EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005597 (Gene tree)
Gene ID: 102694255
Gene Symbol: pop4
Alias: zgc:110597
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 4270 bases
Position: chrLG23:11305617-11309886
Accession: 102694255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006758	UPF0086	PF01868.16	9.4e-28	1	1
ENSLOCP00000006780	UPF0086	PF01868.16	9.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006766	-	1875	-	ENSLOCP00000006758	220 (aa)	XP_015223867	W5MEE9
ENSLOCT00000006788	-	1875	XM_006641436	ENSLOCP00000006780	220 (aa)	-	W5MEH1

Gene Model

Click here to download ENSLOCG00000005597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005597	pop4	100	69.091	ENSG00000105171	POP4	100	86.458	Homo_sapiens
ENSLOCG00000005597	pop4	99	68.664	ENSAMEG00000018329	-	99	68.664	Ailuropoda_melanoleuca
ENSLOCG00000005597	pop4	97	60.465	ENSAMEG00000003172	-	97	60.465	Ailuropoda_melanoleuca
ENSLOCG00000005597	pop4	99	64.384	ENSACIG00000008358	pop4	99	64.384	Amphilophus_citrinellus
ENSLOCG00000005597	pop4	90	66.169	ENSAOCG00000010116	pop4	98	65.672	Amphiprion_ocellaris
ENSLOCG00000005597	pop4	99	62.896	ENSAPEG00000002829	pop4	93	62.443	Amphiprion_percula
ENSLOCG00000005597	pop4	100	64.414	ENSATEG00000013028	pop4	100	63.964	Anabas_testudineus
ENSLOCG00000005597	pop4	92	70.792	ENSAPLG00000014051	POP4	98	70.792	Anas_platyrhynchos
ENSLOCG00000005597	pop4	100	70.000	ENSANAG00000020295	POP4	100	70.000	Aotus_nancymaae
ENSLOCG00000005597	pop4	99	63.348	ENSACLG00000000526	pop4	99	62.557	Astatotilapia_calliptera
ENSLOCG00000005597	pop4	97	71.963	ENSAMXG00000002899	pop4	97	71.963	Astyanax_mexicanus
ENSLOCG00000005597	pop4	100	71.818	ENSBTAG00000002223	POP4	100	71.818	Bos_taurus
ENSLOCG00000005597	pop4	65	30.345	WBGene00007603	C15C6.4	57	31.624	Caenorhabditis_elegans
ENSLOCG00000005597	pop4	100	68.326	ENSCJAG00000046750	POP4	99	74.725	Callithrix_jacchus
ENSLOCG00000005597	pop4	83	73.077	ENSCAFG00000007630	POP4	100	73.077	Canis_familiaris
ENSLOCG00000005597	pop4	100	69.545	ENSCHIG00000016743	POP4	100	69.545	Capra_hircus
ENSLOCG00000005597	pop4	100	68.182	ENSTSYG00000003488	POP4	100	68.182	Carlito_syrichta
ENSLOCG00000005597	pop4	99	50.230	ENSCAPG00000011105	POP4	100	50.230	Cavia_aperea
ENSLOCG00000005597	pop4	100	66.818	ENSCPOG00000002992	POP4	100	66.818	Cavia_porcellus
ENSLOCG00000005597	pop4	100	69.091	ENSCCAG00000020285	-	100	69.091	Cebus_capucinus
ENSLOCG00000005597	pop4	100	59.545	ENSCCAG00000034244	-	100	59.545	Cebus_capucinus
ENSLOCG00000005597	pop4	100	69.545	ENSCATG00000036022	POP4	100	87.500	Cercocebus_atys
