EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005214 (Gene tree)
Gene ID: 102697288
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 9427 bases
Position: chrLG5:7309875-7319301
Accession: 102697288
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006272	MMR_HSR1	PF01926.23	9.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006280	-	4904	XM_006630270	ENSLOCP00000006272	198 (aa)	XP_006630333	W5MD13

Gene Model

Click here to download ENSLOCG00000005214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005214's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005214	-	67	32.836	ENSLOCG00000010957	arl8bb	71	32.836
ENSLOCG00000005214	-	64	39.844	ENSLOCG00000017800	arl11	71	39.844
ENSLOCG00000005214	-	88	34.444	ENSLOCG00000017515	arl4d	84	34.444
ENSLOCG00000005214	-	96	31.937	ENSLOCG00000010965	arl3l2	96	31.937
ENSLOCG00000005214	-	100	93.434	ENSLOCG00000010197	sar1b	100	93.434
ENSLOCG00000005214	-	73	32.215	ENSLOCG00000017842	arl4cb	74	32.215
ENSLOCG00000005214	-	87	30.233	ENSLOCG00000012693	arl3	88	30.233
ENSLOCG00000005214	-	72	33.784	ENSLOCG00000018349	arl4aa	72	33.784
ENSLOCG00000005214	-	67	32.090	ENSLOCG00000012467	arl8a	72	32.090
ENSLOCG00000005214	-	87	30.233	ENSLOCG00000013270	ARF4	89	30.233
ENSLOCG00000005214	-	87	31.034	ENSLOCG00000016776	-	89	31.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005214	-	100	90.404	ENSAPOG00000007186	sar1b	100	90.404	Acanthochromis_polyacanthus
ENSLOCG00000005214	-	100	87.879	ENSAPOG00000017891	-	100	87.879	Acanthochromis_polyacanthus
ENSLOCG00000005214	-	100	91.919	ENSACIG00000013634	sar1b	100	91.919	Amphilophus_citrinellus
ENSLOCG00000005214	-	100	86.869	ENSACIG00000024513	-	100	86.869	Amphilophus_citrinellus
ENSLOCG00000005214	-	100	87.879	ENSAOCG00000002627	-	100	87.879	Amphiprion_ocellaris
ENSLOCG00000005214	-	100	89.899	ENSAOCG00000005888	sar1b	100	89.899	Amphiprion_ocellaris
ENSLOCG00000005214	-	100	89.899	ENSAPEG00000022771	sar1b	100	89.899	Amphiprion_percula
ENSLOCG00000005214	-	100	87.879	ENSAPEG00000019680	-	100	87.879	Amphiprion_percula
ENSLOCG00000005214	-	100	85.859	ENSATEG00000023368	-	100	85.859	Anabas_testudineus
ENSLOCG00000005214	-	100	88.384	ENSATEG00000012904	sar1b	100	88.384	Anabas_testudineus
ENSLOCG00000005214	-	100	92.424	ENSACAG00000001470	-	100	92.424	Anolis_carolinensis
ENSLOCG00000005214	-	100	87.879	ENSACLG00000005011	-	100	87.879	Astatotilapia_calliptera
ENSLOCG00000005214	-	100	90.909	ENSACLG00000014649	sar1b	100	90.909	Astatotilapia_calliptera
ENSLOCG00000005214	-	59	95.726	ENSAMXG00000018108	sar1b	84	95.726	Astyanax_mexicanus
ENSLOCG00000005214	-	100	90.404	ENSAMXG00000034192	-	91	90.404	Astyanax_mexicanus
ENSLOCG00000005214	-	100	86.364	ENSCSEG00000016976	-	100	86.364	Cynoglossus_semilaevis
