EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005682 (Gene tree)
Gene ID: 102690955
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Minus strand
Length: 5979 bases
Position: chrLG13:10749511-10755489
Accession: 102690955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006860	PseudoU_synth_2	PF00849.22	7.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006868	-	906	XM_006637266	ENSLOCP00000006860	217 (aa)	XP_006637329	W5MEQ1

Gene Model

Click here to download ENSLOCG00000005682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005682	rpusd1	99	71.429	ENSG00000007376	RPUSD1	100	70.238	Homo_sapiens
ENSLOCG00000005682	rpusd1	99	80.093	ENSAPOG00000022221	rpusd1	70	80.093	Acanthochromis_polyacanthus
ENSLOCG00000005682	rpusd1	99	74.074	ENSAMEG00000007461	RPUSD1	72	74.074	Ailuropoda_melanoleuca
ENSLOCG00000005682	rpusd1	99	79.167	ENSACIG00000015863	rpusd1	71	79.167	Amphilophus_citrinellus
ENSLOCG00000005682	rpusd1	99	80.374	ENSAOCG00000021975	rpusd1	67	80.374	Amphiprion_ocellaris
ENSLOCG00000005682	rpusd1	99	80.841	ENSAPEG00000001316	rpusd1	67	80.841	Amphiprion_percula
ENSLOCG00000005682	rpusd1	99	79.907	ENSATEG00000002984	rpusd1	69	79.907	Anabas_testudineus
ENSLOCG00000005682	rpusd1	68	75.333	ENSAPLG00000012316	RPUSD1	62	75.333	Anas_platyrhynchos
ENSLOCG00000005682	rpusd1	99	80.374	ENSACAG00000008953	RPUSD1	71	80.374	Anolis_carolinensis
ENSLOCG00000005682	rpusd1	99	73.272	ENSANAG00000024709	RPUSD1	69	73.272	Aotus_nancymaae
ENSLOCG00000005682	rpusd1	99	79.630	ENSACLG00000013692	rpusd1	69	79.630	Astatotilapia_calliptera
ENSLOCG00000005682	rpusd1	99	76.744	ENSAMXG00000019802	rpusd1	73	76.744	Astyanax_mexicanus
ENSLOCG00000005682	rpusd1	99	75.000	ENSBTAG00000000179	RPUSD1	70	75.000	Bos_taurus
ENSLOCG00000005682	rpusd1	99	72.811	ENSCJAG00000012253	RPUSD1	69	72.811	Callithrix_jacchus
ENSLOCG00000005682	rpusd1	99	74.074	ENSCAFG00000019614	RPUSD1	72	74.074	Canis_familiaris
ENSLOCG00000005682	rpusd1	99	74.074	ENSCAFG00020008891	RPUSD1	72	74.074	Canis_lupus_dingo
ENSLOCG00000005682	rpusd1	99	75.463	ENSCHIG00000012872	RPUSD1	70	75.463	Capra_hircus
ENSLOCG00000005682	rpusd1	99	72.222	ENSTSYG00000036934	RPUSD1	92	70.000	Carlito_syrichta
ENSLOCG00000005682	rpusd1	99	73.611	ENSCAPG00000014219	RPUSD1	71	73.611	Cavia_aperea
ENSLOCG00000005682	rpusd1	99	73.611	ENSCPOG00000034604	RPUSD1	71	73.611	Cavia_porcellus
ENSLOCG00000005682	rpusd1	99	72.685	ENSCCAG00000034385	RPUSD1	69	72.685	Cebus_capucinus
ENSLOCG00000005682	rpusd1	99	71.759	ENSCATG00000042983	RPUSD1	79	79.612	Cercocebus_atys
