75.628	Danio_rerio
ENSLOCG00000004711	gfi1ab	100	65.227	ENSDNOG00000000782	GFI1	97	66.820	Dasypus_novemcinctus
ENSLOCG00000004711	gfi1ab	100	67.916	ENSEASG00005015509	GFI1	86	68.618	Equus_asinus_asinus
ENSLOCG00000004711	gfi1ab	91	59.848	ENSECAG00000006647	GFI1	92	60.606	Equus_caballus
ENSLOCG00000004711	gfi1ab	100	64.554	ENSEEUG00000000198	GFI1	100	65.493	Erinaceus_europaeus
ENSLOCG00000004711	gfi1ab	100	66.584	ENSELUG00000019033	GFI1	100	66.584	Esox_lucius
ENSLOCG00000004711	gfi1ab	100	75.434	ENSELUG00000003015	gfi1ab	99	75.186	Esox_lucius
ENSLOCG00000004711	gfi1ab	100	66.282	ENSFCAG00000005914	GFI1	100	66.744	Felis_catus
ENSLOCG00000004711	gfi1ab	100	61.005	ENSFHEG00000000341	GFI1	100	63.882	Fundulus_heteroclitus
ENSLOCG00000004711	gfi1ab	100	70.647	ENSFHEG00000010997	gfi1ab	100	70.398	Fundulus_heteroclitus
ENSLOCG00000004711	gfi1ab	100	69.925	ENSGMOG00000007737	gfi1ab	100	69.925	Gadus_morhua
ENSLOCG00000004711	gfi1ab	100	71.990	ENSGALG00000043650	GFI1	100	71.990	Gallus_gallus
ENSLOCG00000004711	gfi1ab	100	60.192	ENSGAFG00000018063	GFI1	100	62.745	Gambusia_affinis
ENSLOCG00000004711	gfi1ab	100	69.554	ENSGAFG00000016637	gfi1ab	100	69.307	Gambusia_affinis
ENSLOCG00000004711	gfi1ab	100	70.677	ENSGACG00000004257	gfi1ab	97	70.677	Gasterosteus_aculeatus
ENSLOCG00000004711	gfi1ab	100	66.513	ENSGGOG00000005320	GFI1	100	66.513	Gorilla_gorilla
ENSLOCG00000004711	gfi1ab	100	69.925	ENSHBUG00000011969	gfi1ab	100	69.674	Haplochromis_burtoni
ENSLOCG00000004711	gfi1ab	100	66.667	ENSHGLG00000008020	GFI1	100	67.133	Heterocephalus_glaber_female
ENSLOCG00000004711	gfi1ab	100	66.667	ENSHGLG00100000610	GFI1	100	67.133	Heterocephalus_glaber_male
ENSLOCG00000004711	gfi1ab	100	57.311	ENSHCOG00000008590	gfi1ab	100	55.896	Hippocampus_comes
ENSLOCG00000004711	gfi1ab	100	60.494	ENSHCOG00000019555	GFI1	100	65.909	Hippocampus_comes
ENSLOCG00000004711	gfi1ab	100	68.090	ENSIPUG00000010071	gfi1ab	87	68.090	Ictalurus_punctatus
ENSLOCG00000004711	gfi1ab	62	48.837	ENSIPUG00000021407	-	76	48.837	Ictalurus_punctatus
ENSLOCG00000004711	gfi1ab	100	63.861	ENSIPUG00000013414	GFI1	100	63.861	Ictalurus_punctatus
ENSLOCG00000004711	gfi1ab	100	64.334	ENSSTOG00000014583	GFI1	100	65.675	Ictidomys_tridecemlineatus
ENSLOCG00000004711	gfi1ab	100	69.173	ENSKMAG00000003810	gfi1ab	100	68.922	Kryptolebias_marmoratus
ENSLOCG00000004711	gfi1ab	100	70.574	ENSLBEG00000027776	gfi1ab	100	70.324	Labrus_bergylta
ENSLOCG00000004711	gfi1ab	100	75.312	ENSLACG00000013362	GFI1	98	75.312	Latimeria_chalumnae
ENSLOCG00000004711	gfi1ab	100	66.351	ENSLAFG00000018346	GFI1	100	66.351	Loxodonta_africana
ENSLOCG00000004711	gfi1ab	100	66.513	ENSMFAG00000045801	GFI1	100	66.513	Macaca_fascicularis
ENSLOCG00000004711	gfi1ab	100	66.513	ENSMNEG00000036338	GFI1	100	66.513	Macaca_nemestrina
ENSLOCG00000004711	gfi1ab	100	66.513	ENSMLEG00000036181	GFI1	100	66.513	Mandrillus_leucophaeus
ENSLOCG00000004711	gfi1ab	100	72.500	ENSMAMG00000008125	gfi1ab	100	72.250	Mastacembelus_armatus
