EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000004942 (Gene tree)
Gene ID: 102696700
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 24651 bases
Position: chrLG5:6964828-6989478
Accession: 102696700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005959	RNA_pol_Rpb1_5	PF04998.17	8.5e-89	1	1
ENSLOCP00000005959	RNA_pol_Rpb1_4	PF05000.17	9.6e-30	1	1
ENSLOCP00000005959	RNA_pol_Rpb1_2	PF00623.20	9.6e-75	1	1
ENSLOCP00000005959	RNA_pol_Rpb1_3	PF04983.18	5e-39	1	1
ENSLOCP00000005959	RNA_pol_Rpb1_1	PF04997.12	7.3e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005967	-	4182	XM_006630267	ENSLOCP00000005959	1393 (aa)	XP_006630330	W5MC50

Gene Model

Click here to download ENSLOCG00000004942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000004942	polr3a	78	33.185	ENSLOCG00000010881	polr1a	68	33.333
ENSLOCG00000004942	polr3a	91	39.317	ENSLOCG00000013863	polr2a	70	39.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004942	polr3a	100	92.032	ENSG00000148606	POLR3A	98	94.937	Homo_sapiens
ENSLOCG00000004942	polr3a	62	87.963	ENSAPOG00000022727	polr3a	99	87.963	Acanthochromis_polyacanthus
ENSLOCG00000004942	polr3a	100	92.043	ENSAMEG00000017801	POLR3A	100	92.043	Ailuropoda_melanoleuca
ENSLOCG00000004942	polr3a	94	92.786	ENSACIG00000024504	polr3a	97	92.786	Amphilophus_citrinellus
ENSLOCG00000004942	polr3a	100	89.160	ENSAOCG00000003949	-	100	89.160	Amphiprion_ocellaris
ENSLOCG00000004942	polr3a	100	92.462	ENSAOCG00000002071	polr3a	100	92.462	Amphiprion_ocellaris
ENSLOCG00000004942	polr3a	100	92.319	ENSAPEG00000001966	-	100	92.319	Amphiprion_percula
ENSLOCG00000004942	polr3a	100	92.462	ENSAPEG00000013351	polr3a	100	92.462	Amphiprion_percula
ENSLOCG00000004942	polr3a	100	92.391	ENSATEG00000023277	polr3a	100	92.391	Anabas_testudineus
ENSLOCG00000004942	polr3a	99	92.671	ENSAPLG00000015878	POLR3A	99	92.671	Anas_platyrhynchos
ENSLOCG00000004942	polr3a	93	91.463	ENSACAG00000007985	POLR3A	99	91.463	Anolis_carolinensis
ENSLOCG00000004942	polr3a	100	89.462	ENSANAG00000028922	POLR3A	96	95.541	Aotus_nancymaae
ENSLOCG00000004942	polr3a	100	92.319	ENSACLG00000005914	polr3a	100	92.319	Astatotilapia_calliptera
ENSLOCG00000004942	polr3a	100	89.591	ENSAMXG00000018852	polr3a	100	89.591	Astyanax_mexicanus
ENSLOCG00000004942	polr3a	100	92.103	ENSBTAG00000013259	POLR3A	100	92.103	Bos_taurus
ENSLOCG00000004942	polr3a	99	56.423	WBGene00004411	rpc-1	99	56.423	Caenorhabditis_elegans
ENSLOCG00000004942	polr3a	100	91.960	ENSCJAG00000001015	POLR3A	100	91.960	Callithrix_jacchus
ENSLOCG00000004942	polr3a	100	92.032	ENSCAFG00000015546	POLR3A	100	92.032	Canis_familiaris
ENSLOCG00000004942	polr3a	100	92.032	ENSCAFG00020014711	POLR3A	100	92.032	Canis_lupus_dingo
ENSLOCG00000004942	polr3a	100	91.888	ENSCHIG00000000352	POLR3A	100	91.888	Capra_hircus