ENSLOCG00000005682	rpusd1	99	73.148	ENSCLAG00000013966	RPUSD1	71	73.148	Chinchilla_lanigera
ENSLOCG00000005682	rpusd1	99	71.759	ENSCSAG00000012121	RPUSD1	69	71.759	Chlorocebus_sabaeus
ENSLOCG00000005682	rpusd1	99	80.374	ENSCPBG00000021101	RPUSD1	71	80.374	Chrysemys_picta_bellii
ENSLOCG00000005682	rpusd1	99	71.759	ENSCANG00000028576	RPUSD1	79	79.612	Colobus_angolensis_palliatus
ENSLOCG00000005682	rpusd1	99	73.611	ENSCGRG00001014253	Rpusd1	71	73.611	Cricetulus_griseus_chok1gshd
ENSLOCG00000005682	rpusd1	99	73.611	ENSCGRG00000017995	Rpusd1	71	73.611	Cricetulus_griseus_crigri
ENSLOCG00000005682	rpusd1	99	81.395	ENSCSEG00000018512	rpusd1	73	81.395	Cynoglossus_semilaevis
ENSLOCG00000005682	rpusd1	99	80.841	ENSCVAG00000022746	rpusd1	70	80.841	Cyprinodon_variegatus
ENSLOCG00000005682	rpusd1	99	85.116	ENSDARG00000060192	rpusd1	73	85.116	Danio_rerio
ENSLOCG00000005682	rpusd1	99	72.222	ENSDNOG00000003721	RPUSD1	70	72.222	Dasypus_novemcinctus
ENSLOCG00000005682	rpusd1	99	73.611	ENSDORG00000026656	Rpusd1	71	73.611	Dipodomys_ordii
ENSLOCG00000005682	rpusd1	96	56.250	ENSEBUG00000008767	rpusd1	68	56.250	Eptatretus_burgeri
ENSLOCG00000005682	rpusd1	99	74.194	ENSEASG00005018421	RPUSD1	52	74.194	Equus_asinus_asinus
ENSLOCG00000005682	rpusd1	95	80.097	ENSELUG00000014307	rpusd1	63	80.093	Esox_lucius
ENSLOCG00000005682	rpusd1	99	73.272	ENSFCAG00000010359	RPUSD1	78	76.699	Felis_catus
ENSLOCG00000005682	rpusd1	99	80.841	ENSFALG00000003211	RPUSD1	71	80.841	Ficedula_albicollis
ENSLOCG00000005682	rpusd1	99	72.685	ENSFDAG00000013398	RPUSD1	71	72.685	Fukomys_damarensis
ENSLOCG00000005682	rpusd1	99	82.243	ENSFHEG00000004736	rpusd1	70	82.243	Fundulus_heteroclitus
ENSLOCG00000005682	rpusd1	100	77.419	ENSGMOG00000010756	rpusd1	71	77.419	Gadus_morhua
ENSLOCG00000005682	rpusd1	99	80.374	ENSGALG00000005315	RPUSD1	71	80.374	Gallus_gallus
ENSLOCG00000005682	rpusd1	99	81.776	ENSGAFG00000009886	rpusd1	70	81.776	Gambusia_affinis
ENSLOCG00000005682	rpusd1	98	82.075	ENSGACG00000014276	rpusd1	69	82.075	Gasterosteus_aculeatus
ENSLOCG00000005682	rpusd1	99	79.439	ENSGAGG00000004181	RPUSD1	71	79.439	Gopherus_agassizii
ENSLOCG00000005682	rpusd1	99	71.429	ENSGGOG00000013997	RPUSD1	92	70.000	Gorilla_gorilla
ENSLOCG00000005682	rpusd1	99	80.093	ENSHBUG00000023728	rpusd1	69	80.093	Haplochromis_burtoni
ENSLOCG00000005682	rpusd1	99	73.148	ENSHGLG00000002595	RPUSD1	71	73.148	Heterocephalus_glaber_female
ENSLOCG00000005682	rpusd1	99	73.148	ENSHGLG00100014303	RPUSD1	71	73.148	Heterocephalus_glaber_male
