EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005280 (Gene tree)
Gene ID: 102690877
Gene Symbol: zcchc17
Alias: ps1d|zgc:85656
Full Name: zinc finger CCHC-type containing 17
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 14883 bases
Position: chrLG6:10001256-10016138
Accession: 102690877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006361	S1	PF00575.23	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006369	-	4014	XM_006631446	ENSLOCP00000006361	259 (aa)	XP_015204192	W5MDA2

Gene Model

Click here to download ENSLOCG00000005280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005280's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005280	zcchc17	59	76.974	ENSG00000121766	ZCCHC17	94	75.912	Homo_sapiens
ENSLOCG00000005280	zcchc17	65	66.272	ENSAPOG00000021724	zcchc17	66	65.680	Acanthochromis_polyacanthus
ENSLOCG00000005280	zcchc17	59	76.974	ENSAMEG00000017710	-	63	77.483	Ailuropoda_melanoleuca
ENSLOCG00000005280	zcchc17	61	70.701	ENSACIG00000020915	zcchc17	89	69.173	Amphilophus_citrinellus
ENSLOCG00000005280	zcchc17	65	66.272	ENSAOCG00000003880	zcchc17	67	65.680	Amphiprion_ocellaris
ENSLOCG00000005280	zcchc17	71	63.243	ENSAPEG00000014460	zcchc17	68	65.680	Amphiprion_percula
ENSLOCG00000005280	zcchc17	58	71.333	ENSATEG00000015942	zcchc17	61	71.523	Anabas_testudineus
ENSLOCG00000005280	zcchc17	57	73.649	ENSACAG00000000389	ZCCHC17	63	73.510	Anolis_carolinensis
ENSLOCG00000005280	zcchc17	59	76.974	ENSANAG00000024208	ZCCHC17	94	75.912	Aotus_nancymaae
ENSLOCG00000005280	zcchc17	66	68.421	ENSACLG00000019174	zcchc17	67	68.235	Astatotilapia_calliptera
ENSLOCG00000005280	zcchc17	64	75.301	ENSAMXG00000020595	zcchc17	75	73.256	Astyanax_mexicanus
ENSLOCG00000005280	zcchc17	59	74.342	ENSBTAG00000001432	-	63	74.834	Bos_taurus
ENSLOCG00000005280	zcchc17	59	76.974	ENSBTAG00000016818	ZCCHC17	63	77.483	Bos_taurus
ENSLOCG00000005280	zcchc17	59	75.658	ENSCJAG00000045207	-	63	76.159	Callithrix_jacchus
ENSLOCG00000005280	zcchc17	59	76.316	ENSCJAG00000006259	ZCCHC17	94	75.182	Callithrix_jacchus
ENSLOCG00000005280	zcchc17	59	76.974	ENSCAFG00000011131	-	63	77.483	Canis_familiaris
ENSLOCG00000005280	zcchc17	59	74.342	ENSCAFG00000001857	-	63	74.834	Canis_familiaris
ENSLOCG00000005280	zcchc17	52	66.026	ENSCAFG00020024828	ZCCHC17	84	78.030	Canis_lupus_dingo
ENSLOCG00000005280	zcchc17	54	71.942	ENSCAFG00020016032	-	87	71.942	Canis_lupus_dingo
ENSLOCG00000005280	zcchc17	59	76.974	ENSCHIG00000015629	-	63	77.483	Capra_hircus
ENSLOCG00000005280	zcchc17	59	76.974	ENSTSYG00000000490	-	94	75.912	Carlito_syrichta
ENSLOCG00000005280	zcchc17	59	75.658	ENSCAPG00000006774	ZCCHC17	70	76.159	Cavia_aperea
ENSLOCG00000005280	zcchc17	59	76.974	ENSCPOG00000000106	ZCCHC17	63	77.483	Cavia_porcellus
