EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004887 (Gene tree)
Gene ID: -
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 1812 bases
Position: chrLG23:8785087-8786898
Accession: 18411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005873	zf-C2H2	PF00096.26	2.2e-26	1	5
ENSLOCP00000005873	zf-C2H2	PF00096.26	2.2e-26	2	5
ENSLOCP00000005873	zf-C2H2	PF00096.26	2.2e-26	3	5
ENSLOCP00000005873	zf-C2H2	PF00096.26	2.2e-26	4	5
ENSLOCP00000005873	zf-C2H2	PF00096.26	2.2e-26	5	5
ENSLOCP00000005873	zf-met	PF12874.7	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005881	SNAI3-201	489	-	ENSLOCP00000005873	163 (aa)	-	W5MBW4

Gene Model

Click here to download ENSLOCG00000004887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004887	SNAI3	87	41.584	ENSLOCG00000000714	-	90	41.584
ENSLOCG00000004887	SNAI3	87	39.423	ENSLOCG00000017422	-	68	39.423
ENSLOCG00000004887	SNAI3	94	40.196	ENSLOCG00000016466	-	98	35.043
ENSLOCG00000004887	SNAI3	85	38.961	ENSLOCG00000018285	-	100	38.961
ENSLOCG00000004887	SNAI3	87	34.965	ENSLOCG00000004661	-	99	34.965
ENSLOCG00000004887	SNAI3	92	36.667	ENSLOCG00000004208	-	99	36.429
ENSLOCG00000004887	SNAI3	91	54.054	ENSLOCG00000007573	scrt1b	50	55.396
ENSLOCG00000004887	SNAI3	94	38.621	ENSLOCG00000009778	prdm5	52	40.000
ENSLOCG00000004887	SNAI3	88	39.474	ENSLOCG00000014144	-	99	36.567
ENSLOCG00000004887	SNAI3	91	42.453	ENSLOCG00000017736	znf648	62	42.453
ENSLOCG00000004887	SNAI3	90	39.860	ENSLOCG00000017864	-	98	40.000
ENSLOCG00000004887	SNAI3	87	45.570	ENSLOCG00000014366	-	92	45.570
ENSLOCG00000004887	SNAI3	96	35.849	ENSLOCG00000003678	znf319b	76	35.849
ENSLOCG00000004887	SNAI3	86	68.966	ENSLOCG00000004443	snai1a	58	68.966
ENSLOCG00000004887	SNAI3	96	35.849	ENSLOCG00000000544	znf319b	76	35.849
ENSLOCG00000004887	SNAI3	87	41.892	ENSLOCG00000005750	gfi1b	51	39.167
ENSLOCG00000004887	SNAI3	91	81.879	ENSLOCG00000005992	SNAI2	52	85.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004887	SNAI3	92	83.444	ENSG00000019549	SNAI2	52	86.429	Homo_sapiens
ENSLOCG00000004887	SNAI3	92	83.444	ENSAMEG00000009606	SNAI2	52	86.429	Ailuropoda_melanoleuca
ENSLOCG00000004887	SNAI3	92	83.444	ENSANAG00000021163	SNAI2	52	86.429	Aotus_nancymaae
ENSLOCG00000004887	SNAI3	92	83.444	ENSBTAG00000013227	SNAI2	52	86.429	Bos_taurus
ENSLOCG00000004887	SNAI3	92	83.444	ENSCJAG00000013499	SNAI2	52	86.429	Callithrix_jacchus
ENSLOCG00000004887	SNAI3	92	83.444	ENSCAFG00000006638	SNAI2	52	86.429	Canis_familiaris
ENSLOCG00000004887	SNAI3	92	83.444	ENSCAFG00020015384	SNAI2	52	86.429	Canis_lupus_dingo
ENSLOCG00000004887	SNAI3	92	82.781	ENSCHIG00000024410	SNAI2	52	85.714	Capra_hircus
ENSLOCG00000004887	SNAI3	92	83.444	ENSTSYG00000030892	SNAI2	52	86.429	Carlito_syrichta
ENSLOCG00000004887	SNAI3	98	78.125	ENSCAPG00000013078	SNAI2	63	85.000	Cavia_aperea
ENSLOCG00000004887	SNAI3	92	83.444	ENSCCAG00000024100	SNAI2	52	86.429	Cebus_capucinus
