EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005190 (Gene tree)
Gene ID: 102699109
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 32587 bases
Position: chrLG20:7061724-7094310
Accession: 102699109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006248	RRM_1	PF00076.22	6.8e-09	1	1
ENSLOCP00000006267	RRM_1	PF00076.22	6.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006275	-	5958	XM_006640358	ENSLOCP00000006267	1985 (aa)	-	W5MD08
ENSLOCT00000006256	-	5979	-	ENSLOCP00000006248	1946 (aa)	XP_015221758	W5MCY9

Gene Model

Click here to download ENSLOCG00000005190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005190	setd1ba	90	63.679	ENSAPEG00000010762	setd1ba	73	65.067	Amphiprion_percula
ENSLOCG00000005190	setd1ba	94	62.369	ENSATEG00000021563	setd1ba	93	63.480	Anabas_testudineus
ENSLOCG00000005190	setd1ba	90	64.062	ENSAPLG00000005217	SETD1B	73	67.879	Anas_platyrhynchos
ENSLOCG00000005190	setd1ba	56	73.941	ENSTSYG00000033777	SETD1B	84	66.794	Carlito_syrichta
ENSLOCG00000005190	setd1ba	67	70.085	ENSCLAG00000013200	SETD1B	79	71.041	Chinchilla_lanigera
ENSLOCG00000005190	setd1ba	55	70.522	ENSCANG00000023445	SETD1B	68	70.522	Colobus_angolensis_palliatus
ENSLOCG00000005190	setd1ba	58	76.152	ENSCGRG00000018075	Setd1b	55	71.707	Cricetulus_griseus_crigri
ENSLOCG00000005190	setd1ba	82	75.503	ENSELUG00000022712	-	57	71.963	Esox_lucius
ENSLOCG00000005190	setd1ba	85	64.780	ENSGAFG00000008712	setd1ba	80	67.267	Gambusia_affinis
ENSLOCG00000005190	setd1ba	89	59.030	ENSGACG00000017002	setd1ba	68	70.909	Gasterosteus_aculeatus
ENSLOCG00000005190	setd1ba	51	61.965	ENSSTOG00000012430	SETD1B	75	59.517	Ictidomys_tridecemlineatus
ENSLOCG00000005190	setd1ba	99	55.140	ENSLBEG00000020113	setd1ba	54	78.610	Labrus_bergylta
ENSLOCG00000005190	setd1ba	51	62.121	ENSMICG00000001152	SETD1B	64	59.063	Microcebus_murinus
ENSLOCG00000005190	setd1ba	90	64.793	ENSNBRG00000002915	setd1ba	73	68.066	Neolamprologus_brichardi
ENSLOCG00000005190	setd1ba	54	76.923	ENSNLEG00000001254	SETD1B	50	76.923	Nomascus_leucogenys
ENSLOCG00000005190	setd1ba	70	65.236	ENSODEG00000010155	SETD1B	63	58.537	Octodon_degus
ENSLOCG00000005190	setd1ba	92	61.257	ENSORLG00000008435	setd1ba	75	63.363	Oryzias_latipes
ENSLOCG00000005190	setd1ba	92	61.257	ENSORLG00020017079	setd1ba	75	63.363	Oryzias_latipes_hni
ENSLOCG00000005190	setd1ba	65	55.381	ENSORLG00015004156	setd1ba	51	64.715	Oryzias_latipes_hsok
ENSLOCG00000005190	setd1ba	87	62.656	ENSPMGG00000011527	setd1ba	54	62.798	Periophthalmus_magnuspinnatus
ENSLOCG00000005190	setd1ba	56	63.485	ENSPCIG00000028605	SETD1B	67	59.443	Phascolarctos_cinereus
ENSLOCG00000005190	setd1ba	51	65.310	ENSSBOG00000033322	SETD1B	82	65.038	Saimiri_boliviensis_boliviensis
ENSLOCG00000005190	setd1ba	79	76.378	ENSSFOG00015004814	SETD1B	96	76.378	Scleropages_formosus
ENSLOCG00000005190	setd1ba	52	65.665	ENSUAMG00000008729	SETD1B	73	56.734	Ursus_americanus