ENSLOCG00000005280	zcchc17	59	76.316	ENSCPOG00000022394	-	73	76.821	Cavia_porcellus
ENSLOCG00000005280	zcchc17	59	76.974	ENSCCAG00000033666	ZCCHC17	94	75.912	Cebus_capucinus
ENSLOCG00000005280	zcchc17	59	76.974	ENSCATG00000044586	ZCCHC17	94	75.912	Cercocebus_atys
ENSLOCG00000005280	zcchc17	58	77.483	ENSCLAG00000008794	ZCCHC17	63	77.483	Chinchilla_lanigera
ENSLOCG00000005280	zcchc17	59	76.974	ENSCSAG00000001032	ZCCHC17	63	77.483	Chlorocebus_sabaeus
ENSLOCG00000005280	zcchc17	59	62.500	ENSCHOG00000001581	ZCCHC17	63	62.914	Choloepus_hoffmanni
ENSLOCG00000005280	zcchc17	59	76.974	ENSCANG00000038509	ZCCHC17	94	75.912	Colobus_angolensis_palliatus
ENSLOCG00000005280	zcchc17	58	77.483	ENSCGRG00001014387	Zcchc17	68	75.610	Cricetulus_griseus_chok1gshd
ENSLOCG00000005280	zcchc17	58	77.483	ENSCGRG00000013323	Zcchc17	68	75.610	Cricetulus_griseus_crigri
ENSLOCG00000005280	zcchc17	65	66.272	ENSCSEG00000016039	zcchc17	86	67.669	Cynoglossus_semilaevis
ENSLOCG00000005280	zcchc17	61	72.152	ENSCVAG00000007112	zcchc17	63	72.152	Cyprinodon_variegatus
ENSLOCG00000005280	zcchc17	57	78.378	ENSDARG00000018936	zcchc17	64	78.808	Danio_rerio
ENSLOCG00000005280	zcchc17	61	77.070	ENSDNOG00000000509	-	63	77.483	Dasypus_novemcinctus
ENSLOCG00000005280	zcchc17	51	78.030	ENSDORG00000004128	Zcchc17	87	78.030	Dipodomys_ordii
ENSLOCG00000005280	zcchc17	95	57.661	ENSETEG00000007421	ZCCHC17	63	77.333	Echinops_telfairi
ENSLOCG00000005280	zcchc17	59	76.974	ENSEASG00005010819	ZCCHC17	63	77.483	Equus_asinus_asinus
ENSLOCG00000005280	zcchc17	59	76.974	ENSECAG00000025040	ZCCHC17	55	77.483	Equus_caballus
ENSLOCG00000005280	zcchc17	59	73.684	ENSEEUG00000014855	ZCCHC17	63	74.172	Erinaceus_europaeus
ENSLOCG00000005280	zcchc17	91	55.745	ENSELUG00000002450	zcchc17	64	75.497	Esox_lucius
ENSLOCG00000005280	zcchc17	59	76.974	ENSFCAG00000004196	ZCCHC17	93	75.912	Felis_catus
ENSLOCG00000005280	zcchc17	58	79.333	ENSFALG00000001165	ZCCHC17	61	79.470	Ficedula_albicollis
ENSLOCG00000005280	zcchc17	59	76.974	ENSFDAG00000016520	ZCCHC17	63	77.483	Fukomys_damarensis
ENSLOCG00000005280	zcchc17	59	70.395	ENSGMOG00000010452	zcchc17	60	70.861	Gadus_morhua
ENSLOCG00000005280	zcchc17	58	78.146	ENSGALG00000000618	ZCCHC17	63	78.146	Gallus_gallus
ENSLOCG00000005280	zcchc17	61	70.064	ENSGACG00000005616	zcchc17	59	71.523	Gasterosteus_aculeatus
ENSLOCG00000005280	zcchc17	62	75.776	ENSGAGG00000019515	ZCCHC17	66	75.776	Gopherus_agassizii
ENSLOCG00000005280	zcchc17	59	76.974	ENSGGOG00000009126	ZCCHC17	94	75.912	Gorilla_gorilla
ENSLOCG00000005280	zcchc17	66	68.421	ENSHBUG00000018638	zcchc17	67	68.235	Haplochromis_burtoni
ENSLOCG00000005280	zcchc17	59	71.711	ENSHGLG00000005931	-	67	72.185	Heterocephalus_glaber_female
