EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005492 (Gene tree)
Gene ID: 102696062
Gene Symbol: lyn
Alias: zgc:92124
Full Name: trimethylguanosine synthase 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 42430 bases
Position: chrLG9:8837110-8879539
Accession: 102696062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006650	Methyltransf_15	PF09445.10	2.7e-42	1	1
ENSLOCP00000006629	Methyltransf_15	PF09445.10	4.7e-42	1	1
ENSLOCP00000006629	UPF0020	PF01170.18	2.8e-07	1	1
ENSLOCP00000006650	UPF0020	PF01170.18	3.5e-07	1	1
ENSLOCP00000006629	Met_10	PF02475.16	9.6e-08	1	1
ENSLOCP00000006650	Met_10	PF02475.16	1.1e-07	1	1
ENSLOCP00000006629	Methyltransf_31	PF13847.6	4.1e-07	1	1
ENSLOCP00000006650	Methyltransf_31	PF13847.6	4.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006637	-	2605	-	ENSLOCP00000006629	701 (aa)	-	W5ME20
ENSLOCT00000006658	-	2458	XM_006634022	ENSLOCP00000006650	811 (aa)	XP_015209026	W5ME41

Gene Model

Click here to download ENSLOCG00000005492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005492's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005492	lyn	95	46.120	ENSG00000137574	TGS1	99	40.914	Homo_sapiens
ENSLOCG00000005492	lyn	82	39.394	ENSAPOG00000004321	-	99	39.731	Acanthochromis_polyacanthus
ENSLOCG00000005492	lyn	99	41.887	ENSAMEG00000001781	TGS1	99	41.876	Ailuropoda_melanoleuca
ENSLOCG00000005492	lyn	98	38.764	ENSAOCG00000022799	lyn	83	76.498	Amphiprion_ocellaris
ENSLOCG00000005492	lyn	95	41.525	ENSAPEG00000019723	TGS1	77	76.498	Amphiprion_percula
ENSLOCG00000005492	lyn	91	36.765	ENSATEG00000005927	lyn	91	36.752	Anabas_testudineus
ENSLOCG00000005492	lyn	90	43.971	ENSAPLG00000006073	-	94	43.787	Anas_platyrhynchos
ENSLOCG00000005492	lyn	95	43.994	ENSACAG00000017988	TGS1	92	40.000	Anolis_carolinensis
ENSLOCG00000005492	lyn	95	44.833	ENSANAG00000035525	TGS1	87	79.907	Aotus_nancymaae
ENSLOCG00000005492	lyn	97	44.928	ENSACLG00000000261	lyn	99	41.746	Astatotilapia_calliptera
ENSLOCG00000005492	lyn	95	47.423	ENSAMXG00000014086	lyn	98	43.843	Astyanax_mexicanus
ENSLOCG00000005492	lyn	99	41.744	ENSBTAG00000005898	TGS1	99	41.657	Bos_taurus
ENSLOCG00000005492	lyn	95	46.939	ENSCJAG00000016657	TGS1	98	42.593	Callithrix_jacchus
ENSLOCG00000005492	lyn	95	46.366	ENSCAFG00000007011	TGS1	76	46.377	Canis_familiaris
ENSLOCG00000005492	lyn	95	45.058	ENSCAFG00020015485	TGS1	76	45.072	Canis_lupus_dingo
ENSLOCG00000005492	lyn	99	41.512	ENSCHIG00000013976	TGS1	99	41.522	Capra_hircus
ENSLOCG00000005492	lyn	95	46.176	ENSTSYG00000000171	TGS1	99	42.019	Carlito_syrichta
ENSLOCG00000005492	lyn	96	44.718	ENSCAPG00000013732	TGS1	94	42.257	Cavia_aperea
ENSLOCG00000005492	lyn	96	45.269	ENSCPOG00000009713	TGS1	99	42.222	Cavia_porcellus
ENSLOCG00000005492	lyn	95	46.512	ENSCCAG00000030476	TGS1	75	46.143	Cebus_capucinus
ENSLOCG00000005492	lyn	99	43.398	ENSCATG00000035375	TGS1	76	45.942	Cercocebus_atys
