EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005683 (Gene tree)
Gene ID: 102684548
Gene Symbol: ccdc12
Alias: zgc:101038
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 14877 bases
Position: chrLG11:16406579-16421455
Accession: 102684548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006864	cwf18	PF08315.12	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006872	-	2401	XM_006635709	ENSLOCP00000006864	177 (aa)	XP_006635772	W5MEQ5

Gene Model

Click here to download ENSLOCG00000005683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005683	ccdc12	95	71.264	ENSG00000160799	CCDC12	96	74.375	Homo_sapiens
ENSLOCG00000005683	ccdc12	92	82.822	ENSAPOG00000014426	ccdc12	60	82.822	Acanthochromis_polyacanthus
ENSLOCG00000005683	ccdc12	91	73.620	ENSAMEG00000012658	CCDC12	98	73.620	Ailuropoda_melanoleuca
ENSLOCG00000005683	ccdc12	68	85.124	ENSACIG00000022676	-	81	86.726	Amphilophus_citrinellus
ENSLOCG00000005683	ccdc12	63	86.607	ENSACIG00000015192	ccdc12	80	86.607	Amphilophus_citrinellus
ENSLOCG00000005683	ccdc12	93	82.424	ENSAOCG00000024127	ccdc12	99	82.424	Amphiprion_ocellaris
ENSLOCG00000005683	ccdc12	92	83.436	ENSAPEG00000009155	ccdc12	86	83.436	Amphiprion_percula
ENSLOCG00000005683	ccdc12	75	85.821	ENSATEG00000004807	ccdc12	100	85.821	Anabas_testudineus
ENSLOCG00000005683	ccdc12	72	75.385	ENSAPLG00000005482	CCDC12	95	75.385	Anas_platyrhynchos
ENSLOCG00000005683	ccdc12	92	70.238	ENSACAG00000004727	CCDC12	86	70.238	Anolis_carolinensis
ENSLOCG00000005683	ccdc12	73	77.273	ENSANAG00000024483	CCDC12	99	78.030	Aotus_nancymaae
ENSLOCG00000005683	ccdc12	87	70.323	ENSACLG00000012742	-	96	70.323	Astatotilapia_calliptera
ENSLOCG00000005683	ccdc12	92	80.368	ENSACLG00000005356	ccdc12	100	80.368	Astatotilapia_calliptera
ENSLOCG00000005683	ccdc12	92	81.595	ENSAMXG00000016319	ccdc12	100	80.982	Astyanax_mexicanus
ENSLOCG00000005683	ccdc12	83	76.351	ENSBTAG00000011311	CCDC12	92	74.839	Bos_taurus
ENSLOCG00000005683	ccdc12	76	39.855	WBGene00022092	Y69A2AR.21	84	39.216	Caenorhabditis_elegans
ENSLOCG00000005683	ccdc12	89	73.750	ENSCJAG00000002280	CCDC12	96	74.375	Callithrix_jacchus
ENSLOCG00000005683	ccdc12	92	73.171	ENSCAFG00000013588	CCDC12	98	73.171	Canis_familiaris
ENSLOCG00000005683	ccdc12	95	71.765	ENSCAFG00020014024	CCDC12	94	71.765	Canis_lupus_dingo
ENSLOCG00000005683	ccdc12	83	76.351	ENSCHIG00000014512	CCDC12	92	74.839	Capra_hircus
ENSLOCG00000005683	ccdc12	91	73.006	ENSTSYG00000032837	CCDC12	98	73.171	Carlito_syrichta
