EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005487 (Gene tree)
Gene ID: 102690144
Gene Symbol: RBBP6
Alias: P2P-R|PACT|SNAMA
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 16940 bases
Position: chrLG13:10496161-10513100
Accession: 102690144
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006639	zf-CCHC_2	PF13696.6	5e-07	1	1
ENSLOCP00000006619	zf-CCHC_2	PF13696.6	5e-07	1	1
ENSLOCP00000006619	zf-CCHC	PF00098.23	0.00029	1	1
ENSLOCP00000006639	zf-CCHC	PF00098.23	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006627	RBBP6-201	6309	XM_006637262	ENSLOCP00000006619	1812 (aa)	-	W5ME10
ENSLOCT00000006647	RBBP6-202	6276	-	ENSLOCP00000006639	1801 (aa)	-	W5ME30

Gene Model

Click here to download ENSLOCG00000005487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005487's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005487	RBBP6	95	53.873	ENSG00000122257	RBBP6	100	86.333	Homo_sapiens
ENSLOCG00000005487	RBBP6	95	53.459	ENSAMEG00000009312	RBBP6	95	48.994	Ailuropoda_melanoleuca
ENSLOCG00000005487	RBBP6	95	53.930	ENSANAG00000037384	RBBP6	84	70.379	Aotus_nancymaae
ENSLOCG00000005487	RBBP6	95	53.444	ENSBTAG00000009441	RBBP6	98	49.494	Bos_taurus
ENSLOCG00000005487	RBBP6	95	53.414	ENSCJAG00000020661	RBBP6	84	70.379	Callithrix_jacchus
ENSLOCG00000005487	RBBP6	95	54.217	ENSCAFG00000017566	RBBP6	92	51.728	Canis_familiaris
ENSLOCG00000005487	RBBP6	95	53.100	ENSCHIG00000013732	RBBP6	98	50.054	Capra_hircus
ENSLOCG00000005487	RBBP6	95	53.987	ENSTSYG00000000822	RBBP6	78	84.140	Carlito_syrichta
ENSLOCG00000005487	RBBP6	80	67.913	ENSCAPG00000012399	RBBP6	73	68.536	Cavia_aperea
ENSLOCG00000005487	RBBP6	95	51.801	ENSCPOG00000040025	RBBP6	92	49.518	Cavia_porcellus
ENSLOCG00000005487	RBBP6	95	54.102	ENSCCAG00000023229	RBBP6	84	73.274	Cebus_capucinus
ENSLOCG00000005487	RBBP6	95	53.904	ENSCATG00000033601	RBBP6	84	73.661	Cercocebus_atys
ENSLOCG00000005487	RBBP6	95	52.914	ENSCLAG00000009872	RBBP6	92	50.396	Chinchilla_lanigera
ENSLOCG00000005487	RBBP6	61	63.691	ENSCHOG00000000278	RBBP6	60	63.086	Choloepus_hoffmanni
ENSLOCG00000005487	RBBP6	87	66.474	ENSCPBG00000001818	RBBP6	93	66.239	Chrysemys_picta_bellii
ENSLOCG00000005487	RBBP6	95	54.191	ENSCANG00000039613	RBBP6	84	74.107	Colobus_angolensis_palliatus
ENSLOCG00000005487	RBBP6	94	53.306	ENSCGRG00001017193	Rbbp6	92	50.566	Cricetulus_griseus_chok1gshd
ENSLOCG00000005487	RBBP6	94	53.306	ENSCGRG00000011887	Rbbp6	92	50.566	Cricetulus_griseus_crigri
ENSLOCG00000005487	RBBP6	95	54.525	ENSDNOG00000048802	RBBP6	92	51.837	Dasypus_novemcinctus
ENSLOCG00000005487	RBBP6	94	52.754	ENSDORG00000010285	Rbbp6	93	49.436	Dipodomys_ordii
ENSLOCG00000005487	RBBP6	88	56.291	ENSEEUG00000001683	RBBP6	91	52.729	Erinaceus_europaeus
ENSLOCG00000005487	RBBP6	95	54.312	ENSFCAG00000043694	RBBP6	78	83.914	Felis_catus
ENSLOCG00000005487	RBBP6	94	53.523	ENSFALG00000003750	RBBP6	52	45.933	Ficedula_albicollis
ENSLOCG00000005487	RBBP6	94	53.020	ENSFDAG00000013132	RBBP6	92	49.604	Fukomys_damarensis
ENSLOCG00000005487	RBBP6	81	66.294	ENSGALG00000006043	RBBP6	91	66.543	Gallus_gallus
ENSLOCG00000005487	RBBP6	87	66.603	ENSGAGG00000004371	RBBP6	98	66.789	Gopherus_agassizii
ENSLOCG00000005487	RBBP6	95	53.987	ENSGGOG00000007137	RBBP6	84	73.068	Gorilla_gorilla
ENSLOCG00000005487	RBBP6	91	60.296	ENSHGLG00000008327	RBBP6	91	50.000	Heterocephalus_glaber_female
ENSLOCG00000005487	RBBP6	92	53.741	ENSHGLG00100007773	RBBP6	79	53.093	Heterocephalus_glaber_male
ENSLOCG00000005487	RBBP6	94	53.040	ENSJJAG00000014549	Rbbp6	92	49.663	Jaculus_jaculus