ENSLOCG00000004711	gfi1ab	100	72.070	ENSMZEG00005009895	gfi1ab	100	71.820	Maylandia_zebra
ENSLOCG00000004711	gfi1ab	86	73.352	ENSMGAG00000008187	GFI1	100	73.352	Meleagris_gallopavo
ENSLOCG00000004711	gfi1ab	100	66.282	ENSMICG00000047208	GFI1	100	66.513	Microcebus_murinus
ENSLOCG00000004711	gfi1ab	100	65.087	ENSMMOG00000005556	gfi1ab	100	64.838	Mola_mola
ENSLOCG00000004711	gfi1ab	100	66.744	ENSMODG00000011802	GFI1	100	66.744	Monodelphis_domestica
ENSLOCG00000004711	gfi1ab	100	68.421	ENSMALG00000014672	gfi1ab	100	68.170	Monopterus_albus
ENSLOCG00000004711	gfi1ab	100	64.651	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSLOCG00000004711	gfi1ab	100	64.977	ENSMUSG00000029275	Gfi1	100	65.116	Mus_musculus
ENSLOCG00000004711	gfi1ab	100	64.516	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSLOCG00000004711	gfi1ab	100	64.977	MGP_SPRETEiJ_G0028507	Gfi1	100	65.581	Mus_spretus
ENSLOCG00000004711	gfi1ab	100	68.983	ENSMPUG00000004178	GFI1	97	69.212	Mustela_putorius_furo
ENSLOCG00000004711	gfi1ab	100	65.217	ENSMLUG00000015191	GFI1	97	66.589	Myotis_lucifugus
ENSLOCG00000004711	gfi1ab	100	70.545	ENSNBRG00000015774	gfi1ab	100	70.297	Neolamprologus_brichardi
ENSLOCG00000004711	gfi1ab	88	67.448	ENSNLEG00000010470	GFI1	93	67.905	Nomascus_leucogenys
ENSLOCG00000004711	gfi1ab	100	67.436	ENSOPRG00000001473	GFI1	100	66.975	Ochotona_princeps
ENSLOCG00000004711	gfi1ab	100	71.820	ENSONIG00000019246	gfi1ab	100	71.571	Oreochromis_niloticus
ENSLOCG00000004711	gfi1ab	98	60.638	ENSOCUG00000023553	GFI1	93	60.743	Oryctolagus_cuniculus
ENSLOCG00000004711	gfi1ab	100	68.473	ENSORLG00000013806	gfi1ab	100	68.227	Oryzias_latipes
ENSLOCG00000004711	gfi1ab	100	63.682	ENSORLG00000005060	GFI1	100	63.682	Oryzias_latipes
ENSLOCG00000004711	gfi1ab	100	69.750	ENSORLG00020001602	gfi1ab	100	69.500	Oryzias_latipes_hni
ENSLOCG00000004711	gfi1ab	100	56.642	ENSORLG00020002817	GFI1	100	68.512	Oryzias_latipes_hni
ENSLOCG00000004711	gfi1ab	100	60.652	ENSORLG00015006070	GFI1	100	62.469	Oryzias_latipes_hsok
ENSLOCG00000004711	gfi1ab	100	63.636	ENSOMEG00000016722	GFI1	100	63.547	Oryzias_melastigma
ENSLOCG00000004711	gfi1ab	100	66.583	ENSOGAG00000027913	GFI1	100	66.583	Otolemur_garnettii
ENSLOCG00000004711	gfi1ab	74	97.143	ENSOARG00000016329	GFI1	94	69.466	Ovis_aries
ENSLOCG00000004711	gfi1ab	100	68.828	ENSPPAG00000042186	GFI1	100	68.828	Pan_paniscus
ENSLOCG00000004711	gfi1ab	100	66.282	ENSPPRG00000007521	GFI1	100	66.744	Panthera_pardus
ENSLOCG00000004711	gfi1ab	100	66.513	ENSPTRG00000043053	GFI1	100	66.513	Pan_troglodytes
ENSLOCG00000004711	gfi1ab	100	66.513	ENSPANG00000016433	GFI1	100	66.513	Papio_anubis
ENSLOCG00000004711	gfi1ab	100	81.297	ENSPKIG00000004263	GFI1	100	81.047	Paramormyrops_kingsleyae
ENSLOCG00000004711	gfi1ab	86	74.785	ENSPSIG00000008734	GFI1	97	74.785	Pelodiscus_sinensis
ENSLOCG00000004711	gfi1ab	99	54.453	ENSPMGG00000011041	GFI1	99	54.453	Periophthalmus_magnuspinnatus
ENSLOCG00000004711	gfi1ab	100	68.010	ENSPMGG00000012546	gfi1ab	100	68.262	Periophthalmus_magnuspinnatus