ENSLOCG00000005597	pop4	100	66.818	ENSCLAG00000013162	POP4	100	66.818	Chinchilla_lanigera
ENSLOCG00000005597	pop4	99	70.046	ENSCSAG00000004868	POP4	99	70.046	Chlorocebus_sabaeus
ENSLOCG00000005597	pop4	99	53.456	ENSCHOG00000002071	POP4	100	53.456	Choloepus_hoffmanni
ENSLOCG00000005597	pop4	100	75.000	ENSCPBG00000016132	POP4	100	75.000	Chrysemys_picta_bellii
ENSLOCG00000005597	pop4	84	32.461	ENSCING00000023871	-	94	32.461	Ciona_intestinalis
ENSLOCG00000005597	pop4	90	74.112	ENSCANG00000005924	POP4	98	74.112	Colobus_angolensis_palliatus
ENSLOCG00000005597	pop4	100	68.182	ENSCGRG00001017185	Pop4	100	68.182	Cricetulus_griseus_chok1gshd
ENSLOCG00000005597	pop4	100	68.182	ENSCGRG00000008155	Pop4	100	68.182	Cricetulus_griseus_crigri
ENSLOCG00000005597	pop4	99	55.505	ENSCSEG00000002946	pop4	99	55.505	Cynoglossus_semilaevis
ENSLOCG00000005597	pop4	99	47.059	ENSCVAG00000018602	POP4	95	47.059	Cyprinodon_variegatus
ENSLOCG00000005597	pop4	100	69.231	ENSDARG00000101472	pop4	100	68.636	Danio_rerio
ENSLOCG00000005597	pop4	100	69.545	ENSDNOG00000047663	POP4	88	69.545	Dasypus_novemcinctus
ENSLOCG00000005597	pop4	78	62.573	ENSDORG00000008577	Pop4	98	63.690	Dipodomys_ordii
ENSLOCG00000005597	pop4	67	32.903	FBgn0035831	CG8038	64	36.364	Drosophila_melanogaster
ENSLOCG00000005597	pop4	99	57.143	ENSETEG00000003607	POP4	100	57.143	Echinops_telfairi
ENSLOCG00000005597	pop4	100	40.271	ENSEBUG00000008575	pop4	99	40.367	Eptatretus_burgeri
ENSLOCG00000005597	pop4	90	40.284	ENSEBUG00000004305	pop4	92	39.810	Eptatretus_burgeri
ENSLOCG00000005597	pop4	91	45.794	ENSEBUG00000010447	pop4	83	45.794	Eptatretus_burgeri
ENSLOCG00000005597	pop4	100	82.692	ENSECAG00000020206	POP4	82	82.692	Equus_caballus
ENSLOCG00000005597	pop4	90	54.822	ENSEEUG00000013109	POP4	99	54.822	Erinaceus_europaeus
ENSLOCG00000005597	pop4	100	68.636	ENSELUG00000019812	pop4	100	68.182	Esox_lucius
ENSLOCG00000005597	pop4	100	68.182	ENSFCAG00000001619	POP4	100	68.182	Felis_catus
ENSLOCG00000005597	pop4	96	69.340	ENSFALG00000000206	POP4	95	69.340	Ficedula_albicollis
ENSLOCG00000005597	pop4	100	68.182	ENSFDAG00000017859	POP4	100	68.182	Fukomys_damarensis
ENSLOCG00000005597	pop4	98	56.422	ENSFHEG00000012745	pop4	98	55.963	Fundulus_heteroclitus
ENSLOCG00000005597	pop4	90	64.677	ENSGMOG00000000335	pop4	99	64.179	Gadus_morhua
ENSLOCG00000005597	pop4	100	67.273	ENSGALG00000041972	POP4	92	67.273	Gallus_gallus
ENSLOCG00000005597	pop4	79	53.107	ENSGAFG00000003571	pop4	98	53.107	Gambusia_affinis
ENSLOCG00000005597	pop4	99	62.557	ENSGACG00000014510	pop4	98	62.844	Gasterosteus_aculeatus