ENSLOCG00000005682	rpusd1	99	80.000	ENSHCOG00000002390	rpusd1	75	80.000	Hippocampus_comes
ENSLOCG00000005682	rpusd1	99	80.000	ENSIPUG00000001570	rpusd1	71	80.000	Ictalurus_punctatus
ENSLOCG00000005682	rpusd1	99	73.148	ENSSTOG00000004276	RPUSD1	71	73.148	Ictidomys_tridecemlineatus
ENSLOCG00000005682	rpusd1	99	74.074	ENSJJAG00000015696	Rpusd1	71	74.074	Jaculus_jaculus
ENSLOCG00000005682	rpusd1	100	78.802	ENSKMAG00000017287	rpusd1	71	78.802	Kryptolebias_marmoratus
ENSLOCG00000005682	rpusd1	99	81.308	ENSLBEG00000022502	rpusd1	69	81.308	Labrus_bergylta
ENSLOCG00000005682	rpusd1	99	81.308	ENSLBEG00000013354	RPUSD1	69	81.308	Labrus_bergylta
ENSLOCG00000005682	rpusd1	99	78.505	ENSLACG00000008869	RPUSD1	71	78.505	Latimeria_chalumnae
ENSLOCG00000005682	rpusd1	99	72.222	ENSLAFG00000002115	RPUSD1	72	72.222	Loxodonta_africana
ENSLOCG00000005682	rpusd1	99	71.759	ENSMFAG00000003961	RPUSD1	79	79.612	Macaca_fascicularis
ENSLOCG00000005682	rpusd1	99	71.759	ENSMMUG00000000842	RPUSD1	79	79.612	Macaca_mulatta
ENSLOCG00000005682	rpusd1	99	71.759	ENSMNEG00000042712	RPUSD1	79	79.612	Macaca_nemestrina
ENSLOCG00000005682	rpusd1	99	71.759	ENSMLEG00000030591	RPUSD1	79	79.612	Mandrillus_leucophaeus
ENSLOCG00000005682	rpusd1	99	81.776	ENSMAMG00000004735	rpusd1	69	81.776	Mastacembelus_armatus
ENSLOCG00000005682	rpusd1	99	79.630	ENSMZEG00005003214	rpusd1	69	79.630	Maylandia_zebra
ENSLOCG00000005682	rpusd1	95	81.643	ENSMGAG00000005447	RPUSD1	69	81.643	Meleagris_gallopavo
ENSLOCG00000005682	rpusd1	99	64.815	ENSMAUG00000019998	Rpusd1	82	64.815	Mesocricetus_auratus
ENSLOCG00000005682	rpusd1	99	73.148	ENSMICG00000017561	RPUSD1	79	79.612	Microcebus_murinus
ENSLOCG00000005682	rpusd1	99	73.611	ENSMOCG00000014082	Rpusd1	71	73.611	Microtus_ochrogaster
ENSLOCG00000005682	rpusd1	99	79.535	ENSMMOG00000012569	rpusd1	79	79.535	Mola_mola
ENSLOCG00000005682	rpusd1	99	78.505	ENSMODG00000016882	RPUSD1	70	78.505	Monodelphis_domestica
ENSLOCG00000005682	rpusd1	99	82.243	ENSMALG00000017818	rpusd1	69	82.243	Monopterus_albus
ENSLOCG00000005682	rpusd1	99	74.074	MGP_CAROLIEiJ_G0021244	Rpusd1	71	74.074	Mus_caroli
ENSLOCG00000005682	rpusd1	99	74.074	ENSMUSG00000041199	Rpusd1	71	74.074	Mus_musculus
ENSLOCG00000005682	rpusd1	99	73.611	MGP_PahariEiJ_G0023562	Rpusd1	70	73.611	Mus_pahari
ENSLOCG00000005682	rpusd1	99	74.074	MGP_SPRETEiJ_G0022155	Rpusd1	71	74.074	Mus_spretus
ENSLOCG00000005682	rpusd1	99	71.296	ENSMPUG00000015897	RPUSD1	72	71.296	Mustela_putorius_furo
