EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLOCG00000005020 (Gene tree)
Gene ID
102682735
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Lepisosteus_oculatus
Status
putative
Strand
Minus strand
Length
11593 bases
Position
chrLG18:10353750-10365342
Accession
102682735
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLOCP00000006044YTHPF04146.154e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLOCT00000006052-1743XM_006639596ENSLOCP00000006044580 (aa)XP_006639659W5MCD5
Gene Model
Click here to download ENSLOCG00000005020's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005020's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLOCG00000005020ythdf19560.972ENSLOCG00000005362ythdf210059.936
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLOCG00000005020ythdf19578.545ENSG00000149658YTHDF110076.207Homo_sapiens
ENSLOCG00000005020ythdf110078.387ENSAPOG00000010796YTHDF110078.871Acanthochromis_polyacanthus
ENSLOCG00000005020ythdf19973.558ENSAPOG00000004358ythdf19877.241Acanthochromis_polyacanthus
ENSLOCG00000005020ythdf19378.782ENSAMEG00000017323YTHDF19877.661Ailuropoda_melanoleuca
ENSLOCG00000005020ythdf19478.863ENSACIG00000020083YTHDF110076.238Amphilophus_citrinellus
ENSLOCG00000005020ythdf19474.690ENSACIG00000011264ythdf19875.043Amphilophus_citrinellus
ENSLOCG00000005020ythdf110078.387ENSAOCG00000012567YTHDF110078.710Amphiprion_ocellaris
ENSLOCG00000005020ythdf19973.333ENSAOCG00000022251ythdf19877.083Amphiprion_ocellaris
ENSLOCG00000005020ythdf19973.333ENSAPEG00000021878ythdf19974.677Amphiprion_percula
ENSLOCG00000005020ythdf110078.548ENSAPEG00000008750YTHDF110078.871Amphiprion_percula
ENSLOCG00000005020ythdf19973.718ENSATEG00000023840ythdf19976.042Anabas_testudineus
ENSLOCG00000005020ythdf110078.422ENSATEG00000005996YTHDF110079.066Anabas_testudineus
ENSLOCG00000005020ythdf19380.407ENSAPLG00000005985YTHDF19979.581Anas_platyrhynchos
ENSLOCG00000005020ythdf19582.182ENSACAG00000005560YTHDF110080.034Anolis_carolinensis
ENSLOCG00000005020ythdf19577.231ENSANAG00000034786-10075.690Aotus_nancymaae
ENSLOCG00000005020ythdf110064.828ENSANAG00000021022-10064.483Aotus_nancymaae
ENSLOCG00000005020ythdf110078.191ENSACLG00000025518YTHDF110078.514Astatotilapia_calliptera
ENSLOCG00000005020ythdf19478.205ENSBTAG00000010383YTHDF110076.420Bos_taurus
ENSLOCG00000005020ythdf19577.596ENSCJAG00000010056YTHDF110076.034Callithrix_jacchus
ENSLOCG00000005020ythdf18677.600ENSCAFG00000012772YTHDF19976.226Canis_familiaris
ENSLOCG00000005020ythdf18677.600ENSCAFG00020001214YTHDF19976.226Canis_lupus_dingo
ENSLOCG00000005020ythdf19477.839ENSCHIG00000026494YTHDF110076.076Capra_hircus
ENSLOCG00000005020ythdf19476.417ENSTSYG00000033436YTHDF19975.606Carlito_syrichta
ENSLOCG00000005020ythdf19376.980ENSCAPG00000002544YTHDF19276.980Cavia_aperea
ENSLOCG00000005020ythdf19577.413ENSCPOG00000010202YTHDF110075.862Cavia_porcellus
ENSLOCG00000005020ythdf19677.558ENSCCAG00000024650YTHDF110076.034Cebus_capucinus
ENSLOCG00000005020ythdf19578.324ENSCATG00000033272YTHDF110076.724Cercocebus_atys