ENSLOCG00000005597	pop4	100	74.545	ENSGAGG00000024544	POP4	79	74.545	Gopherus_agassizii
ENSLOCG00000005597	pop4	99	70.046	ENSGGOG00000038346	POP4	99	70.046	Gorilla_gorilla
ENSLOCG00000005597	pop4	99	62.443	ENSHBUG00000021821	pop4	99	61.644	Haplochromis_burtoni
ENSLOCG00000005597	pop4	99	67.742	ENSHGLG00000015798	POP4	99	67.742	Heterocephalus_glaber_female
ENSLOCG00000005597	pop4	99	67.890	ENSHGLG00100009737	POP4	99	67.890	Heterocephalus_glaber_male
ENSLOCG00000005597	pop4	99	62.385	ENSHCOG00000020937	pop4	99	62.273	Hippocampus_comes
ENSLOCG00000005597	pop4	100	66.818	ENSIPUG00000013652	pop4	100	66.818	Ictalurus_punctatus
ENSLOCG00000005597	pop4	100	69.091	ENSSTOG00000011016	POP4	100	69.091	Ictidomys_tridecemlineatus
ENSLOCG00000005597	pop4	100	67.273	ENSJJAG00000013376	Pop4	100	67.273	Jaculus_jaculus
ENSLOCG00000005597	pop4	99	62.896	ENSKMAG00000012250	pop4	99	62.896	Kryptolebias_marmoratus
ENSLOCG00000005597	pop4	99	61.991	ENSLBEG00000018846	-	99	61.086	Labrus_bergylta
ENSLOCG00000005597	pop4	99	61.991	ENSLBEG00000014139	pop4	99	61.086	Labrus_bergylta
ENSLOCG00000005597	pop4	100	68.636	ENSLACG00000008581	POP4	99	68.636	Latimeria_chalumnae
ENSLOCG00000005597	pop4	100	67.727	ENSLAFG00000000084	POP4	100	67.727	Loxodonta_africana
ENSLOCG00000005597	pop4	100	69.545	ENSMFAG00000029606	POP4	100	69.545	Macaca_fascicularis
ENSLOCG00000005597	pop4	100	69.369	ENSMMUG00000017424	POP4	100	68.778	Macaca_mulatta
ENSLOCG00000005597	pop4	100	69.820	ENSMNEG00000031374	POP4	100	69.231	Macaca_nemestrina
ENSLOCG00000005597	pop4	100	69.545	ENSMLEG00000043454	POP4	100	69.545	Mandrillus_leucophaeus
ENSLOCG00000005597	pop4	99	64.706	ENSMAMG00000011716	pop4	99	64.253	Mastacembelus_armatus
ENSLOCG00000005597	pop4	99	63.348	ENSMZEG00005002360	pop4	99	62.557	Maylandia_zebra
ENSLOCG00000005597	pop4	99	69.124	ENSMGAG00000005337	POP4	97	69.124	Meleagris_gallopavo
ENSLOCG00000005597	pop4	100	67.727	ENSMAUG00000020110	Pop4	100	67.727	Mesocricetus_auratus
ENSLOCG00000005597	pop4	99	66.820	ENSMICG00000035730	POP4	97	67.130	Microcebus_murinus
ENSLOCG00000005597	pop4	99	63.927	ENSMMOG00000015321	pop4	99	63.927	Mola_mola
ENSLOCG00000005597	pop4	99	68.950	ENSMODG00000029406	POP4	95	68.950	Monodelphis_domestica
ENSLOCG00000005597	pop4	99	65.297	ENSMALG00000012571	pop4	99	65.297	Monopterus_albus
ENSLOCG00000005597	pop4	100	65.766	MGP_CAROLIEiJ_G0029600	Pop4	100	64.706	Mus_caroli
ENSLOCG00000005597	pop4	100	65.766	ENSMUSG00000030423	Pop4	100	64.706	Mus_musculus
ENSLOCG00000005597	pop4	100	65.909	MGP_SPRETEiJ_G0030699	Pop4	100	65.909	Mus_spretus