ENSLOCG00000005682	rpusd1	99	74.537	ENSMLUG00000001089	RPUSD1	69	74.537	Myotis_lucifugus
ENSLOCG00000005682	rpusd1	99	75.000	ENSNGAG00000003595	Rpusd1	71	75.000	Nannospalax_galili
ENSLOCG00000005682	rpusd1	99	80.093	ENSNBRG00000006457	rpusd1	72	80.093	Neolamprologus_brichardi
ENSLOCG00000005682	rpusd1	99	78.505	ENSMEUG00000016049	RPUSD1	71	78.505	Notamacropus_eugenii
ENSLOCG00000005682	rpusd1	99	65.741	ENSOPRG00000008340	RPUSD1	72	65.741	Ochotona_princeps
ENSLOCG00000005682	rpusd1	99	73.611	ENSODEG00000016945	RPUSD1	71	73.611	Octodon_degus
ENSLOCG00000005682	rpusd1	99	80.556	ENSONIG00000015672	rpusd1	70	80.556	Oreochromis_niloticus
ENSLOCG00000005682	rpusd1	99	78.505	ENSORLG00000013009	rpusd1	70	78.505	Oryzias_latipes
ENSLOCG00000005682	rpusd1	99	78.037	ENSORLG00020010382	rpusd1	70	78.037	Oryzias_latipes_hni
ENSLOCG00000005682	rpusd1	99	77.570	ENSORLG00015021354	rpusd1	70	77.570	Oryzias_latipes_hsok
ENSLOCG00000005682	rpusd1	99	78.972	ENSOMEG00000021426	rpusd1	71	78.972	Oryzias_melastigma
ENSLOCG00000005682	rpusd1	99	73.611	ENSOGAG00000003795	RPUSD1	69	73.611	Otolemur_garnettii
ENSLOCG00000005682	rpusd1	99	75.463	ENSOARG00000014254	RPUSD1	70	75.463	Ovis_aries
ENSLOCG00000005682	rpusd1	99	70.968	ENSPPAG00000034797	RPUSD1	92	70.000	Pan_paniscus
ENSLOCG00000005682	rpusd1	99	73.272	ENSPPRG00000012389	RPUSD1	91	69.167	Panthera_pardus
ENSLOCG00000005682	rpusd1	99	73.059	ENSPTIG00000008545	RPUSD1	91	69.167	Panthera_tigris_altaica
ENSLOCG00000005682	rpusd1	99	70.968	ENSPTRG00000007565	RPUSD1	92	70.000	Pan_troglodytes
ENSLOCG00000005682	rpusd1	99	71.759	ENSPANG00000024401	RPUSD1	79	79.612	Papio_anubis
ENSLOCG00000005682	rpusd1	100	87.558	ENSPKIG00000018890	rpusd1	65	87.558	Paramormyrops_kingsleyae
ENSLOCG00000005682	rpusd1	99	80.841	ENSPSIG00000013945	RPUSD1	71	80.841	Pelodiscus_sinensis
ENSLOCG00000005682	rpusd1	99	79.167	ENSPMGG00000014950	rpusd1	74	79.167	Periophthalmus_magnuspinnatus
ENSLOCG00000005682	rpusd1	99	73.611	ENSPEMG00000000497	Rpusd1	71	73.611	Peromyscus_maniculatus_bairdii
ENSLOCG00000005682	rpusd1	99	67.593	ENSPMAG00000001563	rpusd1	71	67.593	Petromyzon_marinus
ENSLOCG00000005682	rpusd1	99	79.439	ENSPCIG00000021216	-	66	79.439	Phascolarctos_cinereus
ENSLOCG00000005682	rpusd1	99	82.243	ENSPFOG00000007946	rpusd1	71	82.243	Poecilia_formosa
ENSLOCG00000005682	rpusd1	99	82.243	ENSPLAG00000011925	rpusd1	71	82.243	Poecilia_latipinna
ENSLOCG00000005682	rpusd1	99	82.243	ENSPMEG00000002910	rpusd1	71	82.243	Poecilia_mexicana
ENSLOCG00000005682	rpusd1	99	82.710	ENSPREG00000019851	rpusd1	70	82.710	Poecilia_reticulata