ENSLOCG00000005280	zcchc17	59	76.974	ENSHGLG00000019323	ZCCHC17	63	77.483	Heterocephalus_glaber_female
ENSLOCG00000005280	zcchc17	94	47.325	ENSHGLG00000014866	-	66	63.576	Heterocephalus_glaber_female
ENSLOCG00000005280	zcchc17	94	47.325	ENSHGLG00100000976	-	66	63.576	Heterocephalus_glaber_male
ENSLOCG00000005280	zcchc17	58	73.510	ENSHGLG00100019907	-	63	73.510	Heterocephalus_glaber_male
ENSLOCG00000005280	zcchc17	59	71.711	ENSHGLG00100009772	-	68	72.185	Heterocephalus_glaber_male
ENSLOCG00000005280	zcchc17	52	68.874	ENSHGLG00100014521	ZCCHC17	86	78.030	Heterocephalus_glaber_male
ENSLOCG00000005280	zcchc17	59	69.935	ENSHCOG00000005075	zcchc17	69	65.294	Hippocampus_comes
ENSLOCG00000005280	zcchc17	64	73.054	ENSIPUG00000020511	zcchc17	75	71.098	Ictalurus_punctatus
ENSLOCG00000005280	zcchc17	59	76.974	ENSSTOG00000003825	ZCCHC17	63	77.483	Ictidomys_tridecemlineatus
ENSLOCG00000005280	zcchc17	61	68.790	ENSKMAG00000003662	zcchc17	61	69.536	Kryptolebias_marmoratus
ENSLOCG00000005280	zcchc17	60	69.032	ENSLBEG00000002644	zcchc17	59	71.622	Labrus_bergylta
ENSLOCG00000005280	zcchc17	61	70.886	ENSLACG00000016945	ZCCHC17	64	74.000	Latimeria_chalumnae
ENSLOCG00000005280	zcchc17	59	76.974	ENSLAFG00000015364	ZCCHC17	62	77.483	Loxodonta_africana
ENSLOCG00000005280	zcchc17	59	76.974	ENSMFAG00000039045	ZCCHC17	94	75.912	Macaca_fascicularis
ENSLOCG00000005280	zcchc17	59	76.974	ENSMMUG00000012156	ZCCHC17	94	75.912	Macaca_mulatta
ENSLOCG00000005280	zcchc17	59	76.974	ENSMNEG00000032021	ZCCHC17	94	75.912	Macaca_nemestrina
ENSLOCG00000005280	zcchc17	59	76.974	ENSMLEG00000040817	ZCCHC17	94	75.912	Mandrillus_leucophaeus
ENSLOCG00000005280	zcchc17	60	72.258	ENSMAMG00000011701	zcchc17	60	72.848	Mastacembelus_armatus
ENSLOCG00000005280	zcchc17	66	68.421	ENSMZEG00005005784	zcchc17	67	68.235	Maylandia_zebra
ENSLOCG00000005280	zcchc17	58	78.808	ENSMGAG00000000777	ZCCHC17	61	78.808	Meleagris_gallopavo
ENSLOCG00000005280	zcchc17	54	78.014	ENSMAUG00000005269	Zcchc17	61	79.562	Mesocricetus_auratus
ENSLOCG00000005280	zcchc17	59	68.421	ENSMICG00000028289	-	62	68.874	Microcebus_murinus
ENSLOCG00000005280	zcchc17	59	76.974	ENSMICG00000009354	-	94	75.912	Microcebus_murinus
ENSLOCG00000005280	zcchc17	62	61.250	ENSMICG00000027526	-	64	65.035	Microcebus_murinus
ENSLOCG00000005280	zcchc17	58	77.483	ENSMOCG00000014937	Zcchc17	63	77.483	Microtus_ochrogaster
ENSLOCG00000005280	zcchc17	54	65.468	ENSMMOG00000019813	zcchc17	63	64.085	Mola_mola
ENSLOCG00000005280	zcchc17	58	77.483	ENSMODG00000017082	-	61	77.483	Monodelphis_domestica
ENSLOCG00000005280	zcchc17	58	68.212	ENSMODG00000025345	-	72	66.887	Monodelphis_domestica
ENSLOCG00000005280	zcchc17	58	72.185	ENSMODG00000020372	-	81	72.185	Monodelphis_domestica