ENSLOCG00000005597	pop4	100	68.636	ENSMPUG00000008041	-	100	68.636	Mustela_putorius_furo
ENSLOCG00000005597	pop4	100	59.276	ENSMPUG00000008063	-	100	59.276	Mustela_putorius_furo
ENSLOCG00000005597	pop4	99	54.128	ENSMLUG00000010774	POP4	99	54.128	Myotis_lucifugus
ENSLOCG00000005597	pop4	57	78.400	ENSMEUG00000003636	-	100	78.400	Notamacropus_eugenii
ENSLOCG00000005597	pop4	90	73.096	ENSOPRG00000004736	POP4	99	73.096	Ochotona_princeps
ENSLOCG00000005597	pop4	99	67.742	ENSODEG00000013025	POP4	99	69.856	Octodon_degus
ENSLOCG00000005597	pop4	99	62.100	ENSONIG00000003458	pop4	97	62.100	Oreochromis_niloticus
ENSLOCG00000005597	pop4	100	69.091	ENSOCUG00000015974	POP4	100	69.091	Oryctolagus_cuniculus
ENSLOCG00000005597	pop4	99	61.538	ENSORLG00000020317	pop4	99	60.633	Oryzias_latipes
ENSLOCG00000005597	pop4	99	60.633	ENSORLG00015011624	pop4	99	59.729	Oryzias_latipes_hsok
ENSLOCG00000005597	pop4	98	61.927	ENSOMEG00000002538	pop4	98	61.468	Oryzias_melastigma
ENSLOCG00000005597	pop4	99	68.203	ENSOGAG00000011168	POP4	99	68.203	Otolemur_garnettii
ENSLOCG00000005597	pop4	100	69.231	ENSOARG00000004041	POP4	100	69.231	Ovis_aries
ENSLOCG00000005597	pop4	100	69.545	ENSPPAG00000040372	POP4	100	69.545	Pan_paniscus
ENSLOCG00000005597	pop4	100	68.182	ENSPPRG00000010502	POP4	100	68.182	Panthera_pardus
ENSLOCG00000005597	pop4	100	68.182	ENSPTIG00000016598	POP4	100	68.182	Panthera_tigris_altaica
ENSLOCG00000005597	pop4	100	69.545	ENSPTRG00000010779	POP4	100	69.545	Pan_troglodytes
ENSLOCG00000005597	pop4	100	69.545	ENSPANG00000008546	POP4	100	69.545	Papio_anubis
ENSLOCG00000005597	pop4	91	74.877	ENSPKIG00000004468	pop4	89	74.384	Paramormyrops_kingsleyae
ENSLOCG00000005597	pop4	100	75.000	ENSPSIG00000015690	POP4	100	78.218	Pelodiscus_sinensis
ENSLOCG00000005597	pop4	90	58.824	ENSPMGG00000008608	pop4	98	59.314	Periophthalmus_magnuspinnatus
ENSLOCG00000005597	pop4	99	57.143	ENSPEMG00000019982	-	99	57.143	Peromyscus_maniculatus_bairdii
ENSLOCG00000005597	pop4	100	65.909	ENSPEMG00000014034	-	95	68.396	Peromyscus_maniculatus_bairdii
ENSLOCG00000005597	pop4	83	53.030	ENSPMAG00000006265	pop4	100	52.525	Petromyzon_marinus
ENSLOCG00000005597	pop4	100	67.727	ENSPCIG00000024738	POP4	95	67.727	Phascolarctos_cinereus
ENSLOCG00000005597	pop4	99	60.909	ENSPFOG00000000925	pop4	99	60.909	Poecilia_formosa
ENSLOCG00000005597	pop4	99	60.909	ENSPLAG00000003161	pop4	99	60.909	Poecilia_latipinna
ENSLOCG00000005597	pop4	99	60.909	ENSPMEG00000002475	pop4	99	60.909	Poecilia_mexicana
ENSLOCG00000005597	pop4	99	60.000	ENSPREG00000022403	pop4	93	60.000	Poecilia_reticulata