ENSLOCG00000005487	RBBP6	95	53.675	ENSLAFG00000009528	RBBP6	92	51.467	Loxodonta_africana
ENSLOCG00000005487	RBBP6	95	53.789	ENSMFAG00000038627	RBBP6	84	73.661	Macaca_fascicularis
ENSLOCG00000005487	RBBP6	95	53.731	ENSMMUG00000015908	RBBP6	84	73.661	Macaca_mulatta
ENSLOCG00000005487	RBBP6	95	53.904	ENSMNEG00000033630	RBBP6	84	73.661	Macaca_nemestrina
ENSLOCG00000005487	RBBP6	95	53.904	ENSMLEG00000030073	RBBP6	84	73.661	Mandrillus_leucophaeus
ENSLOCG00000005487	RBBP6	95	54.327	ENSMICG00000008059	RBBP6	78	83.602	Microcebus_murinus
ENSLOCG00000005487	RBBP6	95	51.724	ENSMODG00000016318	-	94	56.718	Monodelphis_domestica
ENSLOCG00000005487	RBBP6	66	61.957	MGP_CAROLIEiJ_G0030424	-	96	62.198	Mus_caroli
ENSLOCG00000005487	RBBP6	94	54.060	ENSMUSG00000030779	Rbbp6	95	49.917	Mus_musculus
ENSLOCG00000005487	RBBP6	94	53.302	MGP_PahariEiJ_G0013634	Rbbp6	92	50.564	Mus_pahari
ENSLOCG00000005487	RBBP6	95	53.846	MGP_SPRETEiJ_G0031538	Rbbp6	92	51.076	Mus_spretus
ENSLOCG00000005487	RBBP6	62	47.084	ENSMPUG00000012318	RBBP6	95	48.282	Mustela_putorius_furo
ENSLOCG00000005487	RBBP6	95	53.406	ENSMLUG00000010601	-	92	51.669	Myotis_lucifugus
ENSLOCG00000005487	RBBP6	94	53.248	ENSNGAG00000002381	Rbbp6	92	50.707	Nannospalax_galili
ENSLOCG00000005487	RBBP6	91	62.658	ENSNLEG00000011896	RBBP6	84	73.438	Nomascus_leucogenys
ENSLOCG00000005487	RBBP6	84	52.950	ENSMEUG00000014491	RBBP6	79	51.627	Notamacropus_eugenii
ENSLOCG00000005487	RBBP6	52	77.487	ENSOPRG00000016272	RBBP6	50	77.749	Ochotona_princeps
ENSLOCG00000005487	RBBP6	94	52.747	ENSODEG00000012319	RBBP6	95	47.993	Octodon_degus
ENSLOCG00000005487	RBBP6	95	53.234	ENSOCUG00000004346	RBBP6	94	51.694	Oryctolagus_cuniculus
ENSLOCG00000005487	RBBP6	95	53.157	ENSOARG00000017741	RBBP6	98	49.707	Ovis_aries
ENSLOCG00000005487	RBBP6	95	54.198	ENSPPRG00000004074	RBBP6	78	83.914	Panthera_pardus
ENSLOCG00000005487	RBBP6	95	54.312	ENSPTIG00000010342	RBBP6	78	83.914	Panthera_tigris_altaica
ENSLOCG00000005487	RBBP6	95	53.815	ENSPTRG00000007897	RBBP6	84	73.661	Pan_troglodytes
ENSLOCG00000005487	RBBP6	95	53.904	ENSPANG00000019625	RBBP6	84	73.661	Papio_anubis
ENSLOCG00000005487	RBBP6	56	56.767	ENSPKIG00000018682	RBBP6	95	60.921	Paramormyrops_kingsleyae
ENSLOCG00000005487	RBBP6	95	51.642	ENSPSIG00000004108	RBBP6	59	47.659	Pelodiscus_sinensis
ENSLOCG00000005487	RBBP6	95	54.071	ENSPCOG00000021939	RBBP6	78	83.378	Propithecus_coquereli
ENSLOCG00000005487	RBBP6	82	59.644	ENSPVAG00000001110	RBBP6	81	55.524	Pteropus_vampyrus
ENSLOCG00000005487	RBBP6	95	53.649	ENSRNOG00000012806	Rbbp6	92	51.131	Rattus_norvegicus
ENSLOCG00000005487	RBBP6	91	57.527	ENSRBIG00000004517	RBBP6	85	68.304	Rhinopithecus_bieti
ENSLOCG00000005487	RBBP6	95	53.904	ENSRROG00000032092	RBBP6	84	73.661	Rhinopithecus_roxellana
ENSLOCG00000005487	RBBP6	95	53.643	ENSSBOG00000021666	RBBP6	84	70.379	Saimiri_boliviensis_boliviensis
ENSLOCG00000005487	RBBP6	90	50.909	ENSSARG00000004977	RBBP6	87	59.046	Sorex_araneus
ENSLOCG00000005487	RBBP6	95	53.528	ENSSSCG00000007830	RBBP6	92	51.018	Sus_scrofa
ENSLOCG00000005487	RBBP6	92	52.476	ENSTGUG00000006185	RBBP6	53	45.563	Taeniopygia_guttata
ENSLOCG00000005487	RBBP6	98	51.834	ENSTTRG00000002696	RBBP6	92	49.660	Tursiops_truncatus
ENSLOCG00000005487	RBBP6	95	53.211	ENSUMAG00000008537	RBBP6	95	48.364	Ursus_maritimus
ENSLOCG00000005487	RBBP6	65	84.082	ENSVPAG00000006458	RBBP6	79	51.079	Vicugna_pacos
ENSLOCG00000005487	RBBP6	95	54.217	ENSVVUG00000005484	RBBP6	92	51.728	Vulpes_vulpes