EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004918 (Gene tree)
Gene ID: 102696078
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 9205 bases
Position: chrLG14:8769404-8778608
Accession: 102696078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005914	MMR_HSR1	PF01926.23	8.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005922	-	1944	XM_006637724	ENSLOCP00000005914	647 (aa)	-	W5MC05

Gene Model

Click here to download ENSLOCG00000004918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004918's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004918	lsg1	99	66.364	ENSG00000041802	LSG1	90	83.230	Homo_sapiens
ENSLOCG00000004918	lsg1	100	69.863	ENSAPOG00000009694	lsg1	99	70.359	Acanthochromis_polyacanthus
ENSLOCG00000004918	lsg1	99	64.723	ENSAMEG00000009343	LSG1	98	65.138	Ailuropoda_melanoleuca
ENSLOCG00000004918	lsg1	98	72.144	ENSACIG00000012406	lsg1	98	71.518	Amphilophus_citrinellus
ENSLOCG00000004918	lsg1	100	68.060	ENSAOCG00000016066	lsg1	99	69.969	Amphiprion_ocellaris
ENSLOCG00000004918	lsg1	100	70.615	ENSAPEG00000003252	lsg1	99	69.457	Amphiprion_percula
ENSLOCG00000004918	lsg1	98	72.586	ENSATEG00000011794	lsg1	98	73.041	Anabas_testudineus
ENSLOCG00000004918	lsg1	95	63.722	ENSACAG00000004222	LSG1	100	63.016	Anolis_carolinensis
ENSLOCG00000004918	lsg1	99	65.460	ENSANAG00000021153	LSG1	98	65.639	Aotus_nancymaae
ENSLOCG00000004918	lsg1	100	71.644	ENSACLG00000000520	lsg1	98	71.163	Astatotilapia_calliptera
ENSLOCG00000004918	lsg1	100	71.145	ENSAMXG00000008271	lsg1	98	71.451	Astyanax_mexicanus
ENSLOCG00000004918	lsg1	99	65.762	ENSBTAG00000008461	LSG1	98	66.410	Bos_taurus
ENSLOCG00000004918	lsg1	73	45.267	WBGene00016907	C53H9.2	82	51.795	Caenorhabditis_elegans
ENSLOCG00000004918	lsg1	99	64.531	ENSCJAG00000013962	LSG1	98	65.789	Callithrix_jacchus
ENSLOCG00000004918	lsg1	95	65.823	ENSCAFG00000013445	LSG1	100	65.728	Canis_familiaris
ENSLOCG00000004918	lsg1	99	64.768	ENSCAFG00020002216	LSG1	99	64.087	Canis_lupus_dingo
ENSLOCG00000004918	lsg1	100	65.113	ENSCHIG00000015769	LSG1	98	66.615	Capra_hircus
ENSLOCG00000004918	lsg1	99	65.053	ENSTSYG00000001447	LSG1	98	64.126	Carlito_syrichta
ENSLOCG00000004918	lsg1	95	65.323	ENSCAPG00000009856	LSG1	99	64.677	Cavia_aperea
ENSLOCG00000004918	lsg1	99	65.053	ENSCCAG00000035744	LSG1	98	65.224	Cebus_capucinus
ENSLOCG00000004918	lsg1	99	66.063	ENSCATG00000042060	LSG1	98	65.385	Cercocebus_atys
ENSLOCG00000004918	lsg1	99	66.415	ENSCSAG00000008796	LSG1	90	67.233	Chlorocebus_sabaeus