ENSLOCG00000005597	pop4	100	70.000	ENSPPYG00000009805	POP4	100	70.000	Pongo_abelii
ENSLOCG00000005597	pop4	99	65.899	ENSPCAG00000007737	POP4	99	65.899	Procavia_capensis
ENSLOCG00000005597	pop4	100	66.818	ENSPCOG00000018055	POP4	100	66.818	Propithecus_coquereli
ENSLOCG00000005597	pop4	100	67.273	ENSPVAG00000006069	POP4	100	67.273	Pteropus_vampyrus
ENSLOCG00000005597	pop4	99	62.896	ENSPNYG00000020038	pop4	99	62.100	Pundamilia_nyererei
ENSLOCG00000005597	pop4	100	67.727	ENSPNAG00000005591	pop4	100	67.727	Pygocentrus_nattereri
ENSLOCG00000005597	pop4	100	65.766	ENSRNOG00000027646	Pop4	100	64.706	Rattus_norvegicus
ENSLOCG00000005597	pop4	79	62.644	ENSRBIG00000044769	POP4	86	68.841	Rhinopithecus_bieti
ENSLOCG00000005597	pop4	100	69.091	ENSRROG00000028903	POP4	100	69.091	Rhinopithecus_roxellana
ENSLOCG00000005597	pop4	61	32.432	YBR257W	-	52	32.432	Saccharomyces_cerevisiae
ENSLOCG00000005597	pop4	100	69.091	ENSSBOG00000032445	POP4	100	69.091	Saimiri_boliviensis_boliviensis
ENSLOCG00000005597	pop4	99	69.124	ENSSHAG00000016888	POP4	98	69.444	Sarcophilus_harrisii
ENSLOCG00000005597	pop4	99	71.233	ENSSFOG00015014556	pop4	98	71.233	Scleropages_formosus
ENSLOCG00000005597	pop4	99	64.706	ENSSMAG00000016611	pop4	99	64.706	Scophthalmus_maximus
ENSLOCG00000005597	pop4	99	63.801	ENSSDUG00000019865	pop4	89	63.348	Seriola_dumerili
ENSLOCG00000005597	pop4	99	64.253	ENSSLDG00000001763	pop4	99	63.801	Seriola_lalandi_dorsalis
ENSLOCG00000005597	pop4	99	68.664	ENSSARG00000004748	POP4	99	68.981	Sorex_araneus
ENSLOCG00000005597	pop4	99	64.253	ENSSPAG00000014364	pop4	99	63.801	Stegastes_partitus
ENSLOCG00000005597	pop4	100	70.000	ENSSSCG00000002854	POP4	100	70.000	Sus_scrofa
ENSLOCG00000005597	pop4	90	70.854	ENSTGUG00000008953	POP4	99	70.854	Taeniopygia_guttata
ENSLOCG00000005597	pop4	92	66.010	ENSTNIG00000006401	pop4	100	66.010	Tetraodon_nigroviridis
ENSLOCG00000005597	pop4	100	67.873	ENSTBEG00000002194	POP4	100	67.873	Tupaia_belangeri
ENSLOCG00000005597	pop4	100	70.000	ENSTTRG00000005882	POP4	100	70.000	Tursiops_truncatus
ENSLOCG00000005597	pop4	100	67.727	ENSUAMG00000003049	-	100	67.727	Ursus_americanus
ENSLOCG00000005597	pop4	100	67.727	ENSUMAG00000007522	-	100	67.727	Ursus_maritimus
ENSLOCG00000005597	pop4	92	71.287	ENSVVUG00000016876	-	71	71.287	Vulpes_vulpes
ENSLOCG00000005597	pop4	99	66.359	ENSXETG00000017598	pop4	99	66.359	Xenopus_tropicalis
ENSLOCG00000005597	pop4	99	59.009	ENSXCOG00000017695	pop4	93	59.009	Xiphophorus_couchianus
ENSLOCG00000005597	pop4	99	59.009	ENSXMAG00000013862	pop4	93	59.009	Xiphophorus_maculatus