EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005058 (Gene tree)
Gene ID: 102683535
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 224826 bases
Position: chrLG11:14279271-14504096
Accession: 102683535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006105	KH_1	PF00013.29	5.3e-55	1	3
ENSLOCP00000006105	KH_1	PF00013.29	5.3e-55	2	3
ENSLOCP00000006105	KH_1	PF00013.29	5.3e-55	3	3
ENSLOCP00000006090	KH_1	PF00013.29	1e-54	1	3
ENSLOCP00000006090	KH_1	PF00013.29	1e-54	2	3
ENSLOCP00000006090	KH_1	PF00013.29	1e-54	3	3
ENSLOCP00000006105	KH_2	PF07650.17	2.3e-16	1	1
ENSLOCP00000006090	KH_2	PF07650.17	6.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006113	-	1418	-	ENSLOCP00000006105	409 (aa)	XP_015212752	W5MCJ6
ENSLOCT00000006098	-	1776	XM_006635705	ENSLOCP00000006090	474 (aa)	-	W5MCI1

Gene Model

Click here to download ENSLOCG00000005058's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005058's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005058	zgc:110045	81	87.613	ENSLOCG00000009369	pcbp3	97	87.613
ENSLOCG00000005058	zgc:110045	79	35.075	ENSLOCG00000009564	igf2bp2b	60	35.338
ENSLOCG00000005058	zgc:110045	51	37.879	ENSLOCG00000006229	khsrp	55	37.879
ENSLOCG00000005058	zgc:110045	79	34.307	ENSLOCG00000013497	igf2bp1	57	34.307
ENSLOCG00000005058	zgc:110045	73	40.351	ENSLOCG00000009727	NOVA1	94	33.721
ENSLOCG00000005058	zgc:110045	80	76.829	ENSLOCG00000005598	pcbp2	99	59.343
ENSLOCG00000005058	zgc:110045	61	47.945	ENSLOCG00000002262	hnrpkl	58	46.667
ENSLOCG00000005058	zgc:110045	100	57.708	ENSLOCG00000013402	pcbp4	98	57.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005058	zgc:110045	80	83.486	ENSAPOG00000016582	-	93	83.486	Acanthochromis_polyacanthus
ENSLOCG00000005058	zgc:110045	79	80.308	ENSAPOG00000020003	pcbp3	84	80.308	Acanthochromis_polyacanthus
ENSLOCG00000005058	zgc:110045	81	83.871	ENSAMEG00000001697	-	97	83.871	Ailuropoda_melanoleuca
ENSLOCG00000005058	zgc:110045	80	81.651	ENSACIG00000002739	-	95	81.651	Amphilophus_citrinellus
ENSLOCG00000005058	zgc:110045	80	83.486	ENSACIG00000010933	pcbp3	93	83.486	Amphilophus_citrinellus
ENSLOCG00000005058	zgc:110045	78	78.361	ENSAOCG00000007806	-	97	78.361	Amphiprion_ocellaris
ENSLOCG00000005058	zgc:110045	79	82.769	ENSAOCG00000008592	-	95	82.769	Amphiprion_ocellaris
ENSLOCG00000005058	zgc:110045	80	81.346	ENSAPEG00000005209	-	95	81.346	Amphiprion_percula
ENSLOCG00000005058	zgc:110045	80	85.714	ENSAPEG00000008011	pcbp3	93	85.714	Amphiprion_percula
ENSLOCG00000005058	zgc:110045	79	84.000	ENSATEG00000015787	-	98	84.000	Anabas_testudineus
ENSLOCG00000005058	zgc:110045	80	80.734	ENSATEG00000009833	-	95	80.734	Anabas_testudineus
ENSLOCG00000005058	zgc:110045	81	80.870	ENSAPLG00000002975	-	97	80.870	Anas_platyrhynchos
ENSLOCG00000005058	zgc:110045	100	85.325	ENSAPLG00000008951	-	100	84.265	Anas_platyrhynchos