ENSLOCG00000005492	lyn	99	42.105	ENSCLAG00000009468	TGS1	99	41.822	Chinchilla_lanigera
ENSLOCG00000005492	lyn	92	39.438	ENSCSAG00000014611	TGS1	75	41.824	Chlorocebus_sabaeus
ENSLOCG00000005492	lyn	99	39.748	ENSCHOG00000001462	TGS1	77	42.525	Choloepus_hoffmanni
ENSLOCG00000005492	lyn	95	46.552	ENSCPBG00000004958	TGS1	77	46.983	Chrysemys_picta_bellii
ENSLOCG00000005492	lyn	95	46.120	ENSCANG00000041389	TGS1	76	44.557	Colobus_angolensis_palliatus
ENSLOCG00000005492	lyn	99	41.218	ENSCGRG00001019470	Tgs1	99	41.136	Cricetulus_griseus_chok1gshd
ENSLOCG00000005492	lyn	95	44.883	ENSCGRG00000008981	Tgs1	76	44.706	Cricetulus_griseus_crigri
ENSLOCG00000005492	lyn	98	44.264	ENSDARG00000107511	lyn	99	81.111	Danio_rerio
ENSLOCG00000005492	lyn	99	43.070	ENSDNOG00000008353	TGS1	62	32.554	Dasypus_novemcinctus
ENSLOCG00000005492	lyn	98	42.500	ENSDORG00000012484	Tgs1	99	41.647	Dipodomys_ordii
ENSLOCG00000005492	lyn	84	40.000	ENSETEG00000005126	TGS1	85	41.237	Echinops_telfairi
ENSLOCG00000005492	lyn	92	39.237	ENSEASG00005016371	TGS1	95	39.390	Equus_asinus_asinus
ENSLOCG00000005492	lyn	99	42.431	ENSECAG00000019399	TGS1	99	42.449	Equus_caballus
ENSLOCG00000005492	lyn	72	83.636	ENSEEUG00000001735	TGS1	70	84.375	Erinaceus_europaeus
ENSLOCG00000005492	lyn	97	46.528	ENSELUG00000012537	lyn	90	73.684	Esox_lucius
ENSLOCG00000005492	lyn	99	41.772	ENSFCAG00000011478	TGS1	99	41.991	Felis_catus
ENSLOCG00000005492	lyn	95	45.874	ENSFALG00000010249	TGS1	89	70.611	Ficedula_albicollis
ENSLOCG00000005492	lyn	99	42.389	ENSFDAG00000011405	TGS1	99	42.191	Fukomys_damarensis
ENSLOCG00000005492	lyn	98	46.279	ENSGALG00000015340	TGS1	99	42.506	Gallus_gallus
ENSLOCG00000005492	lyn	95	44.759	ENSGAGG00000019590	TGS1	99	40.376	Gopherus_agassizii
ENSLOCG00000005492	lyn	96	46.165	ENSGGOG00000008624	TGS1	77	45.429	Gorilla_gorilla
ENSLOCG00000005492	lyn	86	38.231	ENSHBUG00000003518	lyn	100	39.966	Haplochromis_burtoni
ENSLOCG00000005492	lyn	84	72.727	ENSHGLG00000000284	TGS1	94	86.275	Heterocephalus_glaber_female
ENSLOCG00000005492	lyn	98	42.706	ENSHCOG00000014161	lyn	99	42.421	Hippocampus_comes
ENSLOCG00000005492	lyn	95	46.579	ENSIPUG00000002294	tgs1	99	41.676	Ictalurus_punctatus
ENSLOCG00000005492	lyn	99	41.822	ENSJJAG00000016239	Tgs1	99	41.231	Jaculus_jaculus
ENSLOCG00000005492	lyn	87	76.037	ENSKMAG00000019371	-	99	37.729	Kryptolebias_marmoratus
ENSLOCG00000005492	lyn	97	45.612	ENSLBEG00000027341	-	99	43.721	Labrus_bergylta
ENSLOCG00000005492	lyn	95	48.169	ENSLACG00000008074	TGS1	100	42.729	Latimeria_chalumnae
ENSLOCG00000005492	lyn	95	44.428	ENSLAFG00000015386	TGS1	76	44.380	Loxodonta_africana
ENSLOCG00000005492	lyn	99	42.299	ENSMFAG00000029838	TGS1	77	44.993	Macaca_fascicularis
ENSLOCG00000005492	lyn	95	45.388	ENSMMUG00000005478	TGS1	76	44.122	Macaca_mulatta
ENSLOCG00000005492	lyn	95	46.413	ENSMNEG00000023719	TGS1	77	45.138	Macaca_nemestrina
ENSLOCG00000005492	lyn	99	42.939	ENSMLEG00000034807	TGS1	76	46.210	Mandrillus_leucophaeus