ENSLOCG00000005020ythdf19579.091ENSCLAG00000005989YTHDF110077.281Chinchilla_lanigera
ENSLOCG00000005020ythdf19578.324ENSCSAG00000016266YTHDF110076.724Chlorocebus_sabaeus
ENSLOCG00000005020ythdf19581.374ENSCPBG00000027183YTHDF110079.483Chrysemys_picta_bellii
ENSLOCG00000005020ythdf19378.189ENSCANG00000029082YTHDF19876.573Colobus_angolensis_palliatus
ENSLOCG00000005020ythdf19778.622ENSCGRG00001016568Ythdf110078.141Cricetulus_griseus_chok1gshd
ENSLOCG00000005020ythdf19379.113ENSCGRG00000009207Ythdf110077.972Cricetulus_griseus_crigri
ENSLOCG00000005020ythdf19476.619ENSCSEG00000020623YTHDF19977.113Cynoglossus_semilaevis
ENSLOCG00000005020ythdf110077.456ENSCVAG00000014378YTHDF110079.126Cyprinodon_variegatus
ENSLOCG00000005020ythdf19970.947ENSCVAG00000017940ythdf19872.997Cyprinodon_variegatus
ENSLOCG00000005020ythdf110078.029ENSDARG00000016447ythdf110078.339Danio_rerio
ENSLOCG00000005020ythdf19579.167ENSDNOG00000043590YTHDF110077.055Dasypus_novemcinctus
ENSLOCG00000005020ythdf19277.298ENSDORG00000002879Ythdf19476.418Dipodomys_ordii
ENSLOCG00000005020ythdf17762.821ENSETEG00000017860-10062.821Echinops_telfairi
ENSLOCG00000005020ythdf19679.211ENSEASG00005023186YTHDF110077.453Equus_asinus_asinus
ENSLOCG00000005020ythdf19678.995ENSECAG00000019475YTHDF110076.648Equus_caballus
ENSLOCG00000005020ythdf18777.075ENSEEUG00000007461YTHDF110075.933Erinaceus_europaeus
ENSLOCG00000005020ythdf19972.360ENSELUG00000001906YTHDF19974.468Esox_lucius
ENSLOCG00000005020ythdf19974.525ENSELUG00000022768ythdf19976.490Esox_lucius
ENSLOCG00000005020ythdf19478.205ENSFCAG00000008917YTHDF110077.108Felis_catus
ENSLOCG00000005020ythdf19581.785ENSFALG00000010463YTHDF110080.000Ficedula_albicollis
ENSLOCG00000005020ythdf19578.142ENSFDAG00000019602YTHDF110076.420Fukomys_damarensis
ENSLOCG00000005020ythdf110076.923ENSFHEG00000002540YTHDF110077.778Fundulus_heteroclitus
ENSLOCG00000005020ythdf19972.303ENSFHEG00000023218ythdf19974.520Fundulus_heteroclitus
ENSLOCG00000005020ythdf19972.150ENSGMOG00000019610ythdf18291.388Gadus_morhua
ENSLOCG00000005020ythdf19580.328ENSGALG00000005745YTHDF110079.518Gallus_gallus
ENSLOCG00000005020ythdf110077.581ENSGAFG00000021100YTHDF110078.065Gambusia_affinis
ENSLOCG00000005020ythdf110076.403ENSGACG00000002613YTHDF110076.403Gasterosteus_aculeatus
ENSLOCG00000005020ythdf19974.304ENSGACG00000012014ythdf19974.338Gasterosteus_aculeatus
ENSLOCG00000005020ythdf19581.736ENSGAGG00000003007YTHDF110079.828Gopherus_agassizii
ENSLOCG00000005020ythdf19579.091ENSGGOG00000008340YTHDF110076.552Gorilla_gorilla
ENSLOCG00000005020ythdf110078.514ENSHBUG00000004875YTHDF110078.837Haplochromis_burtoni
ENSLOCG00000005020ythdf19974.104ENSHBUG00000011284ythdf19975.731Haplochromis_burtoni
ENSLOCG00000005020ythdf19578.142ENSHGLG00000006585YTHDF110076.068Heterocephalus_glaber_female
ENSLOCG00000005020ythdf19578.142ENSHGLG00100004683YTHDF110076.068Heterocephalus_glaber_male
ENSLOCG00000005020ythdf110075.890ENSHCOG00000011303YTHDF110076.861Hippocampus_comes