ENSLOCG00000005683	ccdc12	89	74.375	ENSCPOG00000032515	CCDC12	96	75.000	Cavia_porcellus
ENSLOCG00000005683	ccdc12	95	71.264	ENSCCAG00000020126	CCDC12	97	71.839	Cebus_capucinus
ENSLOCG00000005683	ccdc12	95	60.116	ENSCATG00000033681	CCDC12	96	58.989	Cercocebus_atys
ENSLOCG00000005683	ccdc12	89	74.375	ENSCLAG00000016013	CCDC12	96	75.000	Chinchilla_lanigera
ENSLOCG00000005683	ccdc12	95	70.690	ENSCSAG00000016154	CCDC12	97	71.264	Chlorocebus_sabaeus
ENSLOCG00000005683	ccdc12	97	64.246	ENSCPBG00000015804	CCDC12	86	64.246	Chrysemys_picta_bellii
ENSLOCG00000005683	ccdc12	89	51.534	ENSCING00000005261	-	96	51.534	Ciona_intestinalis
ENSLOCG00000005683	ccdc12	89	73.125	ENSCANG00000020857	CCDC12	97	71.264	Colobus_angolensis_palliatus
ENSLOCG00000005683	ccdc12	91	73.006	ENSCGRG00001000459	Ccdc12	98	73.006	Cricetulus_griseus_chok1gshd
ENSLOCG00000005683	ccdc12	91	73.006	ENSCGRG00000012816	Ccdc12	98	73.006	Cricetulus_griseus_crigri
ENSLOCG00000005683	ccdc12	92	80.982	ENSCSEG00000004543	ccdc12	100	80.982	Cynoglossus_semilaevis
ENSLOCG00000005683	ccdc12	75	85.821	ENSCVAG00000011342	ccdc12	100	85.821	Cyprinodon_variegatus
ENSLOCG00000005683	ccdc12	92	81.595	ENSDARG00000023003	ccdc12	100	81.595	Danio_rerio
ENSLOCG00000005683	ccdc12	84	68.000	ENSDORG00000024399	-	89	68.667	Dipodomys_ordii
ENSLOCG00000005683	ccdc12	81	74.483	ENSDORG00000016567	-	90	77.333	Dipodomys_ordii
ENSLOCG00000005683	ccdc12	89	42.405	FBgn0039732	CG15525	91	42.405	Drosophila_melanogaster
ENSLOCG00000005683	ccdc12	60	69.159	ENSETEG00000000030	CCDC12	94	70.093	Echinops_telfairi
ENSLOCG00000005683	ccdc12	92	59.259	ENSEBUG00000005674	ccdc12	100	61.350	Eptatretus_burgeri
ENSLOCG00000005683	ccdc12	93	72.941	ENSEASG00005008148	-	70	72.941	Equus_asinus_asinus
ENSLOCG00000005683	ccdc12	89	69.375	ENSECAG00000008649	CCDC12	96	69.375	Equus_caballus
ENSLOCG00000005683	ccdc12	92	81.212	ENSELUG00000024105	ccdc12	100	81.818	Esox_lucius
ENSLOCG00000005683	ccdc12	92	73.780	ENSFCAG00000015474	CCDC12	98	73.780	Felis_catus
ENSLOCG00000005683	ccdc12	88	66.038	ENSFALG00000001895	CCDC12	98	66.038	Ficedula_albicollis
ENSLOCG00000005683	ccdc12	91	74.233	ENSFDAG00000002549	CCDC12	98	74.847	Fukomys_damarensis
ENSLOCG00000005683	ccdc12	92	83.436	ENSFHEG00000016247	ccdc12	93	83.436	Fundulus_heteroclitus
ENSLOCG00000005683	ccdc12	92	70.552	ENSGMOG00000016901	ccdc12	100	70.552	Gadus_morhua
ENSLOCG00000005683	ccdc12	92	82.822	ENSGAFG00000006762	ccdc12	100	82.822	Gambusia_affinis