ENSLOCG00000005058	zgc:110045	81	82.906	ENSACAG00000004607	-	97	82.906	Anolis_carolinensis
ENSLOCG00000005058	zgc:110045	82	94.012	ENSACAG00000009819	-	96	93.958	Anolis_carolinensis
ENSLOCG00000005058	zgc:110045	78	80.876	ENSANAG00000030702	-	96	80.876	Aotus_nancymaae
ENSLOCG00000005058	zgc:110045	80	83.486	ENSACLG00000003801	-	95	83.180	Astatotilapia_calliptera
ENSLOCG00000005058	zgc:110045	80	85.410	ENSACLG00000011835	pcbp3	93	85.410	Astatotilapia_calliptera
ENSLOCG00000005058	zgc:110045	79	79.938	ENSAMXG00000013588	-	97	79.938	Astyanax_mexicanus
ENSLOCG00000005058	zgc:110045	100	67.152	ENSAMXG00000001760	zgc:110045	100	65.762	Astyanax_mexicanus
ENSLOCG00000005058	zgc:110045	80	87.311	ENSAMXG00000003440	pcbp3	95	87.311	Astyanax_mexicanus
ENSLOCG00000005058	zgc:110045	78	83.594	ENSCAFG00020019472	-	83	83.594	Canis_lupus_dingo
ENSLOCG00000005058	zgc:110045	81	83.988	ENSCSAG00000007440	-	88	83.988	Chlorocebus_sabaeus
ENSLOCG00000005058	zgc:110045	100	91.772	ENSCPBG00000000733	-	100	97.260	Chrysemys_picta_bellii
ENSLOCG00000005058	zgc:110045	81	84.036	ENSCPBG00000012151	-	97	79.487	Chrysemys_picta_bellii
ENSLOCG00000005058	zgc:110045	79	79.692	ENSCSEG00000000822	pcbp3	96	79.692	Cynoglossus_semilaevis
ENSLOCG00000005058	zgc:110045	77	70.238	ENSCSEG00000016984	-	75	89.840	Cynoglossus_semilaevis
ENSLOCG00000005058	zgc:110045	80	83.180	ENSCVAG00000005262	-	95	82.875	Cyprinodon_variegatus
ENSLOCG00000005058	zgc:110045	80	85.976	ENSCVAG00000014482	pcbp3	93	85.976	Cyprinodon_variegatus
ENSLOCG00000005058	zgc:110045	56	68.545	ENSDARG00000110961	zgc:110045	100	67.136	Danio_rerio
ENSLOCG00000005058	zgc:110045	80	87.768	ENSDARG00000054378	pcbp3	95	87.462	Danio_rerio
ENSLOCG00000005058	zgc:110045	81	72.205	ENSETEG00000015988	-	97	72.205	Echinops_telfairi
ENSLOCG00000005058	zgc:110045	77	63.060	ENSEBUG00000005495	pcbp3	73	63.060	Eptatretus_burgeri
ENSLOCG00000005058	zgc:110045	98	61.975	ENSEBUG00000007485	-	92	72.727	Eptatretus_burgeri
ENSLOCG00000005058	zgc:110045	85	68.276	ENSEBUG00000016192	pcbp3	99	68.276	Eptatretus_burgeri
ENSLOCG00000005058	zgc:110045	79	86.544	ENSELUG00000003521	pcbp3	93	86.544	Esox_lucius
ENSLOCG00000005058	zgc:110045	79	83.436	ENSELUG00000001560	-	94	78.698	Esox_lucius
ENSLOCG00000005058	zgc:110045	81	84.545	ENSFALG00000003949	-	97	84.545	Ficedula_albicollis
ENSLOCG00000005058	zgc:110045	100	91.195	ENSFALG00000004411	-	100	90.776	Ficedula_albicollis
ENSLOCG00000005058	zgc:110045	80	80.061	ENSFHEG00000016615	pcbp3	93	80.061	Fundulus_heteroclitus
ENSLOCG00000005058	zgc:110045	80	80.734	ENSFHEG00000006539	-	95	80.734	Fundulus_heteroclitus
ENSLOCG00000005058	zgc:110045	79	60.983	ENSGMOG00000008611	-	98	60.983	Gadus_morhua
ENSLOCG00000005058	zgc:110045	80	70.655	ENSGMOG00000011992	pcbp3	95	70.857	Gadus_morhua
