EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000004945 (Gene tree)
Gene ID: 102684233
Gene Symbol: mrm1
Alias: si:dkey-189h5.1
Full Name: mitochondrial rRNA methyltransferase 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 6997 bases
Position: chrLG22:7365540-7372536
Accession: 102684233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000005947	SpoU_sub_bind	PF08032.12	4.1e-14	1	1
ENSLOCP00000005947	SpoU_methylase	PF00588.19	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000005955	-	3313	-	ENSLOCP00000005947	313 (aa)	XP_015223365	W5MC38

Gene Model

Click here to download ENSLOCG00000004945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000004945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000004945	mrm1	82	52.107	ENSG00000278619	MRM1	72	54.867	Homo_sapiens
ENSLOCG00000004945	mrm1	93	60.959	ENSAPOG00000016309	mrm1	72	60.959	Acanthochromis_polyacanthus
ENSLOCG00000004945	mrm1	82	52.490	ENSAMEG00000008301	MRM1	72	52.490	Ailuropoda_melanoleuca
ENSLOCG00000004945	mrm1	93	57.534	ENSACIG00000012244	mrm1	74	57.534	Amphilophus_citrinellus
ENSLOCG00000004945	mrm1	93	59.589	ENSAOCG00000000362	mrm1	72	59.589	Amphiprion_ocellaris
ENSLOCG00000004945	mrm1	93	59.932	ENSAPEG00000004511	mrm1	72	59.932	Amphiprion_percula
ENSLOCG00000004945	mrm1	87	55.797	ENSAPLG00000006433	MRM1	89	56.318	Anas_platyrhynchos
ENSLOCG00000004945	mrm1	95	53.667	ENSACAG00000002573	MRM1	93	53.667	Anolis_carolinensis
ENSLOCG00000004945	mrm1	82	52.107	ENSANAG00000025500	MRM1	74	52.107	Aotus_nancymaae
ENSLOCG00000004945	mrm1	90	57.447	ENSACLG00000023745	mrm1	97	58.419	Astatotilapia_calliptera
ENSLOCG00000004945	mrm1	94	54.754	ENSAMXG00000007295	mrm1	75	54.754	Astyanax_mexicanus
ENSLOCG00000004945	mrm1	94	54.754	ENSAMXG00000030596	mrm1	75	54.754	Astyanax_mexicanus
ENSLOCG00000004945	mrm1	83	52.632	ENSBTAG00000010311	MRM1	73	52.632	Bos_taurus
ENSLOCG00000004945	mrm1	82	33.708	WBGene00012864	Y45F3A.9	85	33.708	Caenorhabditis_elegans
ENSLOCG00000004945	mrm1	82	51.341	ENSCJAG00000001023	MRM1	74	51.341	Callithrix_jacchus
ENSLOCG00000004945	mrm1	85	51.673	ENSCAFG00000017849	MRM1	77	51.673	Canis_familiaris
ENSLOCG00000004945	mrm1	85	51.673	ENSCAFG00020002377	MRM1	77	51.673	Canis_lupus_dingo
ENSLOCG00000004945	mrm1	83	52.256	ENSCHIG00000008558	MRM1	73	52.256	Capra_hircus
ENSLOCG00000004945	mrm1	82	51.515	ENSTSYG00000036380	MRM1	73	51.515	Carlito_syrichta
ENSLOCG00000004945	mrm1	82	51.550	ENSCPOG00000004283	MRM1	73	51.550	Cavia_porcellus
ENSLOCG00000004945	mrm1	82	52.107	ENSCCAG00000020032	MRM1	74	52.107	Cebus_capucinus
ENSLOCG00000004945	mrm1	81	53.101	ENSCATG00000041516	MRM1	73	53.101	Cercocebus_atys
ENSLOCG00000004945	mrm1	82	51.341	ENSCLAG00000010960	MRM1	73	51.341	Chinchilla_lanigera
ENSLOCG00000004945	mrm1	81	52.326	ENSCSAG00000006055	MRM1	73	52.326	Chlorocebus_sabaeus
ENSLOCG00000004945	mrm1	89	52.330	ENSCPBG00000009581	MRM1	59	52.330	Chrysemys_picta_bellii