ENSLOCG00000005683	ccdc12	92	79.755	ENSGACG00000008629	ccdc12	100	79.755	Gasterosteus_aculeatus
ENSLOCG00000005683	ccdc12	89	70.000	ENSGAGG00000019688	CCDC12	95	69.375	Gopherus_agassizii
ENSLOCG00000005683	ccdc12	95	71.264	ENSGGOG00000009012	CCDC12	97	71.839	Gorilla_gorilla
ENSLOCG00000005683	ccdc12	92	80.982	ENSHBUG00000016447	ccdc12	100	80.982	Haplochromis_burtoni
ENSLOCG00000005683	ccdc12	91	74.233	ENSHGLG00000014058	CCDC12	98	74.847	Heterocephalus_glaber_female
ENSLOCG00000005683	ccdc12	91	74.233	ENSHGLG00100005918	CCDC12	98	74.847	Heterocephalus_glaber_male
ENSLOCG00000005683	ccdc12	92	75.000	ENSHCOG00000015164	ccdc12	100	74.390	Hippocampus_comes
ENSLOCG00000005683	ccdc12	89	77.358	ENSIPUG00000001310	Ccdc12	97	76.730	Ictalurus_punctatus
ENSLOCG00000005683	ccdc12	91	74.847	ENSSTOG00000003085	CCDC12	98	75.460	Ictidomys_tridecemlineatus
ENSLOCG00000005683	ccdc12	91	71.779	ENSJJAG00000014918	Ccdc12	98	72.393	Jaculus_jaculus
ENSLOCG00000005683	ccdc12	92	75.758	ENSKMAG00000013891	ccdc12	100	75.152	Kryptolebias_marmoratus
ENSLOCG00000005683	ccdc12	89	81.761	ENSLBEG00000024714	ccdc12	84	81.761	Labrus_bergylta
ENSLOCG00000005683	ccdc12	92	70.122	ENSLAFG00000027745	-	100	70.732	Loxodonta_africana
ENSLOCG00000005683	ccdc12	63	81.250	ENSLAFG00000022573	-	98	81.250	Loxodonta_africana
ENSLOCG00000005683	ccdc12	95	70.690	ENSMFAG00000002976	CCDC12	97	71.264	Macaca_fascicularis
ENSLOCG00000005683	ccdc12	95	70.690	ENSMMUG00000019810	CCDC12	97	71.264	Macaca_mulatta
ENSLOCG00000005683	ccdc12	95	70.690	ENSMNEG00000035785	CCDC12	97	71.264	Macaca_nemestrina
ENSLOCG00000005683	ccdc12	95	70.690	ENSMLEG00000038060	CCDC12	97	71.264	Mandrillus_leucophaeus
ENSLOCG00000005683	ccdc12	92	82.209	ENSMAMG00000012165	ccdc12	100	82.209	Mastacembelus_armatus
ENSLOCG00000005683	ccdc12	92	80.982	ENSMZEG00005014728	ccdc12	100	80.982	Maylandia_zebra
ENSLOCG00000005683	ccdc12	87	70.968	ENSMZEG00005019013	-	96	70.968	Maylandia_zebra
ENSLOCG00000005683	ccdc12	77	71.014	ENSMGAG00000002815	CCDC12	91	67.702	Meleagris_gallopavo
ENSLOCG00000005683	ccdc12	91	72.393	ENSMAUG00000008879	Ccdc12	98	72.393	Mesocricetus_auratus
ENSLOCG00000005683	ccdc12	92	72.619	ENSMICG00000032886	CCDC12	100	72.619	Microcebus_murinus
ENSLOCG00000005683	ccdc12	92	71.951	ENSMOCG00000004483	Ccdc12	98	71.951	Microtus_ochrogaster
ENSLOCG00000005683	ccdc12	63	84.685	ENSMMOG00000001860	ccdc12	77	84.685	Mola_mola
ENSLOCG00000005683	ccdc12	92	63.473	ENSMODG00000025021	-	100	63.473	Monodelphis_domestica