ENSLOCG00000004942	polr3a	100	91.457	ENSTSYG00000006671	POLR3A	100	91.457	Carlito_syrichta
ENSLOCG00000004942	polr3a	99	91.872	ENSCAPG00000016031	POLR3A	100	91.872	Cavia_aperea
ENSLOCG00000004942	polr3a	100	91.816	ENSCPOG00000022387	POLR3A	100	91.816	Cavia_porcellus
ENSLOCG00000004942	polr3a	100	90.165	ENSCCAG00000032995	POLR3A	96	94.937	Cebus_capucinus
ENSLOCG00000004942	polr3a	100	92.032	ENSCATG00000035842	POLR3A	98	94.937	Cercocebus_atys
ENSLOCG00000004942	polr3a	100	92.103	ENSCLAG00000009629	POLR3A	100	92.103	Chinchilla_lanigera
ENSLOCG00000004942	polr3a	100	92.032	ENSCSAG00000009292	POLR3A	100	92.032	Chlorocebus_sabaeus
ENSLOCG00000004942	polr3a	85	77.085	ENSCHOG00000008368	POLR3A	100	77.085	Choloepus_hoffmanni
ENSLOCG00000004942	polr3a	99	92.457	ENSCPBG00000002079	POLR3A	99	92.457	Chrysemys_picta_bellii
ENSLOCG00000004942	polr3a	99	69.446	ENSCSAVG00000009925	-	99	69.446	Ciona_savignyi
ENSLOCG00000004942	polr3a	86	87.888	ENSCANG00000041071	POLR3A	98	94.304	Colobus_angolensis_palliatus
ENSLOCG00000004942	polr3a	78	92.949	ENSCGRG00001015599	-	92	92.949	Cricetulus_griseus_chok1gshd
ENSLOCG00000004942	polr3a	88	91.033	ENSCGRG00000001019	Polr3a	100	91.033	Cricetulus_griseus_crigri
ENSLOCG00000004942	polr3a	100	92.462	ENSCSEG00000016653	polr3a	100	92.462	Cynoglossus_semilaevis
ENSLOCG00000004942	polr3a	100	92.103	ENSCVAG00000023049	polr3a	100	92.103	Cyprinodon_variegatus
ENSLOCG00000004942	polr3a	99	91.876	ENSDARG00000102569	polr3a	99	91.876	Danio_rerio
ENSLOCG00000004942	polr3a	100	91.385	ENSDNOG00000010194	POLR3A	100	91.385	Dasypus_novemcinctus
ENSLOCG00000004942	polr3a	100	91.744	ENSDORG00000000184	Polr3a	100	91.744	Dipodomys_ordii
ENSLOCG00000004942	polr3a	99	56.606	FBgn0030687	CG17209	99	56.606	Drosophila_melanogaster
ENSLOCG00000004942	polr3a	88	91.093	ENSETEG00000007477	POLR3A	89	91.093	Echinops_telfairi
ENSLOCG00000004942	polr3a	59	77.130	ENSEBUG00000013761	polr3a	98	77.130	Eptatretus_burgeri
ENSLOCG00000004942	polr3a	100	91.960	ENSEASG00005023053	POLR3A	100	91.960	Equus_asinus_asinus
ENSLOCG00000004942	polr3a	97	92.193	ENSECAG00000019416	POLR3A	100	91.919	Equus_caballus
ENSLOCG00000004942	polr3a	96	87.426	ENSEEUG00000001774	POLR3A	100	87.426	Erinaceus_europaeus
ENSLOCG00000004942	polr3a	100	91.046	ENSELUG00000014016	polr3a	100	91.046	Esox_lucius
ENSLOCG00000004942	polr3a	100	92.175	ENSFCAG00000000843	POLR3A	100	92.175	Felis_catus
ENSLOCG00000004942	polr3a	100	92.396	ENSFALG00000006913	POLR3A	100	92.396	Ficedula_albicollis
ENSLOCG00000004942	polr3a	100	91.673	ENSFDAG00000007813	POLR3A	100	91.673	Fukomys_damarensis
ENSLOCG00000004942	polr3a	92	92.651	ENSFHEG00000011922	polr3a	98	92.651	Fundulus_heteroclitus
ENSLOCG00000004942	polr3a	100	87.218	ENSGMOG00000000291	polr3a	99	87.218	Gadus_morhua
ENSLOCG00000004942	polr3a	100	92.606	ENSGALG00000004947	POLR3A	100	92.606	Gallus_gallus