ENSLOCG00000005058	zgc:110045	83	94.461	ENSGALG00000013155	-	98	94.172	Gallus_gallus
ENSLOCG00000005058	zgc:110045	81	81.143	ENSGALG00000004394	-	97	81.143	Gallus_gallus
ENSLOCG00000005058	zgc:110045	79	82.154	ENSGAFG00000011430	pcbp3	93	82.154	Gambusia_affinis
ENSLOCG00000005058	zgc:110045	80	83.180	ENSGAFG00000010274	-	93	83.180	Gambusia_affinis
ENSLOCG00000005058	zgc:110045	79	75.581	ENSGACG00000014955	-	95	75.291	Gasterosteus_aculeatus
ENSLOCG00000005058	zgc:110045	79	78.551	ENSGACG00000002266	-	94	78.551	Gasterosteus_aculeatus
ENSLOCG00000005058	zgc:110045	73	75.630	ENSGAGG00000006956	-	94	75.630	Gopherus_agassizii
ENSLOCG00000005058	zgc:110045	96	88.831	ENSGAGG00000000271	-	100	88.927	Gopherus_agassizii
ENSLOCG00000005058	zgc:110045	80	85.671	ENSHBUG00000010697	pcbp3	93	85.671	Haplochromis_burtoni
ENSLOCG00000005058	zgc:110045	80	83.486	ENSHBUG00000021782	-	95	83.180	Haplochromis_burtoni
ENSLOCG00000005058	zgc:110045	80	86.239	ENSHCOG00000017868	pcbp3	93	86.239	Hippocampus_comes
ENSLOCG00000005058	zgc:110045	80	79.755	ENSHCOG00000006067	-	95	79.755	Hippocampus_comes
ENSLOCG00000005058	zgc:110045	59	60.000	ENSIPUG00000003914	zgc:110045	100	56.604	Ictalurus_punctatus
ENSLOCG00000005058	zgc:110045	80	87.462	ENSIPUG00000006238	pcbp3	95	87.462	Ictalurus_punctatus
ENSLOCG00000005058	zgc:110045	80	85.714	ENSKMAG00000003046	pcbp3	93	85.714	Kryptolebias_marmoratus
ENSLOCG00000005058	zgc:110045	80	82.569	ENSKMAG00000018530	-	93	82.569	Kryptolebias_marmoratus
ENSLOCG00000005058	zgc:110045	80	70.552	ENSLBEG00000006542	-	94	70.859	Labrus_bergylta
ENSLOCG00000005058	zgc:110045	79	80.247	ENSLBEG00000006201	pcbp3	93	80.247	Labrus_bergylta
ENSLOCG00000005058	zgc:110045	99	68.553	ENSLACG00000010386	pcbp3	79	79.787	Latimeria_chalumnae
ENSLOCG00000005058	zgc:110045	100	92.616	ENSLACG00000010804	zgc:110045	100	92.616	Latimeria_chalumnae
ENSLOCG00000005058	zgc:110045	79	80.556	ENSMAMG00000022336	pcbp3	90	80.556	Mastacembelus_armatus
ENSLOCG00000005058	zgc:110045	80	81.346	ENSMAMG00000011620	-	95	81.346	Mastacembelus_armatus
ENSLOCG00000005058	zgc:110045	80	83.486	ENSMZEG00005008993	pcbp3	96	83.486	Maylandia_zebra
ENSLOCG00000005058	zgc:110045	80	79.141	ENSMZEG00005014882	-	93	78.419	Maylandia_zebra
ENSLOCG00000005058	zgc:110045	100	91.824	ENSMGAG00000006794	-	100	90.356	Meleagris_gallopavo
ENSLOCG00000005058	zgc:110045	80	75.862	ENSMGAG00000001883	-	96	76.791	Meleagris_gallopavo
ENSLOCG00000005058	zgc:110045	80	80.122	ENSMMOG00000005216	-	95	80.122	Mola_mola
ENSLOCG00000005058	zgc:110045	79	79.755	ENSMMOG00000000730	pcbp3	85	79.755	Mola_mola
ENSLOCG00000005058	zgc:110045	58	77.209	ENSMODG00000027884	-	94	77.209	Monodelphis_domestica
ENSLOCG00000005058	zgc:110045	79	83.742	ENSMALG00000000691	pcbp3	93	83.742	Monopterus_albus