ENSLOCG00000005683	ccdc12	89	71.605	ENSMODG00000013967	-	96	72.050	Monodelphis_domestica
ENSLOCG00000005683	ccdc12	92	61.677	ENSMODG00000022615	-	100	61.677	Monodelphis_domestica
ENSLOCG00000005683	ccdc12	92	81.595	ENSMALG00000011850	ccdc12	100	81.595	Monopterus_albus
ENSLOCG00000005683	ccdc12	89	73.750	MGP_CAROLIEiJ_G0032737	-	96	73.750	Mus_caroli
ENSLOCG00000005683	ccdc12	89	73.750	ENSMUSG00000019659	Ccdc12	96	73.750	Mus_musculus
ENSLOCG00000005683	ccdc12	89	73.750	MGP_PahariEiJ_G0015604	Ccdc12	96	73.750	Mus_pahari
ENSLOCG00000005683	ccdc12	89	73.750	MGP_SPRETEiJ_G0033885	Ccdc12	96	73.750	Mus_spretus
ENSLOCG00000005683	ccdc12	92	68.902	ENSMLUG00000009547	CCDC12	98	68.293	Myotis_lucifugus
ENSLOCG00000005683	ccdc12	89	70.625	ENSNGAG00000004149	Ccdc12	96	73.750	Nannospalax_galili
ENSLOCG00000005683	ccdc12	92	72.222	ENSNBRG00000015275	ccdc12	100	71.257	Neolamprologus_brichardi
ENSLOCG00000005683	ccdc12	92	72.121	ENSNLEG00000006219	CCDC12	99	72.727	Nomascus_leucogenys
ENSLOCG00000005683	ccdc12	88	69.677	ENSOPRG00000005086	CCDC12	94	69.677	Ochotona_princeps
ENSLOCG00000005683	ccdc12	92	73.171	ENSODEG00000012202	CCDC12	98	73.780	Octodon_degus
ENSLOCG00000005683	ccdc12	92	80.982	ENSONIG00000003061	ccdc12	100	80.982	Oreochromis_niloticus
ENSLOCG00000005683	ccdc12	73	74.242	ENSOANG00000004263	-	92	71.429	Ornithorhynchus_anatinus
ENSLOCG00000005683	ccdc12	99	63.918	ENSOCUG00000012431	CCDC12	98	64.433	Oryctolagus_cuniculus
ENSLOCG00000005683	ccdc12	92	78.182	ENSORLG00000008126	ccdc12	100	78.182	Oryzias_latipes
ENSLOCG00000005683	ccdc12	92	80.368	ENSORLG00020013927	ccdc12	100	80.368	Oryzias_latipes_hni
ENSLOCG00000005683	ccdc12	92	80.368	ENSORLG00015020115	ccdc12	100	80.368	Oryzias_latipes_hsok
ENSLOCG00000005683	ccdc12	92	80.368	ENSOMEG00000022304	ccdc12	100	80.368	Oryzias_melastigma
ENSLOCG00000005683	ccdc12	92	80.368	ENSOMEG00000014082	ccdc12	100	80.368	Oryzias_melastigma
ENSLOCG00000005683	ccdc12	63	80.357	ENSOGAG00000016807	CCDC12	100	80.357	Otolemur_garnettii
ENSLOCG00000005683	ccdc12	65	82.759	ENSOARG00000006426	CCDC12	98	76.866	Ovis_aries
ENSLOCG00000005683	ccdc12	95	71.264	ENSPPAG00000028782	CCDC12	97	71.264	Pan_paniscus
ENSLOCG00000005683	ccdc12	92	73.780	ENSPPRG00000013547	CCDC12	98	73.780	Panthera_pardus
ENSLOCG00000005683	ccdc12	94	72.619	ENSPTIG00000014875	CCDC12	96	72.619	Panthera_tigris_altaica
ENSLOCG00000005683	ccdc12	95	71.264	ENSPTRG00000014862	CCDC12	97	71.839	Pan_troglodytes