ENSLOCG00000005280	zcchc17	95	54.656	ENSMALG00000016295	zcchc17	69	67.470	Monopterus_albus
ENSLOCG00000005280	zcchc17	58	77.483	MGP_CAROLIEiJ_G0026546	Zcchc17	63	77.483	Mus_caroli
ENSLOCG00000005280	zcchc17	58	77.483	ENSMUSG00000028772	Zcchc17	63	77.483	Mus_musculus
ENSLOCG00000005280	zcchc17	58	77.483	MGP_PahariEiJ_G0028878	Zcchc17	63	77.483	Mus_pahari
ENSLOCG00000005280	zcchc17	58	77.483	MGP_SPRETEiJ_G0027526	Zcchc17	63	77.483	Mus_spretus
ENSLOCG00000005280	zcchc17	59	68.421	ENSMPUG00000015442	ZCCHC17	63	68.874	Mustela_putorius_furo
ENSLOCG00000005280	zcchc17	61	75.949	ENSMLUG00000000594	ZCCHC17	63	77.483	Myotis_lucifugus
ENSLOCG00000005280	zcchc17	59	75.000	ENSNGAG00000022689	Zcchc17	62	75.497	Nannospalax_galili
ENSLOCG00000005280	zcchc17	59	76.974	ENSNLEG00000001493	ZCCHC17	94	75.912	Nomascus_leucogenys
ENSLOCG00000005280	zcchc17	75	65.306	ENSOPRG00000014449	ZCCHC17	70	79.562	Ochotona_princeps
ENSLOCG00000005280	zcchc17	59	76.974	ENSODEG00000003683	ZCCHC17	63	77.483	Octodon_degus
ENSLOCG00000005280	zcchc17	66	66.279	ENSONIG00000002308	zcchc17	61	72.185	Oreochromis_niloticus
ENSLOCG00000005280	zcchc17	58	70.861	ENSOCUG00000027238	-	62	71.333	Oryctolagus_cuniculus
ENSLOCG00000005280	zcchc17	61	71.975	ENSORLG00000011563	zcchc17	68	72.848	Oryzias_latipes
ENSLOCG00000005280	zcchc17	61	71.975	ENSORLG00020019636	zcchc17	71	72.848	Oryzias_latipes_hni
ENSLOCG00000005280	zcchc17	61	71.519	ENSORLG00015011437	zcchc17	62	72.848	Oryzias_latipes_hsok
ENSLOCG00000005280	zcchc17	61	71.338	ENSOMEG00000009464	zcchc17	61	72.185	Oryzias_melastigma
ENSLOCG00000005280	zcchc17	59	76.316	ENSOGAG00000013749	ZCCHC17	63	76.821	Otolemur_garnettii
ENSLOCG00000005280	zcchc17	59	76.471	ENSOARG00000001618	-	63	76.974	Ovis_aries
ENSLOCG00000005280	zcchc17	59	76.974	ENSPPAG00000030937	ZCCHC17	94	75.912	Pan_paniscus
ENSLOCG00000005280	zcchc17	59	76.974	ENSPPRG00000003044	ZCCHC17	93	75.912	Panthera_pardus
ENSLOCG00000005280	zcchc17	59	76.974	ENSPTIG00000010650	ZCCHC17	93	75.912	Panthera_tigris_altaica
ENSLOCG00000005280	zcchc17	59	76.974	ENSPTRG00000000456	ZCCHC17	94	75.912	Pan_troglodytes
ENSLOCG00000005280	zcchc17	59	76.974	ENSPANG00000016167	ZCCHC17	94	75.912	Papio_anubis
ENSLOCG00000005280	zcchc17	58	82.667	ENSPKIG00000010742	zcchc17	64	77.647	Paramormyrops_kingsleyae
ENSLOCG00000005280	zcchc17	58	75.497	ENSPSIG00000007187	ZCCHC17	68	71.006	Pelodiscus_sinensis
ENSLOCG00000005280	zcchc17	61	69.427	ENSPMGG00000005830	zcchc17	61	70.199	Periophthalmus_magnuspinnatus
ENSLOCG00000005280	zcchc17	58	76.821	ENSPEMG00000015853	-	63	76.821	Peromyscus_maniculatus_bairdii
ENSLOCG00000005280	zcchc17	58	76.821	ENSPCIG00000014143	-	62	76.821	Phascolarctos_cinereus
ENSLOCG00000005280	zcchc17	61	67.722	ENSPFOG00000007896	zcchc17	64	69.536	Poecilia_formosa