ENSLOCG00000004918	lsg1	100	66.418	ENSCPBG00000015941	LSG1	82	67.123	Chrysemys_picta_bellii
ENSLOCG00000004918	lsg1	70	61.735	ENSCING00000007079	-	92	61.735	Ciona_intestinalis
ENSLOCG00000004918	lsg1	78	55.020	ENSCSAVG00000002514	-	92	58.605	Ciona_savignyi
ENSLOCG00000004918	lsg1	99	66.061	ENSCANG00000030709	LSG1	98	65.581	Colobus_angolensis_palliatus
ENSLOCG00000004918	lsg1	99	65.522	ENSCGRG00001019846	Lsg1	98	65.957	Cricetulus_griseus_chok1gshd
ENSLOCG00000004918	lsg1	99	65.522	ENSCGRG00000014617	Lsg1	98	65.957	Cricetulus_griseus_crigri
ENSLOCG00000004918	lsg1	98	68.634	ENSCSEG00000008522	lsg1	98	68.168	Cynoglossus_semilaevis
ENSLOCG00000004918	lsg1	97	71.851	ENSCVAG00000002484	lsg1	98	72.484	Cyprinodon_variegatus
ENSLOCG00000004918	lsg1	100	72.923	ENSDARG00000015352	lsg1	98	72.799	Danio_rerio
ENSLOCG00000004918	lsg1	99	65.714	ENSDNOG00000006224	LSG1	98	65.284	Dasypus_novemcinctus
ENSLOCG00000004918	lsg1	99	47.626	FBgn0266284	Ns3	98	47.492	Drosophila_melanogaster
ENSLOCG00000004918	lsg1	88	73.684	ENSETEG00000003888	LSG1	87	79.032	Echinops_telfairi
ENSLOCG00000004918	lsg1	88	57.119	ENSEBUG00000003119	lsg1	85	56.926	Eptatretus_burgeri
ENSLOCG00000004918	lsg1	99	67.171	ENSEASG00005000678	LSG1	98	68.210	Equus_asinus_asinus
ENSLOCG00000004918	lsg1	99	67.625	ENSECAG00000017659	LSG1	98	68.673	Equus_caballus
ENSLOCG00000004918	lsg1	87	61.864	ENSEEUG00000015217	LSG1	75	61.864	Erinaceus_europaeus
ENSLOCG00000004918	lsg1	100	68.550	ENSELUG00000023973	lsg1	98	68.955	Esox_lucius
ENSLOCG00000004918	lsg1	100	65.710	ENSFCAG00000024957	LSG1	98	66.256	Felis_catus
ENSLOCG00000004918	lsg1	99	60.089	ENSFALG00000007210	LSG1	97	62.773	Ficedula_albicollis
ENSLOCG00000004918	lsg1	99	64.977	ENSFDAG00000017373	LSG1	98	65.109	Fukomys_damarensis
ENSLOCG00000004918	lsg1	97	69.782	ENSFHEG00000003680	lsg1	98	70.330	Fundulus_heteroclitus
ENSLOCG00000004918	lsg1	84	80.658	ENSGMOG00000015834	lsg1	86	80.658	Gadus_morhua
ENSLOCG00000004918	lsg1	99	62.745	ENSGALG00000007058	LSG1	86	63.174	Gallus_gallus
ENSLOCG00000004918	lsg1	97	70.016	ENSGAFG00000015831	lsg1	98	70.047	Gambusia_affinis
ENSLOCG00000004918	lsg1	98	69.088	ENSGACG00000009323	lsg1	98	67.846	Gasterosteus_aculeatus
ENSLOCG00000004918	lsg1	99	66.112	ENSGGOG00000000520	LSG1	98	66.924	Gorilla_gorilla
ENSLOCG00000004918	lsg1	100	72.519	ENSHBUG00000005659	lsg1	98	72.057	Haplochromis_burtoni
ENSLOCG00000004918	lsg1	99	63.470	ENSHGLG00000017390	LSG1	98	64.031	Heterocephalus_glaber_female