ENSLOCG00000004945	mrm1	56	32.796	ENSCSAVG00000002478	-	79	32.796	Ciona_savignyi
ENSLOCG00000004945	mrm1	81	52.713	ENSCANG00000025543	MRM1	73	52.713	Colobus_angolensis_palliatus
ENSLOCG00000004945	mrm1	83	53.208	ENSCGRG00001001937	Mrm1	83	53.208	Cricetulus_griseus_chok1gshd
ENSLOCG00000004945	mrm1	83	53.208	ENSCGRG00000009593	Mrm1	83	53.208	Cricetulus_griseus_crigri
ENSLOCG00000004945	mrm1	95	57.047	ENSCSEG00000014575	mrm1	79	57.047	Cynoglossus_semilaevis
ENSLOCG00000004945	mrm1	95	55.743	ENSCVAG00000012104	mrm1	75	55.743	Cyprinodon_variegatus
ENSLOCG00000004945	mrm1	63	61.111	ENSDARG00000059658	mrm1	98	61.111	Danio_rerio
ENSLOCG00000004945	mrm1	89	39.527	ENSDNOG00000035159	MRM1	81	39.527	Dasypus_novemcinctus
ENSLOCG00000004945	mrm1	69	53.425	ENSDORG00000013267	Mrm1	93	53.425	Dipodomys_ordii
ENSLOCG00000004945	mrm1	65	48.826	ENSETEG00000000378	MRM1	81	48.826	Echinops_telfairi
ENSLOCG00000004945	mrm1	85	50.923	ENSEASG00005002123	MRM1	76	50.923	Equus_asinus_asinus
ENSLOCG00000004945	mrm1	85	50.554	ENSECAG00000025139	MRM1	76	50.554	Equus_caballus
ENSLOCG00000004945	mrm1	53	47.337	ENSEEUG00000013434	-	75	47.337	Erinaceus_europaeus
ENSLOCG00000004945	mrm1	94	61.017	ENSELUG00000012392	mrm1	67	61.017	Esox_lucius
ENSLOCG00000004945	mrm1	94	46.078	ENSFCAG00000031667	MRM1	85	46.078	Felis_catus
ENSLOCG00000004945	mrm1	51	61.635	ENSFALG00000005294	MRM1	99	61.635	Ficedula_albicollis
ENSLOCG00000004945	mrm1	69	53.571	ENSFDAG00000018545	MRM1	74	53.571	Fukomys_damarensis
ENSLOCG00000004945	mrm1	94	53.741	ENSFHEG00000005529	mrm1	80	54.333	Fundulus_heteroclitus
ENSLOCG00000004945	mrm1	79	56.800	ENSGALG00000039523	MRM1	98	56.800	Gallus_gallus
ENSLOCG00000004945	mrm1	95	56.757	ENSGAFG00000012959	mrm1	78	56.757	Gambusia_affinis
ENSLOCG00000004945	mrm1	82	63.707	ENSGACG00000004024	mrm1	96	63.707	Gasterosteus_aculeatus
ENSLOCG00000004945	mrm1	93	52.397	ENSGAGG00000000908	MRM1	71	52.397	Gopherus_agassizii
ENSLOCG00000004945	mrm1	82	52.490	ENSGGOG00000007979	MRM1	74	52.490	Gorilla_gorilla
ENSLOCG00000004945	mrm1	90	57.447	ENSHBUG00000004484	mrm1	97	58.419	Haplochromis_burtoni
ENSLOCG00000004945	mrm1	82	50.758	ENSHGLG00000008701	MRM1	74	50.758	Heterocephalus_glaber_female
ENSLOCG00000004945	mrm1	69	52.679	ENSHGLG00100012646	MRM1	74	52.679	Heterocephalus_glaber_male
ENSLOCG00000004945	mrm1	93	57.679	ENSHCOG00000003665	mrm1	81	57.679	Hippocampus_comes
ENSLOCG00000004945	mrm1	98	51.111	ENSIPUG00000022357	mrm1	81	52.366	Ictalurus_punctatus
ENSLOCG00000004945	mrm1	83	51.515	ENSSTOG00000002422	MRM1	79	51.515	Ictidomys_tridecemlineatus
ENSLOCG00000004945	mrm1	82	49.810	ENSJJAG00000010068	Mrm1	87	49.810	Jaculus_jaculus
ENSLOCG00000004945	mrm1	94	56.271	ENSLBEG00000009581	mrm1	98	56.271	Labrus_bergylta
ENSLOCG00000004945	mrm1	93	50.342	ENSLACG00000017664	MRM1	99	51.027	Latimeria_chalumnae
ENSLOCG00000004945	mrm1	82	52.874	ENSLAFG00000012584	MRM1	79	52.874	Loxodonta_africana
ENSLOCG00000004945	mrm1	81	52.713	ENSMFAG00000032112	MRM1	73	52.713	Macaca_fascicularis