ENSLOCG00000005682	rpusd1	99	55.093	ENSPCAG00000002258	RPUSD1	72	55.093	Procavia_capensis
ENSLOCG00000005682	rpusd1	99	73.148	ENSPCOG00000022582	RPUSD1	79	79.612	Propithecus_coquereli
ENSLOCG00000005682	rpusd1	99	69.585	ENSPVAG00000013104	RPUSD1	69	69.585	Pteropus_vampyrus
ENSLOCG00000005682	rpusd1	99	80.093	ENSPNYG00000024076	rpusd1	79	80.093	Pundamilia_nyererei
ENSLOCG00000005682	rpusd1	99	75.814	ENSPNAG00000013806	rpusd1	73	75.814	Pygocentrus_nattereri
ENSLOCG00000005682	rpusd1	99	74.074	ENSRNOG00000023639	Rpusd1	71	74.074	Rattus_norvegicus
ENSLOCG00000005682	rpusd1	99	71.759	ENSRBIG00000030238	RPUSD1	79	79.612	Rhinopithecus_bieti
ENSLOCG00000005682	rpusd1	99	71.759	ENSRROG00000036663	RPUSD1	79	79.612	Rhinopithecus_roxellana
ENSLOCG00000005682	rpusd1	99	73.272	ENSSBOG00000033063	RPUSD1	72	73.272	Saimiri_boliviensis_boliviensis
ENSLOCG00000005682	rpusd1	99	78.505	ENSSHAG00000013500	RPUSD1	71	78.505	Sarcophilus_harrisii
ENSLOCG00000005682	rpusd1	99	88.372	ENSSFOG00015014394	rpusd1	72	88.372	Scleropages_formosus
ENSLOCG00000005682	rpusd1	99	82.710	ENSSMAG00000008045	rpusd1	64	82.710	Scophthalmus_maximus
ENSLOCG00000005682	rpusd1	99	82.710	ENSSDUG00000001829	rpusd1	67	82.710	Seriola_dumerili
ENSLOCG00000005682	rpusd1	99	82.710	ENSSLDG00000020853	rpusd1	67	82.710	Seriola_lalandi_dorsalis
ENSLOCG00000005682	rpusd1	76	74.251	ENSSARG00000011187	-	100	74.251	Sorex_araneus
ENSLOCG00000005682	rpusd1	99	82.243	ENSSPAG00000012708	rpusd1	69	82.243	Stegastes_partitus
ENSLOCG00000005682	rpusd1	99	74.194	ENSSSCG00000008000	RPUSD1	83	74.194	Sus_scrofa
ENSLOCG00000005682	rpusd1	99	80.374	ENSTGUG00000015375	RPUSD1	85	80.374	Taeniopygia_guttata
ENSLOCG00000005682	rpusd1	99	81.019	ENSTRUG00000003041	rpusd1	69	81.019	Takifugu_rubripes
ENSLOCG00000005682	rpusd1	94	78.922	ENSTNIG00000002660	rpusd1	79	78.972	Tetraodon_nigroviridis
ENSLOCG00000005682	rpusd1	99	74.074	ENSTTRG00000010167	RPUSD1	69	74.074	Tursiops_truncatus
ENSLOCG00000005682	rpusd1	99	73.148	ENSUAMG00000012736	RPUSD1	72	73.148	Ursus_americanus
ENSLOCG00000005682	rpusd1	99	73.148	ENSUMAG00000021174	RPUSD1	78	73.148	Ursus_maritimus
ENSLOCG00000005682	rpusd1	99	74.074	ENSVVUG00000012357	RPUSD1	72	74.074	Vulpes_vulpes
ENSLOCG00000005682	rpusd1	99	77.103	ENSXETG00000007184	rpusd1	71	77.103	Xenopus_tropicalis
ENSLOCG00000005682	rpusd1	99	81.776	ENSXCOG00000017930	rpusd1	74	81.818	Xiphophorus_couchianus
ENSLOCG00000005682	rpusd1	99	81.776	ENSXMAG00000024084	rpusd1	70	81.776	Xiphophorus_maculatus