EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005332 (Gene tree)
Gene ID: -
Gene Symbol: scd
Alias: SCD1
Full Name: stearoyl-CoA desaturase (delta-9-desaturase)
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 23575 bases
Position: chrLG5:7436743-7460317
Accession: ZDB-GENE-031106-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006425	MTS	PF05175.14	2.8e-05	1	1
ENSLOCP00000006425	tRNA_U5-meth_tr	PF05958.11	1.1e-08	1	1
ENSLOCP00000006425	Methyltransf_31	PF13847.6	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006433	-	2271	-	ENSLOCP00000006425	756 (aa)	-	W5MDG6

Gene Model

Click here to download ENSLOCG00000005332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005332	scd	56	42.523	ENSLOCG00000002517	trmt2a	68	42.523

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005332	scd	85	67.970	ENSCVAG00000000846	scdb	100	67.970	Cyprinodon_variegatus