ENSLOCG00000004887	SNAI3	92	83.444	ENSCATG00000028656	SNAI2	52	86.429	Cercocebus_atys
ENSLOCG00000004887	SNAI3	92	83.444	ENSCLAG00000011797	SNAI2	52	86.429	Chinchilla_lanigera
ENSLOCG00000004887	SNAI3	92	83.444	ENSCSAG00000014787	SNAI2	52	86.429	Chlorocebus_sabaeus
ENSLOCG00000004887	SNAI3	92	83.444	ENSCPBG00000020255	SNAI2	52	86.429	Chrysemys_picta_bellii
ENSLOCG00000004887	SNAI3	88	86.014	ENSCPBG00000023474	SNAI3	51	86.014	Chrysemys_picta_bellii
ENSLOCG00000004887	SNAI3	82	65.672	ENSCSAVG00000009819	-	69	65.672	Ciona_savignyi
ENSLOCG00000004887	SNAI3	92	83.444	ENSCANG00000029656	SNAI2	52	86.429	Colobus_angolensis_palliatus
ENSLOCG00000004887	SNAI3	91	83.893	ENSCGRG00001013674	Snai2	52	86.429	Cricetulus_griseus_chok1gshd
ENSLOCG00000004887	SNAI3	91	83.893	ENSCGRG00000012119	Snai2	52	86.429	Cricetulus_griseus_crigri
ENSLOCG00000004887	SNAI3	92	83.444	ENSDORG00000029620	Snai2	54	86.429	Dipodomys_ordii
ENSLOCG00000004887	SNAI3	79	76.296	ENSETEG00000016371	-	96	76.296	Echinops_telfairi
ENSLOCG00000004887	SNAI3	97	87.342	ENSELUG00000018742	-	52	94.444	Esox_lucius
ENSLOCG00000004887	SNAI3	85	82.014	ENSFALG00000012974	-	62	80.851	Ficedula_albicollis
ENSLOCG00000004887	SNAI3	92	83.444	ENSFDAG00000016958	SNAI2	52	86.429	Fukomys_damarensis
ENSLOCG00000004887	SNAI3	88	85.315	ENSGAGG00000023571	SNAI3	51	85.315	Gopherus_agassizii
ENSLOCG00000004887	SNAI3	92	83.444	ENSGAGG00000000426	SNAI2	52	86.429	Gopherus_agassizii
ENSLOCG00000004887	SNAI3	92	83.444	ENSGGOG00000000959	SNAI2	52	86.429	Gorilla_gorilla
ENSLOCG00000004887	SNAI3	86	82.270	ENSHCOG00000019435	SNAI2	57	82.270	Hippocampus_comes
ENSLOCG00000004887	SNAI3	86	84.286	ENSIPUG00000000131	snai2	53	84.286	Ictalurus_punctatus
ENSLOCG00000004887	SNAI3	92	83.444	ENSSTOG00000028743	SNAI2	52	86.429	Ictidomys_tridecemlineatus
ENSLOCG00000004887	SNAI3	98	71.605	ENSLAFG00000005117	SNAI3	51	79.856	Loxodonta_africana
ENSLOCG00000004887	SNAI3	92	83.444	ENSLAFG00000009299	SNAI2	52	86.429	Loxodonta_africana
ENSLOCG00000004887	SNAI3	92	83.444	ENSMFAG00000046061	SNAI2	52	86.429	Macaca_fascicularis
ENSLOCG00000004887	SNAI3	92	83.444	ENSMMUG00000016195	SNAI2	52	86.429	Macaca_mulatta
ENSLOCG00000004887	SNAI3	92	83.444	ENSMNEG00000034216	SNAI2	52	86.429	Macaca_nemestrina
ENSLOCG00000004887	SNAI3	92	83.444	ENSMLEG00000034407	SNAI2	52	86.429	Mandrillus_leucophaeus
ENSLOCG00000004887	SNAI3	91	84.564	ENSMAUG00000008119	Snai2	52	87.143	Mesocricetus_auratus
ENSLOCG00000004887	SNAI3	92	83.444	ENSMOCG00000006622	Snai2	52	86.429	Microtus_ochrogaster
ENSLOCG00000004887	SNAI3	86	86.429	ENSMODG00000010173	SNAI2	52	86.429	Monodelphis_domestica
ENSLOCG00000004887	SNAI3	97	80.503	MGP_CAROLIEiJ_G0020483	Snai2	52	86.429	Mus_caroli
ENSLOCG00000004887	SNAI3	97	80.503	ENSMUSG00000022676	Snai2	52	86.429	Mus_musculus
ENSLOCG00000004887	SNAI3	97	80.503	MGP_PahariEiJ_G0016188	Snai2	52	86.429	Mus_pahari
ENSLOCG00000004887	SNAI3	97	80.503	MGP_SPRETEiJ_G0021379	Snai2	52	86.429	Mus_spretus