ENSLOCG00000005214	-	100	83.838	ENSCSEG00000015238	sar1b	97	83.838	Cynoglossus_semilaevis
ENSLOCG00000005214	-	100	91.414	ENSCVAG00000022959	sar1b	100	91.414	Cyprinodon_variegatus
ENSLOCG00000005214	-	100	92.424	ENSDARG00000103403	sar1b	100	92.424	Danio_rerio
ENSLOCG00000005214	-	99	72.449	FBgn0038947	Sar1	99	72.449	Drosophila_melanogaster
ENSLOCG00000005214	-	97	88.021	ENSEBUG00000011723	sar1b	97	88.021	Eptatretus_burgeri
ENSLOCG00000005214	-	100	92.424	ENSELUG00000020912	sar1b	100	92.424	Esox_lucius
ENSLOCG00000005214	-	100	90.404	ENSFHEG00000019865	sar1b	100	90.404	Fundulus_heteroclitus
ENSLOCG00000005214	-	100	91.919	ENSGMOG00000008023	sar1b	100	91.919	Gadus_morhua
ENSLOCG00000005214	-	100	89.394	ENSGAFG00000007081	sar1b	100	89.394	Gambusia_affinis
ENSLOCG00000005214	-	100	88.384	ENSGACG00000001474	sar1b	100	88.384	Gasterosteus_aculeatus
ENSLOCG00000005214	-	100	90.909	ENSHBUG00000000915	sar1b	100	90.909	Haplochromis_burtoni
ENSLOCG00000005214	-	100	87.879	ENSHBUG00000018397	-	100	87.879	Haplochromis_burtoni
ENSLOCG00000005214	-	100	90.404	ENSHCOG00000010953	sar1b	100	90.404	Hippocampus_comes
ENSLOCG00000005214	-	100	90.909	ENSIPUG00000010046	sar1b	100	90.909	Ictalurus_punctatus
ENSLOCG00000005214	-	100	90.909	ENSIPUG00000020925	sar1b	100	90.909	Ictalurus_punctatus
ENSLOCG00000005214	-	100	85.354	ENSKMAG00000014875	-	100	85.354	Kryptolebias_marmoratus
ENSLOCG00000005214	-	100	89.394	ENSKMAG00000019693	sar1b	100	89.394	Kryptolebias_marmoratus
ENSLOCG00000005214	-	100	89.394	ENSLBEG00000016945	-	100	89.394	Labrus_bergylta
ENSLOCG00000005214	-	100	87.374	ENSLBEG00000027550	sar1b	100	87.374	Labrus_bergylta
ENSLOCG00000005214	-	100	73.869	ENSLACG00000017029	-	100	73.869	Latimeria_chalumnae
ENSLOCG00000005214	-	100	86.364	ENSLACG00000010795	sar1b	100	86.364	Latimeria_chalumnae
ENSLOCG00000005214	-	100	88.889	ENSMAMG00000021732	sar1b	100	88.889	Mastacembelus_armatus
ENSLOCG00000005214	-	100	90.909	ENSMZEG00005008942	sar1b	100	90.909	Maylandia_zebra
ENSLOCG00000005214	-	100	87.879	ENSMZEG00005001012	-	100	87.879	Maylandia_zebra
ENSLOCG00000005214	-	90	94.413	ENSMGAG00000005387	-	91	94.413	Meleagris_gallopavo
ENSLOCG00000005214	-	100	88.384	ENSMMOG00000013803	-	100	88.384	Mola_mola
ENSLOCG00000005214	-	100	90.404	ENSMALG00000016635	sar1b	97	89.011	Monopterus_albus
ENSLOCG00000005214	-	100	91.414	ENSNBRG00000008013	sar1b	100	91.414	Neolamprologus_brichardi
ENSLOCG00000005214	-	100	87.879	ENSNBRG00000014004	-	100	87.879	Neolamprologus_brichardi
ENSLOCG00000005214	-	100	91.414	ENSONIG00000017278	sar1b	100	91.414	Oreochromis_niloticus
ENSLOCG00000005214	-	100	89.394	ENSORLG00000000932	sar1b	100	89.394	Oryzias_latipes
ENSLOCG00000005214	-	100	89.394	ENSORLG00020021985	sar1b	100	89.394	Oryzias_latipes_hni