ENSLOCG00000005492	lyn	97	45.480	ENSMAMG00000009542	TGS1	99	43.105	Mastacembelus_armatus
ENSLOCG00000005492	lyn	97	44.928	ENSMZEG00005015681	lyn	99	41.726	Maylandia_zebra
ENSLOCG00000005492	lyn	98	45.868	ENSMGAG00000010966	TGS1	92	45.379	Meleagris_gallopavo
ENSLOCG00000005492	lyn	99	41.667	ENSMAUG00000009875	Tgs1	86	80.841	Mesocricetus_auratus
ENSLOCG00000005492	lyn	99	42.578	ENSMICG00000011199	TGS1	76	46.522	Microcebus_murinus
ENSLOCG00000005492	lyn	99	41.648	ENSMOCG00000019560	Tgs1	99	41.947	Microtus_ochrogaster
ENSLOCG00000005492	lyn	72	49.011	ENSMMOG00000021495	lyn	92	49.203	Mola_mola
ENSLOCG00000005492	lyn	95	45.007	ENSMODG00000009174	TGS1	87	46.280	Monodelphis_domestica
ENSLOCG00000005492	lyn	88	41.220	ENSMALG00000021440	lyn	99	41.074	Monopterus_albus
ENSLOCG00000005492	lyn	99	41.088	MGP_CAROLIEiJ_G0025779	-	98	40.830	Mus_caroli
ENSLOCG00000005492	lyn	99	36.842	MGP_CAROLIEiJ_G0025780	-	98	36.939	Mus_caroli
ENSLOCG00000005492	lyn	99	41.404	ENSMUSG00000028233	Tgs1	98	39.699	Mus_musculus
ENSLOCG00000005492	lyn	99	38.084	MGP_PahariEiJ_G0023902	-	98	38.106	Mus_pahari
ENSLOCG00000005492	lyn	99	42.099	MGP_PahariEiJ_G0023901	-	98	41.869	Mus_pahari
ENSLOCG00000005492	lyn	52	71.759	MGP_SPRETEiJ_G0026726	-	78	71.759	Mus_spretus
ENSLOCG00000005492	lyn	99	41.637	MGP_SPRETEiJ_G0026727	-	98	41.053	Mus_spretus
ENSLOCG00000005492	lyn	92	39.163	ENSMPUG00000010475	TGS1	99	39.173	Mustela_putorius_furo
ENSLOCG00000005492	lyn	99	42.117	ENSMLUG00000014857	TGS1	99	42.014	Myotis_lucifugus
ENSLOCG00000005492	lyn	99	42.578	ENSNGAG00000019532	Tgs1	99	42.808	Nannospalax_galili
ENSLOCG00000005492	lyn	95	46.266	ENSNLEG00000001101	TGS1	76	45.520	Nomascus_leucogenys
ENSLOCG00000005492	lyn	95	44.088	ENSMEUG00000001697	TGS1	98	42.394	Notamacropus_eugenii
ENSLOCG00000005492	lyn	90	44.290	ENSODEG00000002948	TGS1	97	41.169	Octodon_degus
ENSLOCG00000005492	lyn	96	47.016	ENSONIG00000006339	lyn	99	42.932	Oreochromis_niloticus
ENSLOCG00000005492	lyn	95	45.507	ENSOANG00000021853	TGS1	98	42.839	Ornithorhynchus_anatinus
ENSLOCG00000005492	lyn	96	45.058	ENSOCUG00000017522	TGS1	99	41.928	Oryctolagus_cuniculus
ENSLOCG00000005492	lyn	99	36.848	ENSORLG00000004299	lyn	81	49.670	Oryzias_latipes
ENSLOCG00000005492	lyn	99	36.878	ENSORLG00020004200	lyn	82	49.451	Oryzias_latipes_hni
ENSLOCG00000005492	lyn	95	41.185	ENSORLG00015007251	lyn	98	40.100	Oryzias_latipes_hsok
ENSLOCG00000005492	lyn	99	40.993	ENSOMEG00000020174	lyn	99	41.237	Oryzias_melastigma
ENSLOCG00000005492	lyn	99	42.428	ENSOGAG00000012572	TGS1	99	41.590	Otolemur_garnettii
ENSLOCG00000005492	lyn	99	40.883	ENSOARG00000014613	TGS1	99	41.197	Ovis_aries
ENSLOCG00000005492	lyn	99	42.135	ENSPPAG00000039058	TGS1	99	41.906	Pan_paniscus
ENSLOCG00000005492	lyn	99	41.935	ENSPPRG00000000677	TGS1	77	45.217	Panthera_pardus
ENSLOCG00000005492	lyn	99	41.657	ENSPTIG00000005122	TGS1	77	45.007	Panthera_tigris_altaica