ENSLOCG00000005020ythdf19672.982ENSHCOG00000008866ythdf19972.727Hippocampus_comes
ENSLOCG00000005020ythdf110076.710ENSIPUG00000000425Ythdf110076.797Ictalurus_punctatus
ENSLOCG00000005020ythdf19378.004ENSSTOG00000023001YTHDF19976.748Ictidomys_tridecemlineatus
ENSLOCG00000005020ythdf19379.074ENSJJAG00000013589Ythdf110077.058Jaculus_jaculus
ENSLOCG00000005020ythdf110077.778ENSKMAG00000017472YTHDF110078.768Kryptolebias_marmoratus
ENSLOCG00000005020ythdf19973.355ENSKMAG00000005595ythdf19974.386Kryptolebias_marmoratus
ENSLOCG00000005020ythdf110077.331ENSLBEG00000012068YTHDF110077.742Labrus_bergylta
ENSLOCG00000005020ythdf19973.034ENSLBEG00000014105ythdf19974.020Labrus_bergylta
ENSLOCG00000005020ythdf19380.258ENSLACG00000014195YTHDF19880.917Latimeria_chalumnae
ENSLOCG00000005020ythdf19580.289ENSLAFG00000008884YTHDF110077.530Loxodonta_africana
ENSLOCG00000005020ythdf19578.324ENSMFAG00000042868YTHDF110076.724Macaca_fascicularis
ENSLOCG00000005020ythdf19578.324ENSMMUG00000009227YTHDF110076.724Macaca_mulatta
ENSLOCG00000005020ythdf19578.324ENSMNEG00000030851YTHDF110076.724Macaca_nemestrina
ENSLOCG00000005020ythdf19578.689ENSMLEG00000009252YTHDF110076.708Mandrillus_leucophaeus
ENSLOCG00000005020ythdf19974.468ENSMAMG00000024255ythdf19975.652Mastacembelus_armatus
ENSLOCG00000005020ythdf110078.422ENSMAMG00000011072YTHDF110078.583Mastacembelus_armatus
ENSLOCG00000005020ythdf110078.514ENSMZEG00005023596YTHDF110078.837Maylandia_zebra
ENSLOCG00000005020ythdf19974.309ENSMZEG00005026397ythdf19976.923Maylandia_zebra
ENSLOCG00000005020ythdf19479.342ENSMGAG00000006139YTHDF19979.407Meleagris_gallopavo
ENSLOCG00000005020ythdf19578.871ENSMAUG00000017660Ythdf110077.759Mesocricetus_auratus
ENSLOCG00000005020ythdf19578.182ENSMICG00000032266YTHDF110076.592Microcebus_murinus
ENSLOCG00000005020ythdf19578.506ENSMOCG00000013573Ythdf110077.414Microtus_ochrogaster
ENSLOCG00000005020ythdf19977.524ENSMMOG00000020467YTHDF19978.176Mola_mola
ENSLOCG00000005020ythdf19473.070ENSMMOG00000017500ythdf19773.411Mola_mola
ENSLOCG00000005020ythdf18680.318ENSMODG00000016842YTHDF110079.323Monodelphis_domestica
ENSLOCG00000005020ythdf19972.134ENSMALG00000015672ythdf19974.536Monopterus_albus
ENSLOCG00000005020ythdf110077.922ENSMALG00000022209YTHDF110078.247Monopterus_albus
ENSLOCG00000005020ythdf19578.142MGP_CAROLIEiJ_G0024790Ythdf110077.069Mus_caroli
ENSLOCG00000005020ythdf19578.142ENSMUSG00000038848Ythdf110077.069Mus_musculus
ENSLOCG00000005020ythdf19577.778MGP_PahariEiJ_G0026237Ythdf110076.724Mus_pahari
ENSLOCG00000005020ythdf19578.142MGP_SPRETEiJ_G0025715Ythdf110077.069Mus_spretus
ENSLOCG00000005020ythdf18675.600ENSMPUG00000008111YTHDF110074.060Mustela_putorius_furo
ENSLOCG00000005020ythdf19279.478ENSMLUG00000002241YTHDF19677.601Myotis_lucifugus
ENSLOCG00000005020ythdf19578.871ENSNGAG00000000334Ythdf110077.759Nannospalax_galili
ENSLOCG00000005020ythdf19477.996ENSNBRG00000015321YTHDF19978.559Neolamprologus_brichardi
ENSLOCG00000005020ythdf19674.301ENSNBRG00000008213ythdf19974.007Neolamprologus_brichardi