ENSLOCG00000004918	lsg1	99	63.470	ENSHGLG00100018587	LSG1	98	64.031	Heterocephalus_glaber_male
ENSLOCG00000004918	lsg1	97	70.376	ENSHCOG00000016848	lsg1	98	70.846	Hippocampus_comes
ENSLOCG00000004918	lsg1	100	71.385	ENSIPUG00000008631	lsg1	98	71.384	Ictalurus_punctatus
ENSLOCG00000004918	lsg1	75	59.841	ENSSTOG00000010234	LSG1	92	60.317	Ictidomys_tridecemlineatus
ENSLOCG00000004918	lsg1	99	67.127	ENSJJAG00000015513	Lsg1	98	66.980	Jaculus_jaculus
ENSLOCG00000004918	lsg1	98	68.643	ENSKMAG00000009681	lsg1	98	67.852	Kryptolebias_marmoratus
ENSLOCG00000004918	lsg1	98	69.969	ENSLBEG00000024261	lsg1	98	69.969	Labrus_bergylta
ENSLOCG00000004918	lsg1	100	70.721	ENSLACG00000013399	LSG1	98	71.012	Latimeria_chalumnae
ENSLOCG00000004918	lsg1	99	66.055	ENSLAFG00000012919	-	98	66.044	Loxodonta_africana
ENSLOCG00000004918	lsg1	99	66.415	ENSMFAG00000039903	LSG1	98	65.688	Macaca_fascicularis
ENSLOCG00000004918	lsg1	99	66.212	ENSMMUG00000010708	LSG1	98	67.079	Macaca_mulatta
ENSLOCG00000004918	lsg1	99	66.263	ENSMNEG00000031538	LSG1	98	65.379	Macaca_nemestrina
ENSLOCG00000004918	lsg1	99	66.061	ENSMLEG00000041184	LSG1	98	66.924	Mandrillus_leucophaeus
ENSLOCG00000004918	lsg1	100	72.282	ENSMAMG00000000470	lsg1	98	72.457	Mastacembelus_armatus
ENSLOCG00000004918	lsg1	100	72.672	ENSMZEG00005017865	lsg1	98	72.214	Maylandia_zebra
ENSLOCG00000004918	lsg1	88	63.667	ENSMGAG00000007050	LSG1	99	63.776	Meleagris_gallopavo
ENSLOCG00000004918	lsg1	95	63.507	ENSMAUG00000016976	Lsg1	93	62.097	Mesocricetus_auratus
ENSLOCG00000004918	lsg1	99	65.106	ENSMICG00000049087	LSG1	98	64.869	Microcebus_murinus
ENSLOCG00000004918	lsg1	99	65.611	ENSMOCG00000022136	Lsg1	98	65.303	Microtus_ochrogaster
ENSLOCG00000004918	lsg1	83	82.917	ENSMMOG00000008884	lsg1	97	82.917	Mola_mola
ENSLOCG00000004918	lsg1	99	56.515	ENSMODG00000019828	LSG1	98	55.521	Monodelphis_domestica
ENSLOCG00000004918	lsg1	100	65.601	MGP_CAROLIEiJ_G0020648	Lsg1	98	65.502	Mus_caroli
ENSLOCG00000004918	lsg1	100	65.906	ENSMUSG00000022538	Lsg1	98	66.615	Mus_musculus
ENSLOCG00000004918	lsg1	98	66.204	MGP_PahariEiJ_G0016352	Lsg1	98	65.356	Mus_pahari
ENSLOCG00000004918	lsg1	100	66.667	MGP_SPRETEiJ_G0021544	Lsg1	98	65.554	Mus_spretus
ENSLOCG00000004918	lsg1	100	64.750	ENSMPUG00000003734	LSG1	98	66.102	Mustela_putorius_furo
ENSLOCG00000004918	lsg1	100	66.316	ENSMLUG00000012548	LSG1	98	66.820	Myotis_lucifugus