ENSLOCG00000005492	lyn	95	46.131	ENSPTRG00000020262	TGS1	76	45.520	Pan_troglodytes
ENSLOCG00000005492	lyn	99	42.824	ENSPANG00000018910	TGS1	76	45.652	Papio_anubis
ENSLOCG00000005492	lyn	95	44.721	ENSPKIG00000005454	lyn	78	46.789	Paramormyrops_kingsleyae
ENSLOCG00000005492	lyn	96	45.532	ENSPSIG00000014983	TGS1	90	72.727	Pelodiscus_sinensis
ENSLOCG00000005492	lyn	60	70.588	ENSPMGG00000012711	lyn	71	76.147	Periophthalmus_magnuspinnatus
ENSLOCG00000005492	lyn	99	43.593	ENSPCIG00000016232	TGS1	98	42.166	Phascolarctos_cinereus
ENSLOCG00000005492	lyn	95	41.917	ENSPFOG00000001545	-	83	41.218	Poecilia_formosa
ENSLOCG00000005492	lyn	91	36.742	ENSPREG00000012261	-	99	36.536	Poecilia_reticulata
ENSLOCG00000005492	lyn	95	46.120	ENSPPYG00000018597	TGS1	77	45.231	Pongo_abelii
ENSLOCG00000005492	lyn	99	42.294	ENSPCAG00000000143	TGS1	99	42.063	Procavia_capensis
ENSLOCG00000005492	lyn	99	42.227	ENSPCOG00000013537	TGS1	99	41.820	Propithecus_coquereli
ENSLOCG00000005492	lyn	90	79.091	ENSPVAG00000016399	TGS1	86	80.841	Pteropus_vampyrus
ENSLOCG00000005492	lyn	97	43.803	ENSPNYG00000023004	lyn	90	42.317	Pundamilia_nyererei
ENSLOCG00000005492	lyn	98	45.539	ENSPNAG00000022249	lyn	99	44.755	Pygocentrus_nattereri
ENSLOCG00000005492	lyn	99	42.227	ENSRNOG00000008156	Tgs1	76	44.088	Rattus_norvegicus
ENSLOCG00000005492	lyn	99	41.327	ENSRBIG00000041893	TGS1	99	40.978	Rhinopithecus_bieti
ENSLOCG00000005492	lyn	99	42.135	ENSRROG00000035127	TGS1	99	42.317	Rhinopithecus_roxellana
ENSLOCG00000005492	lyn	95	40.785	ENSSBOG00000024469	TGS1	99	40.719	Saimiri_boliviensis_boliviensis
ENSLOCG00000005492	lyn	99	43.814	ENSSHAG00000012878	TGS1	98	43.693	Sarcophilus_harrisii
ENSLOCG00000005492	lyn	95	48.060	ENSSFOG00015001308	tgs1	100	43.082	Scleropages_formosus
ENSLOCG00000005492	lyn	97	44.770	ENSSMAG00000019469	lyn	100	41.752	Scophthalmus_maximus
ENSLOCG00000005492	lyn	66	77.533	ENSSLDG00000009024	lyn	77	78.222	Seriola_lalandi_dorsalis
ENSLOCG00000005492	lyn	90	66.816	ENSSPAG00000002170	lyn	84	65.919	Stegastes_partitus
ENSLOCG00000005492	lyn	89	39.157	ENSSSCG00000006251	TGS1	98	38.733	Sus_scrofa
ENSLOCG00000005492	lyn	73	64.231	ENSTRUG00000009532	lyn	73	64.231	Takifugu_rubripes
ENSLOCG00000005492	lyn	76	66.058	ENSTNIG00000018133	lyn	79	67.279	Tetraodon_nigroviridis
ENSLOCG00000005492	lyn	83	83.636	ENSTBEG00000010953	TGS1	84	83.636	Tupaia_belangeri
ENSLOCG00000005492	lyn	95	44.792	ENSTTRG00000017239	TGS1	76	45.889	Tursiops_truncatus
ENSLOCG00000005492	lyn	99	41.332	ENSUAMG00000027718	TGS1	99	41.102	Ursus_americanus
ENSLOCG00000005492	lyn	92	39.066	ENSUMAG00000009761	TGS1	99	38.821	Ursus_maritimus
ENSLOCG00000005492	lyn	95	41.931	ENSVPAG00000001166	TGS1	80	42.939	Vicugna_pacos
ENSLOCG00000005492	lyn	92	38.084	ENSVVUG00000017821	TGS1	75	42.834	Vulpes_vulpes
ENSLOCG00000005492	lyn	99	41.163	ENSXETG00000005648	tgs1	99	40.782	Xenopus_tropicalis