ENSLOCG00000005058	zgc:110045	81	73.429	ENSMPUG00000001779	-	89	73.429	Mustela_putorius_furo
ENSLOCG00000005058	zgc:110045	80	83.742	ENSNBRG00000016409	-	93	83.742	Neolamprologus_brichardi
ENSLOCG00000005058	zgc:110045	79	81.873	ENSNBRG00000016714	-	93	81.873	Neolamprologus_brichardi
ENSLOCG00000005058	zgc:110045	80	81.214	ENSOPRG00000003431	-	99	81.214	Ochotona_princeps
ENSLOCG00000005058	zgc:110045	80	83.180	ENSONIG00000004611	-	95	83.180	Oreochromis_niloticus
ENSLOCG00000005058	zgc:110045	79	81.395	ENSONIG00000012122	-	95	81.395	Oreochromis_niloticus
ENSLOCG00000005058	zgc:110045	85	81.034	ENSOCUG00000002696	-	88	84.242	Oryctolagus_cuniculus
ENSLOCG00000005058	zgc:110045	80	83.486	ENSORLG00000022739	-	95	83.180	Oryzias_latipes
ENSLOCG00000005058	zgc:110045	79	82.769	ENSORLG00000000059	pcbp3	97	82.769	Oryzias_latipes
ENSLOCG00000005058	zgc:110045	79	82.769	ENSORLG00020012671	pcbp3	95	82.769	Oryzias_latipes_hni
ENSLOCG00000005058	zgc:110045	80	83.180	ENSORLG00020006124	-	95	82.875	Oryzias_latipes_hni
ENSLOCG00000005058	zgc:110045	80	83.486	ENSORLG00015008051	-	93	83.486	Oryzias_latipes_hsok
ENSLOCG00000005058	zgc:110045	79	82.769	ENSORLG00015000429	pcbp3	95	82.769	Oryzias_latipes_hsok
ENSLOCG00000005058	zgc:110045	77	81.000	ENSOMEG00000020811	pcbp3	96	81.000	Oryzias_melastigma
ENSLOCG00000005058	zgc:110045	80	82.875	ENSOMEG00000020162	-	95	82.875	Oryzias_melastigma
ENSLOCG00000005058	zgc:110045	81	79.775	ENSOGAG00000008044	-	97	79.775	Otolemur_garnettii
ENSLOCG00000005058	zgc:110045	68	87.783	ENSPKIG00000020913	-	95	87.671	Paramormyrops_kingsleyae
ENSLOCG00000005058	zgc:110045	80	84.356	ENSPKIG00000019329	pcbp3	93	84.356	Paramormyrops_kingsleyae
ENSLOCG00000005058	zgc:110045	81	72.126	ENSPSIG00000014970	-	97	72.701	Pelodiscus_sinensis
ENSLOCG00000005058	zgc:110045	96	89.091	ENSPSIG00000008350	-	100	89.091	Pelodiscus_sinensis
ENSLOCG00000005058	zgc:110045	79	86.154	ENSPMGG00000022383	pcbp3	93	86.154	Periophthalmus_magnuspinnatus
ENSLOCG00000005058	zgc:110045	62	90.625	ENSPMAG00000004637	-	99	90.625	Petromyzon_marinus
ENSLOCG00000005058	zgc:110045	81	68.047	ENSPMAG00000004551	pcbp3	89	68.047	Petromyzon_marinus
ENSLOCG00000005058	zgc:110045	81	87.613	ENSPCIG00000028092	-	97	87.613	Phascolarctos_cinereus
ENSLOCG00000005058	zgc:110045	79	77.907	ENSPLAG00000011449	pcbp3	86	77.907	Poecilia_latipinna
ENSLOCG00000005058	zgc:110045	80	77.876	ENSPLAG00000004074	-	89	77.876	Poecilia_latipinna
ENSLOCG00000005058	zgc:110045	80	80.982	ENSPMEG00000006653	-	95	79.646	Poecilia_mexicana
ENSLOCG00000005058	zgc:110045	79	85.410	ENSPMEG00000021239	pcbp3	93	85.410	Poecilia_mexicana
ENSLOCG00000005058	zgc:110045	80	80.734	ENSPREG00000020585	-	95	80.734	Poecilia_reticulata
ENSLOCG00000005058	zgc:110045	79	78.287	ENSPREG00000015736	pcbp3	97	78.287	Poecilia_reticulata