ENSLOCG00000004918	lsg1	99	64.350	ENSNGAG00000021872	Lsg1	98	64.036	Nannospalax_galili
ENSLOCG00000004918	lsg1	99	66.063	ENSNLEG00000008293	LSG1	98	66.924	Nomascus_leucogenys
ENSLOCG00000004918	lsg1	67	73.196	ENSMEUG00000009041	-	83	73.196	Notamacropus_eugenii
ENSLOCG00000004918	lsg1	100	71.104	ENSONIG00000002635	lsg1	98	71.607	Oreochromis_niloticus
ENSLOCG00000004918	lsg1	95	68.839	ENSOANG00000012742	LSG1	99	68.839	Ornithorhynchus_anatinus
ENSLOCG00000004918	lsg1	99	65.367	ENSOCUG00000004817	LSG1	98	66.667	Oryctolagus_cuniculus
ENSLOCG00000004918	lsg1	98	70.126	ENSORLG00000007695	lsg1	98	70.755	Oryzias_latipes
ENSLOCG00000004918	lsg1	98	70.359	ENSORLG00020016286	lsg1	98	70.912	Oryzias_latipes_hni
ENSLOCG00000004918	lsg1	98	70.016	ENSORLG00015012025	lsg1	98	70.330	Oryzias_latipes_hsok
ENSLOCG00000004918	lsg1	98	70.394	ENSOMEG00000022379	lsg1	98	69.921	Oryzias_melastigma
ENSLOCG00000004918	lsg1	99	64.741	ENSOGAG00000003475	LSG1	98	64.000	Otolemur_garnettii
ENSLOCG00000004918	lsg1	100	65.113	ENSOARG00000020403	LSG1	98	65.745	Ovis_aries
ENSLOCG00000004918	lsg1	99	66.868	ENSPPAG00000029271	LSG1	98	67.233	Pan_paniscus
ENSLOCG00000004918	lsg1	100	65.022	ENSPPRG00000010281	LSG1	98	65.549	Panthera_pardus
ENSLOCG00000004918	lsg1	100	65.861	ENSPTIG00000010789	LSG1	98	66.410	Panthera_tigris_altaica
ENSLOCG00000004918	lsg1	99	66.717	ENSPTRG00000015760	LSG1	98	67.079	Pan_troglodytes
ENSLOCG00000004918	lsg1	99	66.263	ENSPANG00000018249	LSG1	98	65.533	Papio_anubis
ENSLOCG00000004918	lsg1	99	71.254	ENSPKIG00000002895	lsg1	98	70.388	Paramormyrops_kingsleyae
ENSLOCG00000004918	lsg1	96	62.946	ENSPSIG00000009821	LSG1	99	62.559	Pelodiscus_sinensis
ENSLOCG00000004918	lsg1	95	70.484	ENSPMGG00000000931	lsg1	100	69.839	Periophthalmus_magnuspinnatus
ENSLOCG00000004918	lsg1	99	66.767	ENSPEMG00000012082	-	98	66.359	Peromyscus_maniculatus_bairdii
ENSLOCG00000004918	lsg1	99	62.777	ENSPMAG00000007451	lsg1	98	62.387	Petromyzon_marinus
ENSLOCG00000004918	lsg1	100	64.103	ENSPCIG00000013890	LSG1	80	64.398	Phascolarctos_cinereus
ENSLOCG00000004918	lsg1	97	72.354	ENSPFOG00000021882	lsg1	98	70.671	Poecilia_formosa
ENSLOCG00000004918	lsg1	97	71.722	ENSPLAG00000019536	lsg1	98	70.047	Poecilia_latipinna
ENSLOCG00000004918	lsg1	97	71.339	ENSPMEG00000017281	lsg1	98	69.673	Poecilia_mexicana
ENSLOCG00000004918	lsg1	97	61.325	ENSPREG00000006048	lsg1	98	60.752	Poecilia_reticulata
ENSLOCG00000004918	lsg1	92	66.066	ENSPPYG00000014425	LSG1	98	66.443	Pongo_abelii