ENSLOCG00000005214	-	100	89.394	ENSORLG00015007044	sar1b	100	89.394	Oryzias_latipes_hsok
ENSLOCG00000005214	-	100	89.394	ENSOMEG00000001052	sar1b	100	89.394	Oryzias_melastigma
ENSLOCG00000005214	-	100	91.919	ENSPKIG00000017353	-	100	91.919	Paramormyrops_kingsleyae
ENSLOCG00000005214	-	100	90.909	ENSPKIG00000010688	sar1b	100	90.909	Paramormyrops_kingsleyae
ENSLOCG00000005214	-	59	93.966	ENSPMGG00000001234	sar1b	91	93.966	Periophthalmus_magnuspinnatus
ENSLOCG00000005214	-	100	85.572	ENSPMAG00000003593	sar1b	100	85.572	Petromyzon_marinus
ENSLOCG00000005214	-	100	89.394	ENSPFOG00000005666	sar1b	100	89.394	Poecilia_formosa
ENSLOCG00000005214	-	100	89.899	ENSPLAG00000012223	sar1b	100	89.899	Poecilia_latipinna
ENSLOCG00000005214	-	59	88.889	ENSPLAG00000001016	-	75	88.889	Poecilia_latipinna
ENSLOCG00000005214	-	100	89.394	ENSPMEG00000016831	sar1b	100	89.394	Poecilia_mexicana
ENSLOCG00000005214	-	100	89.394	ENSPREG00000005312	sar1b	90	89.394	Poecilia_reticulata
ENSLOCG00000005214	-	60	88.136	ENSPREG00000002020	-	87	88.136	Poecilia_reticulata
ENSLOCG00000005214	-	100	90.909	ENSPNYG00000012440	sar1b	100	90.909	Pundamilia_nyererei
ENSLOCG00000005214	-	100	88.384	ENSPNYG00000021357	-	100	88.384	Pundamilia_nyererei
ENSLOCG00000005214	-	100	93.434	ENSPNAG00000014683	sar1b	100	93.434	Pygocentrus_nattereri
ENSLOCG00000005214	-	100	89.899	ENSPNAG00000001123	-	100	89.899	Pygocentrus_nattereri
ENSLOCG00000005214	-	100	93.434	ENSSFOG00015020051	sar1b	100	93.434	Scleropages_formosus
ENSLOCG00000005214	-	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSLOCG00000005214	-	100	87.879	ENSSMAG00000007106	sar1b	80	87.879	Scophthalmus_maximus
ENSLOCG00000005214	-	100	86.869	ENSSMAG00000002165	-	100	86.869	Scophthalmus_maximus
ENSLOCG00000005214	-	100	90.909	ENSSDUG00000020926	sar1b	100	90.909	Seriola_dumerili
ENSLOCG00000005214	-	100	87.374	ENSSDUG00000019629	-	100	87.374	Seriola_dumerili
ENSLOCG00000005214	-	100	90.909	ENSSLDG00000017052	sar1b	100	90.909	Seriola_lalandi_dorsalis
ENSLOCG00000005214	-	100	87.374	ENSSLDG00000024197	-	100	87.374	Seriola_lalandi_dorsalis
ENSLOCG00000005214	-	100	91.919	ENSSPUG00000010247	-	100	91.919	Sphenodon_punctatus
ENSLOCG00000005214	-	100	90.909	ENSSPAG00000017634	sar1b	100	90.909	Stegastes_partitus
ENSLOCG00000005214	-	100	87.374	ENSSPAG00000015626	-	100	87.374	Stegastes_partitus
ENSLOCG00000005214	-	100	87.879	ENSTRUG00000023908	sar1b	100	87.879	Takifugu_rubripes
ENSLOCG00000005214	-	100	87.879	ENSTNIG00000016097	sar1b	100	87.879	Tetraodon_nigroviridis
ENSLOCG00000005214	-	59	87.179	ENSXCOG00000006154	-	79	87.179	Xiphophorus_couchianus
ENSLOCG00000005214	-	90	89.888	ENSXCOG00000004160	sar1b	87	89.888	Xiphophorus_couchianus
ENSLOCG00000005214	-	100	89.394	ENSXMAG00000008294	sar1b	100	89.394	Xiphophorus_maculatus