ENSLOCG00000005280	zcchc17	61	67.722	ENSPLAG00000007114	zcchc17	69	63.584	Poecilia_latipinna
ENSLOCG00000005280	zcchc17	61	67.722	ENSPMEG00000014567	zcchc17	69	63.584	Poecilia_mexicana
ENSLOCG00000005280	zcchc17	59	75.000	ENSPPYG00000001617	-	53	75.497	Pongo_abelii
ENSLOCG00000005280	zcchc17	59	70.395	ENSPCAG00000011665	ZCCHC17	63	70.861	Procavia_capensis
ENSLOCG00000005280	zcchc17	59	76.974	ENSPCOG00000024007	ZCCHC17	94	75.912	Propithecus_coquereli
ENSLOCG00000005280	zcchc17	59	76.974	ENSPVAG00000014747	ZCCHC17	63	77.483	Pteropus_vampyrus
ENSLOCG00000005280	zcchc17	66	68.421	ENSPNYG00000009648	zcchc17	94	70.370	Pundamilia_nyererei
ENSLOCG00000005280	zcchc17	58	79.470	ENSPNAG00000026780	zcchc17	65	79.470	Pygocentrus_nattereri
ENSLOCG00000005280	zcchc17	58	77.483	ENSRNOG00000012266	Zcchc17	63	77.483	Rattus_norvegicus
ENSLOCG00000005280	zcchc17	59	76.974	ENSRBIG00000033939	ZCCHC17	94	75.912	Rhinopithecus_bieti
ENSLOCG00000005280	zcchc17	59	76.974	ENSRROG00000028866	ZCCHC17	94	75.912	Rhinopithecus_roxellana
ENSLOCG00000005280	zcchc17	59	76.974	ENSSBOG00000029249	ZCCHC17	94	75.912	Saimiri_boliviensis_boliviensis
ENSLOCG00000005280	zcchc17	58	76.159	ENSSHAG00000008748	ZCCHC17	67	76.250	Sarcophilus_harrisii
ENSLOCG00000005280	zcchc17	59	84.416	ENSSFOG00015021334	zcchc17	63	79.641	Scleropages_formosus
ENSLOCG00000005280	zcchc17	61	71.338	ENSSDUG00000009095	zcchc17	60	72.185	Seriola_dumerili
ENSLOCG00000005280	zcchc17	61	70.701	ENSSLDG00000009837	zcchc17	72	72.185	Seriola_lalandi_dorsalis
ENSLOCG00000005280	zcchc17	65	73.099	ENSSPUG00000006912	ZCCHC17	68	72.254	Sphenodon_punctatus
ENSLOCG00000005280	zcchc17	58	69.333	ENSSPAG00000016785	zcchc17	66	63.793	Stegastes_partitus
ENSLOCG00000005280	zcchc17	59	76.974	ENSSSCG00000031639	ZCCHC17	63	77.483	Sus_scrofa
ENSLOCG00000005280	zcchc17	53	71.739	ENSTGUG00000000817	ZCCHC17	62	71.739	Taeniopygia_guttata
ENSLOCG00000005280	zcchc17	93	51.029	ENSTRUG00000013252	zcchc17	65	66.071	Takifugu_rubripes
ENSLOCG00000005280	zcchc17	71	60.326	ENSTNIG00000016980	zcchc17	68	61.677	Tetraodon_nigroviridis
ENSLOCG00000005280	zcchc17	59	76.974	ENSTTRG00000014870	ZCCHC17	63	77.483	Tursiops_truncatus
ENSLOCG00000005280	zcchc17	59	76.974	ENSUAMG00000018258	ZCCHC17	77	77.483	Ursus_americanus
ENSLOCG00000005280	zcchc17	59	76.974	ENSUMAG00000009188	-	63	77.483	Ursus_maritimus
ENSLOCG00000005280	zcchc17	58	76.159	ENSVPAG00000003834	ZCCHC17	63	76.159	Vicugna_pacos
ENSLOCG00000005280	zcchc17	60	79.487	ENSXETG00000012917	zcchc17	86	79.470	Xenopus_tropicalis
ENSLOCG00000005280	zcchc17	67	64.740	ENSXCOG00000020147	zcchc17	71	64.162	Xiphophorus_couchianus
ENSLOCG00000005280	zcchc17	67	64.162	ENSXMAG00000002980	zcchc17	69	63.584	Xiphophorus_maculatus