ENSLOCG00000005020ythdf19371.747ENSOPRG00000001758-9972.067Ochotona_princeps
ENSLOCG00000005020ythdf19577.413ENSODEG00000004380-10076.936Octodon_degus
ENSLOCG00000005020ythdf19463.853ENSODEG00000000074-10063.339Octodon_degus
ENSLOCG00000005020ythdf19474.188ENSONIG00000016799ythdf19975.340Oreochromis_niloticus
ENSLOCG00000005020ythdf19580.874ENSOANG00000003723YTHDF110080.308Ornithorhynchus_anatinus
ENSLOCG00000005020ythdf110077.273ENSORLG00000009739YTHDF110078.571Oryzias_latipes
ENSLOCG00000005020ythdf19973.026ENSORLG00000014665YTHDF19972.504Oryzias_latipes
ENSLOCG00000005020ythdf110077.997ENSORLG00020001332YTHDF110078.956Oryzias_latipes_hni
ENSLOCG00000005020ythdf19973.476ENSORLG00020000307ythdf19972.951Oryzias_latipes_hni
ENSLOCG00000005020ythdf110077.273ENSORLG00015018321YTHDF110078.571Oryzias_latipes_hsok
ENSLOCG00000005020ythdf19973.311ENSORLG00015006302ythdf19972.787Oryzias_latipes_hsok
ENSLOCG00000005020ythdf19974.338ENSOMEG00000002941YTHDF19976.232Oryzias_melastigma
ENSLOCG00000005020ythdf110078.537ENSOMEG00000011843YTHDF110078.699Oryzias_melastigma
ENSLOCG00000005020ythdf19577.273ENSOGAG00000000480YTHDF110076.976Otolemur_garnettii
ENSLOCG00000005020ythdf19376.766ENSOARG00000011639YTHDF19874.042Ovis_aries
ENSLOCG00000005020ythdf19579.091ENSPPAG00000023277YTHDF110076.573Pan_paniscus
ENSLOCG00000005020ythdf19478.532ENSPPRG00000020805YTHDF110077.414Panthera_pardus
ENSLOCG00000005020ythdf17984.959ENSPTIG00000017355YTHDF19684.677Panthera_tigris_altaica
ENSLOCG00000005020ythdf19579.091ENSPTRG00000013730YTHDF110076.552Pan_troglodytes
ENSLOCG00000005020ythdf19578.324ENSPANG00000021472YTHDF110076.724Papio_anubis
ENSLOCG00000005020ythdf19972.819ENSPKIG00000005427ythdf110071.786Paramormyrops_kingsleyae
ENSLOCG00000005020ythdf19774.956ENSPKIG00000005026YTHDF19974.216Paramormyrops_kingsleyae
ENSLOCG00000005020ythdf19580.797ENSPSIG00000005529YTHDF19881.374Pelodiscus_sinensis
ENSLOCG00000005020ythdf19177.265ENSPMGG00000009101YTHDF19976.628Periophthalmus_magnuspinnatus
ENSLOCG00000005020ythdf19175.136ENSPMGG00000015328ythdf19776.377Periophthalmus_magnuspinnatus
ENSLOCG00000005020ythdf19379.113ENSPEMG00000020199Ythdf19979.667Peromyscus_maniculatus_bairdii
ENSLOCG00000005020ythdf19780.179ENSPCIG00000017170YTHDF110079.699Phascolarctos_cinereus
ENSLOCG00000005020ythdf19974.092ENSPFOG00000005405ythdf19972.488Poecilia_formosa
ENSLOCG00000005020ythdf19974.092ENSPLAG00000006653ythdf19974.216Poecilia_latipinna
ENSLOCG00000005020ythdf110077.581ENSPLAG00000006298YTHDF110078.065Poecilia_latipinna
ENSLOCG00000005020ythdf19972.033ENSPMEG00000023753ythdf19973.913Poecilia_mexicana
ENSLOCG00000005020ythdf110077.581ENSPMEG00000020969-10078.065Poecilia_mexicana
ENSLOCG00000005020ythdf19777.409ENSPREG00000017662YTHDF19878.073Poecilia_reticulata
ENSLOCG00000005020ythdf19675.524ENSPREG00000002173ythdf19974.216Poecilia_reticulata
ENSLOCG00000005020ythdf17991.758ENSPPYG00000011226YTHDF19985.446Pongo_abelii
ENSLOCG00000005020ythdf18675.149ENSPCAG00000002452YTHDF110074.464Procavia_capensis