ENSLOCG00000004945	mrm1	81	52.713	ENSMMUG00000000622	MRM1	75	52.713	Macaca_mulatta
ENSLOCG00000004945	mrm1	81	53.101	ENSMNEG00000044557	MRM1	73	53.101	Macaca_nemestrina
ENSLOCG00000004945	mrm1	81	52.713	ENSMLEG00000031933	MRM1	73	52.713	Mandrillus_leucophaeus
ENSLOCG00000004945	mrm1	90	57.746	ENSMAMG00000007018	mrm1	97	58.249	Mastacembelus_armatus
ENSLOCG00000004945	mrm1	90	57.092	ENSMZEG00005008320	mrm1	97	58.076	Maylandia_zebra
ENSLOCG00000004945	mrm1	83	51.894	ENSMAUG00000020976	Mrm1	83	51.894	Mesocricetus_auratus
ENSLOCG00000004945	mrm1	83	52.273	ENSMICG00000004216	MRM1	79	52.273	Microcebus_murinus
ENSLOCG00000004945	mrm1	92	59.386	ENSMMOG00000001468	mrm1	87	59.386	Mola_mola
ENSLOCG00000004945	mrm1	91	49.508	ENSMODG00000003307	MRM1	72	49.508	Monodelphis_domestica
ENSLOCG00000004945	mrm1	91	59.649	ENSMALG00000014364	mrm1	93	60.274	Monopterus_albus
ENSLOCG00000004945	mrm1	84	51.685	MGP_CAROLIEiJ_G0016896	Mrm1	83	51.685	Mus_caroli
ENSLOCG00000004945	mrm1	84	51.685	ENSMUSG00000018405	Mrm1	83	51.685	Mus_musculus
ENSLOCG00000004945	mrm1	84	51.685	MGP_PahariEiJ_G0018026	Mrm1	83	51.685	Mus_pahari
ENSLOCG00000004945	mrm1	84	51.685	MGP_SPRETEiJ_G0017741	Mrm1	83	51.685	Mus_spretus
ENSLOCG00000004945	mrm1	85	49.815	ENSMPUG00000015063	MRM1	75	49.815	Mustela_putorius_furo
ENSLOCG00000004945	mrm1	88	51.439	ENSMLUG00000013208	MRM1	78	51.439	Myotis_lucifugus
ENSLOCG00000004945	mrm1	84	50.562	ENSNGAG00000019175	Mrm1	81	50.562	Nannospalax_galili
ENSLOCG00000004945	mrm1	90	57.092	ENSNBRG00000023533	mrm1	97	58.076	Neolamprologus_brichardi
ENSLOCG00000004945	mrm1	82	52.107	ENSNLEG00000002300	MRM1	73	52.107	Nomascus_leucogenys
ENSLOCG00000004945	mrm1	82	52.490	ENSOPRG00000012866	MRM1	75	52.490	Ochotona_princeps
ENSLOCG00000004945	mrm1	90	57.651	ENSONIG00000021236	mrm1	99	58.621	Oreochromis_niloticus
ENSLOCG00000004945	mrm1	82	50.192	ENSOCUG00000012149	MRM1	72	49.042	Oryctolagus_cuniculus
ENSLOCG00000004945	mrm1	94	58.644	ENSORLG00000025876	mrm1	96	58.644	Oryzias_latipes
ENSLOCG00000004945	mrm1	93	58.419	ENSORLG00020021701	mrm1	94	58.419	Oryzias_latipes_hni
ENSLOCG00000004945	mrm1	93	58.419	ENSORLG00015020702	mrm1	94	58.419	Oryzias_latipes_hsok
ENSLOCG00000004945	mrm1	94	57.966	ENSOMEG00000003504	mrm1	96	57.966	Oryzias_melastigma
ENSLOCG00000004945	mrm1	84	51.852	ENSOGAG00000013785	MRM1	84	51.852	Otolemur_garnettii
ENSLOCG00000004945	mrm1	83	52.060	ENSOARG00000018616	MRM1	73	52.060	Ovis_aries
ENSLOCG00000004945	mrm1	82	52.107	ENSPPAG00000043135	MRM1	74	52.107	Pan_paniscus
ENSLOCG00000004945	mrm1	94	46.732	ENSPPRG00000023620	MRM1	85	46.732	Panthera_pardus
ENSLOCG00000004945	mrm1	81	50.193	ENSPTIG00000009829	MRM1	90	50.193	Panthera_tigris_altaica
ENSLOCG00000004945	mrm1	82	52.107	ENSPTRG00000009049	MRM1	73	52.107	Pan_troglodytes
ENSLOCG00000004945	mrm1	81	53.101	ENSPANG00000022126	MRM1	73	53.101	Papio_anubis
ENSLOCG00000004945	mrm1	93	58.703	ENSPKIG00000007654	mrm1	78	58.703	Paramormyrops_kingsleyae