ENSLOCG00000004918	lsg1	89	75.000	ENSPCAG00000005511	LSG1	88	79.032	Procavia_capensis
ENSLOCG00000004918	lsg1	99	64.925	ENSPCOG00000012360	LSG1	98	65.639	Propithecus_coquereli
ENSLOCG00000004918	lsg1	100	71.644	ENSPNYG00000021994	lsg1	98	71.163	Pundamilia_nyererei
ENSLOCG00000004918	lsg1	100	73.272	ENSPNAG00000015533	lsg1	98	72.956	Pygocentrus_nattereri
ENSLOCG00000004918	lsg1	100	64.812	ENSRNOG00000001727	Lsg1	98	63.881	Rattus_norvegicus
ENSLOCG00000004918	lsg1	99	65.658	ENSRBIG00000029053	LSG1	98	66.873	Rhinopithecus_bieti
ENSLOCG00000004918	lsg1	99	65.658	ENSRROG00000037702	LSG1	98	66.873	Rhinopithecus_roxellana
ENSLOCG00000004918	lsg1	82	41.953	YGL099W	LSG1	60	59.064	Saccharomyces_cerevisiae
ENSLOCG00000004918	lsg1	99	65.909	ENSSBOG00000034938	LSG1	98	66.099	Saimiri_boliviensis_boliviensis
ENSLOCG00000004918	lsg1	78	63.027	ENSSHAG00000003487	LSG1	100	62.069	Sarcophilus_harrisii
ENSLOCG00000004918	lsg1	98	72.013	ENSSFOG00015008955	lsg1	98	71.541	Scleropages_formosus
ENSLOCG00000004918	lsg1	98	73.594	ENSSDUG00000004622	lsg1	98	73.469	Seriola_dumerili
ENSLOCG00000004918	lsg1	98	73.585	ENSSLDG00000010869	lsg1	98	73.270	Seriola_lalandi_dorsalis
ENSLOCG00000004918	lsg1	81	66.181	ENSSARG00000012981	LSG1	81	65.439	Sorex_araneus
ENSLOCG00000004918	lsg1	100	66.069	ENSSPUG00000016347	LSG1	98	65.606	Sphenodon_punctatus
ENSLOCG00000004918	lsg1	100	69.771	ENSSPAG00000005508	lsg1	99	70.487	Stegastes_partitus
ENSLOCG00000004918	lsg1	100	64.134	ENSSSCG00000011827	LSG1	98	64.752	Sus_scrofa
ENSLOCG00000004918	lsg1	89	61.614	ENSTGUG00000009068	LSG1	100	62.104	Taeniopygia_guttata
ENSLOCG00000004918	lsg1	97	67.241	ENSTRUG00000017380	lsg1	98	66.460	Takifugu_rubripes
ENSLOCG00000004918	lsg1	97	68.896	ENSTNIG00000015570	lsg1	98	69.436	Tetraodon_nigroviridis
ENSLOCG00000004918	lsg1	91	67.459	ENSTTRG00000000559	LSG1	89	67.857	Tursiops_truncatus
ENSLOCG00000004918	lsg1	100	64.962	ENSUAMG00000012454	LSG1	98	65.443	Ursus_americanus
ENSLOCG00000004918	lsg1	100	64.962	ENSUMAG00000000855	LSG1	98	65.443	Ursus_maritimus
ENSLOCG00000004918	lsg1	95	62.166	ENSVPAG00000012400	LSG1	100	62.009	Vicugna_pacos
ENSLOCG00000004918	lsg1	95	65.135	ENSVVUG00000008956	LSG1	97	63.735	Vulpes_vulpes
ENSLOCG00000004918	lsg1	100	67.417	ENSXETG00000003451	lsg1	98	68.634	Xenopus_tropicalis
ENSLOCG00000004918	lsg1	97	69.811	ENSXCOG00000003239	lsg1	98	69.552	Xiphophorus_couchianus
ENSLOCG00000004918	lsg1	97	69.449	ENSXMAG00000005536	lsg1	98	69.111	Xiphophorus_maculatus