ENSLOCG00000004711	gfi1ab	100	68.000	ENSPCIG00000013728	GFI1	100	68.235	Phascolarctos_cinereus
ENSLOCG00000004711	gfi1ab	100	69.307	ENSPFOG00000023214	gfi1ab	100	69.059	Poecilia_formosa
ENSLOCG00000004711	gfi1ab	100	64.059	ENSPLAG00000005376	GFI1	91	64.059	Poecilia_latipinna
ENSLOCG00000004711	gfi1ab	100	69.307	ENSPLAG00000010879	gfi1ab	99	86.486	Poecilia_latipinna
ENSLOCG00000004711	gfi1ab	100	69.307	ENSPMEG00000013694	gfi1ab	100	69.059	Poecilia_mexicana
ENSLOCG00000004711	gfi1ab	100	64.691	ENSPMEG00000019299	GFI1	100	64.691	Poecilia_mexicana
ENSLOCG00000004711	gfi1ab	100	68.983	ENSPREG00000014097	gfi1ab	100	68.734	Poecilia_reticulata
ENSLOCG00000004711	gfi1ab	100	57.071	ENSPREG00000007997	GFI1	100	57.071	Poecilia_reticulata
ENSLOCG00000004711	gfi1ab	100	55.963	ENSPCAG00000011020	GFI1	100	55.963	Procavia_capensis
ENSLOCG00000004711	gfi1ab	100	65.589	ENSPCOG00000020540	GFI1	100	66.282	Propithecus_coquereli
ENSLOCG00000004711	gfi1ab	100	67.290	ENSPVAG00000006928	GFI1	100	68.458	Pteropus_vampyrus
ENSLOCG00000004711	gfi1ab	100	72.319	ENSPNYG00000021183	gfi1ab	100	72.070	Pundamilia_nyererei
ENSLOCG00000004711	gfi1ab	100	60.147	ENSPNAG00000028014	GFI1	100	60.147	Pygocentrus_nattereri
ENSLOCG00000004711	gfi1ab	100	68.170	ENSPNAG00000027258	gfi1ab	100	67.920	Pygocentrus_nattereri
ENSLOCG00000004711	gfi1ab	100	64.434	ENSRNOG00000002042	Gfi1	100	64.434	Rattus_norvegicus
ENSLOCG00000004711	gfi1ab	100	66.513	ENSRBIG00000036467	GFI1	100	66.513	Rhinopithecus_bieti
ENSLOCG00000004711	gfi1ab	100	66.513	ENSRROG00000031687	GFI1	100	66.513	Rhinopithecus_roxellana
ENSLOCG00000004711	gfi1ab	100	65.820	ENSSBOG00000031300	GFI1	100	66.051	Saimiri_boliviensis_boliviensis
ENSLOCG00000004711	gfi1ab	100	80.000	ENSSFOG00015020295	gfi1	100	79.250	Scleropages_formosus
ENSLOCG00000004711	gfi1ab	100	68.579	ENSSMAG00000002782	gfi1ab	100	68.329	Scophthalmus_maximus
ENSLOCG00000004711	gfi1ab	100	68.342	ENSSDUG00000022410	gfi1ab	100	68.342	Seriola_dumerili
ENSLOCG00000004711	gfi1ab	100	68.342	ENSSLDG00000020163	gfi1ab	100	68.342	Seriola_lalandi_dorsalis
ENSLOCG00000004711	gfi1ab	79	90.625	ENSSPAG00000009140	gfi1ab	100	90.625	Stegastes_partitus
ENSLOCG00000004711	gfi1ab	100	66.125	ENSSSCG00000006902	GFI1	100	68.000	Sus_scrofa
ENSLOCG00000004711	gfi1ab	86	71.758	ENSTGUG00000006060	GFI1	100	71.758	Taeniopygia_guttata
ENSLOCG00000004711	gfi1ab	100	68.159	ENSTRUG00000000415	gfi1ab	100	67.910	Takifugu_rubripes
ENSLOCG00000004711	gfi1ab	100	64.589	ENSTNIG00000000651	gfi1ab	97	62.745	Tetraodon_nigroviridis
ENSLOCG00000004711	gfi1ab	100	66.667	ENSTTRG00000000082	GFI1	100	67.130	Tursiops_truncatus
ENSLOCG00000004711	gfi1ab	100	67.689	ENSUAMG00000021124	GFI1	91	68.660	Ursus_americanus
ENSLOCG00000004711	gfi1ab	100	68.905	ENSXETG00000023006	gfi1	98	68.905	Xenopus_tropicalis
ENSLOCG00000004711	gfi1ab	100	69.652	ENSXMAG00000010523	gfi1ab	100	69.403	Xiphophorus_maculatus
ENSLOCG00000004711	gfi1ab	86	57.386	ENSXMAG00000009274	GFI1	70	57.386	Xiphophorus_maculatus