ENSLOCG00000004942	polr3a	100	91.816	ENSGAFG00000005112	polr3a	100	91.816	Gambusia_affinis
ENSLOCG00000004942	polr3a	100	91.816	ENSGACG00000002304	polr3a	100	91.816	Gasterosteus_aculeatus
ENSLOCG00000004942	polr3a	95	92.372	ENSGAGG00000010386	POLR3A	98	92.372	Gopherus_agassizii
ENSLOCG00000004942	polr3a	99	90.988	ENSGGOG00000027729	POLR3A	98	94.937	Gorilla_gorilla
ENSLOCG00000004942	polr3a	100	92.319	ENSHBUG00000018098	polr3a	100	92.319	Haplochromis_burtoni
ENSLOCG00000004942	polr3a	100	91.601	ENSHGLG00000017899	POLR3A	100	91.601	Heterocephalus_glaber_female
ENSLOCG00000004942	polr3a	100	91.601	ENSHGLG00100008483	POLR3A	100	91.601	Heterocephalus_glaber_male
ENSLOCG00000004942	polr3a	100	91.457	ENSHCOG00000001075	polr3a	100	91.457	Hippocampus_comes
ENSLOCG00000004942	polr3a	100	91.816	ENSSTOG00000012983	POLR3A	100	91.816	Ictidomys_tridecemlineatus
ENSLOCG00000004942	polr3a	100	92.319	ENSKMAG00000015290	polr3a	100	92.319	Kryptolebias_marmoratus
ENSLOCG00000004942	polr3a	99	91.164	ENSLBEG00000017214	polr3a	99	91.164	Labrus_bergylta
ENSLOCG00000004942	polr3a	97	89.243	ENSLACG00000018557	POLR3A	99	89.243	Latimeria_chalumnae
ENSLOCG00000004942	polr3a	100	90.387	ENSLAFG00000016719	POLR3A	100	90.387	Loxodonta_africana
ENSLOCG00000004942	polr3a	100	91.960	ENSMFAG00000032218	POLR3A	100	91.960	Macaca_fascicularis
ENSLOCG00000004942	polr3a	100	91.960	ENSMMUG00000005514	POLR3A	98	94.937	Macaca_mulatta
ENSLOCG00000004942	polr3a	99	85.592	ENSMNEG00000035163	POLR3A	99	91.748	Macaca_nemestrina
ENSLOCG00000004942	polr3a	100	88.299	ENSMLEG00000030014	POLR3A	98	94.937	Mandrillus_leucophaeus
ENSLOCG00000004942	polr3a	100	92.391	ENSMAMG00000017497	polr3a	100	92.391	Mastacembelus_armatus
ENSLOCG00000004942	polr3a	100	92.319	ENSMZEG00005000576	polr3a	100	92.319	Maylandia_zebra
ENSLOCG00000004942	polr3a	100	74.468	ENSMGAG00000005713	-	100	74.468	Meleagris_gallopavo
ENSLOCG00000004942	polr3a	100	89.806	ENSMAUG00000016247	Polr3a	100	89.806	Mesocricetus_auratus
ENSLOCG00000004942	polr3a	100	92.175	ENSMICG00000005937	POLR3A	100	93.068	Microcebus_murinus
ENSLOCG00000004942	polr3a	100	91.744	ENSMOCG00000012185	Polr3a	100	91.744	Microtus_ochrogaster
ENSLOCG00000004942	polr3a	100	91.601	ENSMMOG00000013822	polr3a	100	91.601	Mola_mola
ENSLOCG00000004942	polr3a	100	91.816	ENSMODG00000001036	POLR3A	100	91.816	Monodelphis_domestica
ENSLOCG00000004942	polr3a	100	91.960	ENSMALG00000001249	polr3a	100	91.960	Monopterus_albus
ENSLOCG00000004942	polr3a	100	91.744	MGP_CAROLIEiJ_G0019016	Polr3a	100	91.744	Mus_caroli
ENSLOCG00000004942	polr3a	100	91.816	ENSMUSG00000025280	Polr3a	100	91.816	Mus_musculus
ENSLOCG00000004942	polr3a	100	91.744	MGP_PahariEiJ_G0030029	Polr3a	100	91.744	Mus_pahari
ENSLOCG00000004942	polr3a	100	89.160	MGP_SPRETEiJ_G0019894	Polr3a	97	97.030	Mus_spretus