ENSLOCG00000005058	zgc:110045	80	80.734	ENSPNYG00000013205	-	95	80.734	Pundamilia_nyererei
ENSLOCG00000005058	zgc:110045	81	78.916	ENSPNYG00000012326	pcbp3	95	78.916	Pundamilia_nyererei
ENSLOCG00000005058	zgc:110045	80	85.933	ENSPNAG00000008541	-	93	85.933	Pygocentrus_nattereri
ENSLOCG00000005058	zgc:110045	80	83.180	ENSPNAG00000015104	pcbp3	95	83.180	Pygocentrus_nattereri
ENSLOCG00000005058	zgc:110045	59	68.545	ENSPNAG00000006838	zgc:110045	100	66.197	Pygocentrus_nattereri
ENSLOCG00000005058	zgc:110045	81	83.988	ENSRNOG00000001245	Pcbp3	97	83.988	Rattus_norvegicus
ENSLOCG00000005058	zgc:110045	81	75.219	ENSRBIG00000028177	-	97	74.309	Rhinopithecus_bieti
ENSLOCG00000005058	zgc:110045	81	79.944	ENSSHAG00000007890	-	97	79.429	Sarcophilus_harrisii
ENSLOCG00000005058	zgc:110045	80	87.117	ENSSFOG00015014706	pcbp3	93	87.117	Scleropages_formosus
ENSLOCG00000005058	zgc:110045	82	84.731	ENSSFOG00015007118	-	94	85.410	Scleropages_formosus
ENSLOCG00000005058	zgc:110045	79	86.111	ENSSFOG00015010205	pcbp3	98	86.111	Scleropages_formosus
ENSLOCG00000005058	zgc:110045	79	80.308	ENSSMAG00000011929	pcbp3	95	80.308	Scophthalmus_maximus
ENSLOCG00000005058	zgc:110045	80	83.180	ENSSMAG00000003135	-	95	82.875	Scophthalmus_maximus
ENSLOCG00000005058	zgc:110045	80	81.288	ENSSDUG00000008502	-	99	75.915	Seriola_dumerili
ENSLOCG00000005058	zgc:110045	79	83.742	ENSSDUG00000011608	pcbp3	96	83.742	Seriola_dumerili
ENSLOCG00000005058	zgc:110045	80	83.486	ENSSLDG00000020161	-	93	83.486	Seriola_lalandi_dorsalis
ENSLOCG00000005058	zgc:110045	79	83.742	ENSSLDG00000008518	pcbp3	96	83.742	Seriola_lalandi_dorsalis
ENSLOCG00000005058	zgc:110045	100	90.084	ENSSPUG00000013214	-	100	87.975	Sphenodon_punctatus
ENSLOCG00000005058	zgc:110045	80	72.783	ENSSPAG00000023341	-	93	72.783	Stegastes_partitus
ENSLOCG00000005058	zgc:110045	78	78.361	ENSSPAG00000004190	-	97	78.361	Stegastes_partitus
ENSLOCG00000005058	zgc:110045	81	76.353	ENSTGUG00000003316	-	97	76.353	Taeniopygia_guttata
ENSLOCG00000005058	zgc:110045	81	88.822	ENSTGUG00000008158	-	97	88.822	Taeniopygia_guttata
ENSLOCG00000005058	zgc:110045	80	83.180	ENSTRUG00000013604	pcbp3	93	83.180	Takifugu_rubripes
ENSLOCG00000005058	zgc:110045	78	81.728	ENSTRUG00000006280	-	89	81.728	Takifugu_rubripes
ENSLOCG00000005058	zgc:110045	81	82.286	ENSTTRG00000015075	-	97	82.286	Tursiops_truncatus
ENSLOCG00000005058	zgc:110045	81	78.632	ENSXETG00000011483	pcbp1	97	78.632	Xenopus_tropicalis
ENSLOCG00000005058	zgc:110045	97	90.330	ENSXETG00000010491	pcbp2	100	90.330	Xenopus_tropicalis
ENSLOCG00000005058	zgc:110045	79	85.410	ENSXCOG00000020481	pcbp3	93	85.410	Xiphophorus_couchianus
ENSLOCG00000005058	zgc:110045	80	85.714	ENSXMAG00000008175	pcbp3	93	85.714	Xiphophorus_maculatus
ENSLOCG00000005058	zgc:110045	80	83.486	ENSXMAG00000028711	-	95	81.571	Xiphophorus_maculatus