ENSLOCG00000004887	SNAI3	92	83.444	ENSMPUG00000010793	SNAI2	52	86.429	Mustela_putorius_furo
ENSLOCG00000004887	SNAI3	92	83.444	ENSMLUG00000001086	SNAI2	52	86.429	Myotis_lucifugus
ENSLOCG00000004887	SNAI3	92	83.444	ENSNLEG00000013421	SNAI2	52	86.429	Nomascus_leucogenys
ENSLOCG00000004887	SNAI3	90	83.673	ENSMEUG00000009510	SNAI2	52	86.765	Notamacropus_eugenii
ENSLOCG00000004887	SNAI3	91	83.893	ENSOANG00000007267	SNAI2	52	86.429	Ornithorhynchus_anatinus
ENSLOCG00000004887	SNAI3	92	82.781	ENSOARG00000013030	SNAI2	52	85.714	Ovis_aries
ENSLOCG00000004887	SNAI3	92	83.444	ENSPPAG00000015662	SNAI2	52	86.429	Pan_paniscus
ENSLOCG00000004887	SNAI3	92	83.444	ENSPPRG00000012562	-	52	86.429	Panthera_pardus
ENSLOCG00000004887	SNAI3	92	83.444	ENSPTRG00000020235	SNAI2	52	86.429	Pan_troglodytes
ENSLOCG00000004887	SNAI3	92	83.444	ENSPANG00000017540	SNAI2	52	86.429	Papio_anubis
ENSLOCG00000004887	SNAI3	98	83.750	ENSPKIG00000007872	SNAI3	50	88.966	Paramormyrops_kingsleyae
ENSLOCG00000004887	SNAI3	97	79.874	ENSPKIG00000002254	SNAI2	58	85.000	Paramormyrops_kingsleyae
ENSLOCG00000004887	SNAI3	92	83.444	ENSPSIG00000016395	SNAI2	52	86.429	Pelodiscus_sinensis
ENSLOCG00000004887	SNAI3	88	84.615	ENSPSIG00000004262	SNAI3	57	84.615	Pelodiscus_sinensis
ENSLOCG00000004887	SNAI3	87	84.397	ENSPMGG00000013179	SNAI2	56	84.397	Periophthalmus_magnuspinnatus
ENSLOCG00000004887	SNAI3	92	83.444	ENSPEMG00000011739	Snai2	52	86.429	Peromyscus_maniculatus_bairdii
ENSLOCG00000004887	SNAI3	92	83.444	ENSPCIG00000025156	SNAI2	52	86.429	Phascolarctos_cinereus
ENSLOCG00000004887	SNAI3	97	77.358	ENSPREG00000008528	SNAI2	51	84.286	Poecilia_reticulata
ENSLOCG00000004887	SNAI3	92	83.444	ENSPPYG00000018578	SNAI2	52	86.429	Pongo_abelii
ENSLOCG00000004887	SNAI3	92	83.444	ENSPCOG00000015656	SNAI2	52	86.429	Propithecus_coquereli
ENSLOCG00000004887	SNAI3	92	83.444	ENSPVAG00000009457	SNAI2	52	86.429	Pteropus_vampyrus
ENSLOCG00000004887	SNAI3	92	83.444	ENSRBIG00000041133	SNAI2	52	86.429	Rhinopithecus_bieti
ENSLOCG00000004887	SNAI3	92	83.444	ENSRROG00000032273	SNAI2	52	86.429	Rhinopithecus_roxellana
ENSLOCG00000004887	SNAI3	92	83.444	ENSSBOG00000035774	SNAI2	52	86.429	Saimiri_boliviensis_boliviensis
ENSLOCG00000004887	SNAI3	92	83.444	ENSSHAG00000004205	SNAI2	52	86.429	Sarcophilus_harrisii
ENSLOCG00000004887	SNAI3	89	82.877	ENSSFOG00015018025	SNAI2	52	85.000	Scleropages_formosus
ENSLOCG00000004887	SNAI3	92	83.444	ENSSPUG00000005427	-	52	86.429	Sphenodon_punctatus
ENSLOCG00000004887	SNAI3	92	83.444	ENSSSCG00000039568	SNAI2	52	86.429	Sus_scrofa
ENSLOCG00000004887	SNAI3	92	83.444	ENSUAMG00000014942	SNAI2	61	86.429	Ursus_americanus
ENSLOCG00000004887	SNAI3	92	83.444	ENSUMAG00000006525	SNAI2	53	86.429	Ursus_maritimus
ENSLOCG00000004887	SNAI3	92	83.444	ENSVVUG00000017625	SNAI2	52	86.429	Vulpes_vulpes
ENSLOCG00000004887	SNAI3	86	85.714	ENSXETG00000024006	snai2	53	85.714	Xenopus_tropicalis