ENSLOCG00000004942	polr3a	100	91.388	ENSMPUG00000003790	POLR3A	100	91.388	Mustela_putorius_furo
ENSLOCG00000004942	polr3a	100	90.955	ENSMLUG00000011522	POLR3A	100	90.955	Myotis_lucifugus
ENSLOCG00000004942	polr3a	100	90.165	ENSNGAG00000015863	Polr3a	100	90.165	Nannospalax_galili
ENSLOCG00000004942	polr3a	100	90.596	ENSNBRG00000014262	polr3a	100	90.596	Neolamprologus_brichardi
ENSLOCG00000004942	polr3a	88	84.785	ENSNLEG00000010501	POLR3A	91	86.977	Nomascus_leucogenys
ENSLOCG00000004942	polr3a	99	79.390	ENSMEUG00000012446	POLR3A	100	79.390	Notamacropus_eugenii
ENSLOCG00000004942	polr3a	100	87.222	ENSOPRG00000001880	-	100	87.222	Ochotona_princeps
ENSLOCG00000004942	polr3a	100	91.314	ENSODEG00000015146	POLR3A	100	91.314	Octodon_degus
ENSLOCG00000004942	polr3a	100	92.606	ENSONIG00000016129	polr3a	100	92.606	Oreochromis_niloticus
ENSLOCG00000004942	polr3a	98	91.764	ENSOANG00000007013	POLR3A	100	91.764	Ornithorhynchus_anatinus
ENSLOCG00000004942	polr3a	100	91.601	ENSOCUG00000012450	POLR3A	100	91.601	Oryctolagus_cuniculus
ENSLOCG00000004942	polr3a	100	92.032	ENSORLG00000008958	polr3a	100	92.032	Oryzias_latipes
ENSLOCG00000004942	polr3a	100	89.878	ENSORLG00020007525	polr3a	98	92.565	Oryzias_latipes_hni
ENSLOCG00000004942	polr3a	100	92.032	ENSORLG00015006633	polr3a	100	92.032	Oryzias_latipes_hsok
ENSLOCG00000004942	polr3a	100	91.744	ENSOMEG00000012865	polr3a	100	91.744	Oryzias_melastigma
ENSLOCG00000004942	polr3a	100	92.103	ENSOGAG00000010995	POLR3A	100	92.103	Otolemur_garnettii
ENSLOCG00000004942	polr3a	100	91.828	ENSOARG00000009656	POLR3A	100	91.828	Ovis_aries
ENSLOCG00000004942	polr3a	100	92.175	ENSPPRG00000002128	POLR3A	100	92.175	Panthera_pardus
ENSLOCG00000004942	polr3a	100	92.175	ENSPTIG00000020916	POLR3A	100	92.175	Panthera_tigris_altaica
ENSLOCG00000004942	polr3a	100	92.103	ENSPTRG00000002664	POLR3A	98	94.937	Pan_troglodytes
ENSLOCG00000004942	polr3a	100	91.888	ENSPANG00000022508	POLR3A	98	94.937	Papio_anubis
ENSLOCG00000004942	polr3a	100	94.185	ENSPKIG00000008140	polr3a	100	94.376	Paramormyrops_kingsleyae
ENSLOCG00000004942	polr3a	98	92.493	ENSPSIG00000002092	POLR3A	100	92.493	Pelodiscus_sinensis
ENSLOCG00000004942	polr3a	100	91.601	ENSPEMG00000006768	Polr3a	100	91.601	Peromyscus_maniculatus_bairdii
ENSLOCG00000004942	polr3a	100	91.816	ENSPCIG00000015842	POLR3A	100	91.816	Phascolarctos_cinereus
ENSLOCG00000004942	polr3a	54	93.842	ENSPFOG00000006458	polr3a	100	93.842	Poecilia_formosa
ENSLOCG00000004942	polr3a	100	91.960	ENSPLAG00000000997	polr3a	100	91.960	Poecilia_latipinna
ENSLOCG00000004942	polr3a	100	91.888	ENSPMEG00000006821	polr3a	100	91.888	Poecilia_mexicana
ENSLOCG00000004942	polr3a	100	91.816	ENSPREG00000002385	polr3a	100	91.816	Poecilia_reticulata
ENSLOCG00000004942	polr3a	93	91.731	ENSPPYG00000002305	POLR3A	99	91.731	Pongo_abelii