ENSLOCG00000005020ythdf19578.909ENSPCOG00000025969YTHDF110077.281Propithecus_coquereli
ENSLOCG00000005020ythdf19673.153ENSPVAG00000017568YTHDF19974.054Pteropus_vampyrus
ENSLOCG00000005020ythdf110078.514ENSPNYG00000002266YTHDF110078.837Pundamilia_nyererei
ENSLOCG00000005020ythdf19974.104ENSPNYG00000014007ythdf19976.923Pundamilia_nyererei
ENSLOCG00000005020ythdf110079.092ENSPNAG00000012447ythdf110079.024Pygocentrus_nattereri
ENSLOCG00000005020ythdf19578.324ENSRNOG00000027015Ythdf110077.241Rattus_norvegicus
ENSLOCG00000005020ythdf19577.231ENSRBIG00000044959YTHDF110075.690Rhinopithecus_bieti
ENSLOCG00000005020ythdf19577.231ENSRROG00000033014YTHDF110075.690Rhinopithecus_roxellana
ENSLOCG00000005020ythdf19276.504ENSSBOG00000027278YTHDF110073.962Saimiri_boliviensis_boliviensis
ENSLOCG00000005020ythdf19480.073ENSSHAG00000010430YTHDF18980.000Sarcophilus_harrisii
ENSLOCG00000005020ythdf110082.034ENSSFOG00015000284ythdf110081.695Scleropages_formosus
ENSLOCG00000005020ythdf19977.889ENSSMAG00000007635YTHDF19878.716Scophthalmus_maximus
ENSLOCG00000005020ythdf17089.404ENSSMAG00000013715ythdf19180.000Scophthalmus_maximus
ENSLOCG00000005020ythdf110075.663ENSSDUG00000015823YTHDF110076.766Seriola_dumerili
ENSLOCG00000005020ythdf19973.726ENSSDUG00000000435ythdf19876.910Seriola_dumerili
ENSLOCG00000005020ythdf110076.378ENSSLDG00000001054YTHDF110077.496Seriola_lalandi_dorsalis
ENSLOCG00000005020ythdf19973.871ENSSLDG00000024948ythdf19974.056Seriola_lalandi_dorsalis
ENSLOCG00000005020ythdf18681.162ENSSPUG00000015143YTHDF110079.550Sphenodon_punctatus
ENSLOCG00000005020ythdf110078.100ENSSPAG00000003666YTHDF110078.261Stegastes_partitus
ENSLOCG00000005020ythdf19972.240ENSSPAG00000014989ythdf19973.794Stegastes_partitus
ENSLOCG00000005020ythdf19575.862ENSSSCG00000040086YTHDF110075.773Sus_scrofa
ENSLOCG00000005020ythdf19380.591ENSTGUG00000007565YTHDF110079.756Taeniopygia_guttata
ENSLOCG00000005020ythdf19474.915ENSTRUG00000004288ythdf19975.465Takifugu_rubripes
ENSLOCG00000005020ythdf19775.828ENSTRUG00000005049YTHDF110076.490Takifugu_rubripes
ENSLOCG00000005020ythdf19475.271ENSTNIG00000012490ythdf19975.265Tetraodon_nigroviridis
ENSLOCG00000005020ythdf19476.029ENSTNIG00000003975YTHDF110073.737Tetraodon_nigroviridis
ENSLOCG00000005020ythdf19675.714ENSTTRG00000001804YTHDF19976.964Tursiops_truncatus
ENSLOCG00000005020ythdf19278.799ENSUAMG00000011021YTHDF110076.648Ursus_americanus
ENSLOCG00000005020ythdf18677.600ENSUMAG00000022290YTHDF110076.460Ursus_maritimus
ENSLOCG00000005020ythdf18677.600ENSVVUG00000015275YTHDF19976.226Vulpes_vulpes
ENSLOCG00000005020ythdf19481.536ENSXETG00000027086ythdf19681.159Xenopus_tropicalis
ENSLOCG00000005020ythdf19376.396ENSXCOG00000002490ythdf19475.045Xiphophorus_couchianus
ENSLOCG00000005020ythdf19776.694ENSXCOG00000008115YTHDF19977.190Xiphophorus_couchianus
ENSLOCG00000005020ythdf19972.594ENSXMAG00000008525ythdf19975.482Xiphophorus_maculatus
ENSLOCG00000005020ythdf110077.258ENSXMAG00000015644YTHDF110077.742Xiphophorus_maculatus

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