ENSLOCG00000004945	mrm1	88	51.254	ENSPSIG00000017622	MRM1	99	51.254	Pelodiscus_sinensis
ENSLOCG00000004945	mrm1	93	51.877	ENSPMGG00000003905	mrm1	87	51.877	Periophthalmus_magnuspinnatus
ENSLOCG00000004945	mrm1	66	41.553	ENSPMAG00000000484	mrm1	100	41.553	Petromyzon_marinus
ENSLOCG00000004945	mrm1	89	49.324	ENSPCIG00000003352	MRM1	77	49.662	Phascolarctos_cinereus
ENSLOCG00000004945	mrm1	95	51.351	ENSPFOG00000018234	mrm1	71	51.351	Poecilia_formosa
ENSLOCG00000004945	mrm1	95	56.757	ENSPLAG00000020759	mrm1	73	56.757	Poecilia_latipinna
ENSLOCG00000004945	mrm1	95	56.757	ENSPMEG00000021744	mrm1	73	56.757	Poecilia_mexicana
ENSLOCG00000004945	mrm1	95	56.376	ENSPREG00000013224	mrm1	80	56.376	Poecilia_reticulata
ENSLOCG00000004945	mrm1	98	41.613	ENSPCAG00000011756	MRM1	86	41.613	Procavia_capensis
ENSLOCG00000004945	mrm1	83	51.894	ENSPCOG00000020871	MRM1	79	51.894	Propithecus_coquereli
ENSLOCG00000004945	mrm1	85	42.751	ENSPVAG00000011626	MRM1	75	42.751	Pteropus_vampyrus
ENSLOCG00000004945	mrm1	90	57.092	ENSPNYG00000000528	mrm1	97	58.076	Pundamilia_nyererei
ENSLOCG00000004945	mrm1	94	56.811	ENSPNAG00000014551	mrm1	74	56.811	Pygocentrus_nattereri
ENSLOCG00000004945	mrm1	84	51.311	ENSRNOG00000027901	Mrm1	83	51.311	Rattus_norvegicus
ENSLOCG00000004945	mrm1	81	53.101	ENSRBIG00000040494	MRM1	73	53.101	Rhinopithecus_bieti
ENSLOCG00000004945	mrm1	81	53.101	ENSRROG00000041704	MRM1	73	53.101	Rhinopithecus_roxellana
ENSLOCG00000004945	mrm1	67	32.806	YOR201C	MRM1	60	32.806	Saccharomyces_cerevisiae
ENSLOCG00000004945	mrm1	82	50.575	ENSSBOG00000024145	MRM1	74	50.575	Saimiri_boliviensis_boliviensis
ENSLOCG00000004945	mrm1	98	57.003	ENSSFOG00015022117	mrm1	77	57.003	Scleropages_formosus
ENSLOCG00000004945	mrm1	93	58.983	ENSSMAG00000009657	mrm1	95	58.983	Scophthalmus_maximus
ENSLOCG00000004945	mrm1	94	61.953	ENSSDUG00000009089	mrm1	75	61.953	Seriola_dumerili
ENSLOCG00000004945	mrm1	94	61.356	ENSSLDG00000024141	mrm1	84	61.356	Seriola_lalandi_dorsalis
ENSLOCG00000004945	mrm1	93	51.020	ENSSPUG00000000265	MRM1	75	51.020	Sphenodon_punctatus
ENSLOCG00000004945	mrm1	80	50.593	ENSSSCG00000017691	MRM1	69	50.593	Sus_scrofa
ENSLOCG00000004945	mrm1	62	60.000	ENSTGUG00000008048	MRM1	99	60.000	Taeniopygia_guttata
ENSLOCG00000004945	mrm1	94	58.844	ENSTRUG00000011737	mrm1	78	58.844	Takifugu_rubripes
ENSLOCG00000004945	mrm1	95	56.081	ENSTNIG00000010088	mrm1	81	56.081	Tetraodon_nigroviridis
ENSLOCG00000004945	mrm1	53	46.746	ENSTBEG00000007237	-	77	46.746	Tupaia_belangeri
ENSLOCG00000004945	mrm1	85	47.426	ENSTTRG00000011984	MRM1	75	47.426	Tursiops_truncatus
ENSLOCG00000004945	mrm1	79	58.974	ENSUAMG00000023152	MRM1	79	51.200	Ursus_americanus
ENSLOCG00000004945	mrm1	85	50.554	ENSVVUG00000018420	MRM1	65	50.554	Vulpes_vulpes
ENSLOCG00000004945	mrm1	92	56.747	ENSXCOG00000003622	mrm1	79	56.747	Xiphophorus_couchianus
ENSLOCG00000004945	mrm1	95	56.757	ENSXMAG00000014890	mrm1	78	56.757	Xiphophorus_maculatus