ENSLOCG00000004942	polr3a	84	79.962	ENSPCAG00000005690	POLR3A	87	79.962	Procavia_capensis
ENSLOCG00000004942	polr3a	100	92.032	ENSPCOG00000028311	POLR3A	100	92.032	Propithecus_coquereli
ENSLOCG00000004942	polr3a	100	90.668	ENSPVAG00000015553	POLR3A	100	90.668	Pteropus_vampyrus
ENSLOCG00000004942	polr3a	100	92.319	ENSPNYG00000020987	polr3a	100	92.319	Pundamilia_nyererei
ENSLOCG00000004942	polr3a	99	89.001	ENSPNAG00000006629	polr3a	99	89.001	Pygocentrus_nattereri
ENSLOCG00000004942	polr3a	100	91.673	ENSRNOG00000010008	Polr3a	100	91.673	Rattus_norvegicus
ENSLOCG00000004942	polr3a	100	88.370	ENSRBIG00000034967	POLR3A	98	94.937	Rhinopithecus_bieti
ENSLOCG00000004942	polr3a	100	91.960	ENSRROG00000025527	POLR3A	98	94.937	Rhinopithecus_roxellana
ENSLOCG00000004942	polr3a	98	50.552	YOR116C	RPO31	99	50.552	Saccharomyces_cerevisiae
ENSLOCG00000004942	polr3a	100	92.032	ENSSBOG00000022199	POLR3A	100	92.032	Saimiri_boliviensis_boliviensis
ENSLOCG00000004942	polr3a	100	91.744	ENSSHAG00000007588	POLR3A	94	91.744	Sarcophilus_harrisii
ENSLOCG00000004942	polr3a	100	94.544	ENSSFOG00015014357	polr3a	100	94.544	Scleropages_formosus
ENSLOCG00000004942	polr3a	100	92.319	ENSSMAG00000001780	polr3a	100	92.319	Scophthalmus_maximus
ENSLOCG00000004942	polr3a	100	93.037	ENSSDUG00000019840	polr3a	100	93.037	Seriola_dumerili
ENSLOCG00000004942	polr3a	100	93.108	ENSSLDG00000023908	polr3a	100	93.108	Seriola_lalandi_dorsalis
ENSLOCG00000004942	polr3a	69	91.250	ENSSARG00000009916	POLR3A	89	91.250	Sorex_araneus
ENSLOCG00000004942	polr3a	100	90.668	ENSSPUG00000013209	POLR3A	100	90.668	Sphenodon_punctatus
ENSLOCG00000004942	polr3a	100	92.606	ENSSPAG00000017712	polr3a	100	92.606	Stegastes_partitus
ENSLOCG00000004942	polr3a	100	91.888	ENSSSCG00000010327	POLR3A	100	91.888	Sus_scrofa
ENSLOCG00000004942	polr3a	100	92.247	ENSTGUG00000006423	-	100	92.247	Taeniopygia_guttata
ENSLOCG00000004942	polr3a	100	91.888	ENSTRUG00000013488	polr3a	100	91.888	Takifugu_rubripes
ENSLOCG00000004942	polr3a	100	92.186	ENSTNIG00000013151	polr3a	100	92.186	Tetraodon_nigroviridis
ENSLOCG00000004942	polr3a	71	92.553	ENSTBEG00000015288	POLR3A	75	92.553	Tupaia_belangeri
ENSLOCG00000004942	polr3a	96	90.620	ENSTTRG00000007817	POLR3A	100	90.620	Tursiops_truncatus
ENSLOCG00000004942	polr3a	100	89.663	ENSUAMG00000011283	POLR3A	100	89.663	Ursus_americanus
ENSLOCG00000004942	polr3a	100	92.032	ENSUMAG00000013913	POLR3A	100	92.032	Ursus_maritimus
ENSLOCG00000004942	polr3a	99	84.107	ENSVPAG00000003285	POLR3A	100	84.107	Vicugna_pacos
ENSLOCG00000004942	polr3a	100	92.032	ENSVVUG00000025523	POLR3A	100	92.032	Vulpes_vulpes
ENSLOCG00000004942	polr3a	86	90.750	ENSXETG00000018101	polr3a	100	90.750	Xenopus_tropicalis
ENSLOCG00000004942	polr3a	100	91.816	ENSXMAG00000015213	polr3a	100	91.816	Xiphophorus_maculatus