ENSLOCG00000005683	ccdc12	94	71.345	ENSPANG00000017485	CCDC12	97	71.930	Papio_anubis
ENSLOCG00000005683	ccdc12	92	80.488	ENSPKIG00000019130	ccdc12	100	82.927	Paramormyrops_kingsleyae
ENSLOCG00000005683	ccdc12	63	81.081	ENSPSIG00000010867	CCDC12	100	81.081	Pelodiscus_sinensis
ENSLOCG00000005683	ccdc12	92	83.436	ENSPMGG00000012211	ccdc12	100	83.436	Periophthalmus_magnuspinnatus
ENSLOCG00000005683	ccdc12	91	73.006	ENSPEMG00000022196	-	98	73.006	Peromyscus_maniculatus_bairdii
ENSLOCG00000005683	ccdc12	89	60.248	ENSPEMG00000001376	-	95	60.248	Peromyscus_maniculatus_bairdii
ENSLOCG00000005683	ccdc12	88	70.513	ENSPMAG00000000005	ccdc12	92	69.872	Petromyzon_marinus
ENSLOCG00000005683	ccdc12	89	73.125	ENSPCIG00000025941	CCDC12	96	73.292	Phascolarctos_cinereus
ENSLOCG00000005683	ccdc12	92	82.822	ENSPFOG00000000343	ccdc12	100	82.822	Poecilia_formosa
ENSLOCG00000005683	ccdc12	92	82.822	ENSPLAG00000019010	ccdc12	100	82.822	Poecilia_latipinna
ENSLOCG00000005683	ccdc12	99	76.503	ENSPMEG00000022371	ccdc12	83	81.548	Poecilia_mexicana
ENSLOCG00000005683	ccdc12	93	82.143	ENSPREG00000020932	ccdc12	83	82.143	Poecilia_reticulata
ENSLOCG00000005683	ccdc12	95	71.264	ENSPPYG00000013924	CCDC12	86	71.839	Pongo_abelii
ENSLOCG00000005683	ccdc12	92	73.939	ENSPCAG00000005800	CCDC12	98	73.939	Procavia_capensis
ENSLOCG00000005683	ccdc12	95	71.429	ENSPCOG00000018682	CCDC12	97	71.429	Propithecus_coquereli
ENSLOCG00000005683	ccdc12	91	73.780	ENSPVAG00000004204	CCDC12	98	73.620	Pteropus_vampyrus
ENSLOCG00000005683	ccdc12	92	80.982	ENSPNYG00000016295	ccdc12	100	80.982	Pundamilia_nyererei
ENSLOCG00000005683	ccdc12	92	67.485	ENSPNAG00000028558	ccdc12	90	90.090	Pygocentrus_nattereri
ENSLOCG00000005683	ccdc12	89	73.750	ENSRNOG00000020946	Ccdc12	96	73.750	Rattus_norvegicus
ENSLOCG00000005683	ccdc12	95	70.690	ENSRBIG00000039910	CCDC12	97	71.264	Rhinopithecus_bieti
ENSLOCG00000005683	ccdc12	89	73.125	ENSRROG00000039721	CCDC12	96	73.750	Rhinopithecus_roxellana
ENSLOCG00000005683	ccdc12	95	71.264	ENSSBOG00000035443	CCDC12	97	71.839	Saimiri_boliviensis_boliviensis
ENSLOCG00000005683	ccdc12	82	76.027	ENSSHAG00000003265	-	91	76.027	Sarcophilus_harrisii
ENSLOCG00000005683	ccdc12	92	82.317	ENSSFOG00015001307	ccdc12	100	81.707	Scleropages_formosus
ENSLOCG00000005683	ccdc12	83	83.784	ENSSMAG00000019856	ccdc12	100	81.707	Scophthalmus_maximus
ENSLOCG00000005683	ccdc12	92	79.755	ENSSDUG00000006549	ccdc12	100	79.755	Seriola_dumerili
ENSLOCG00000005683	ccdc12	92	82.209	ENSSLDG00000015956	ccdc12	100	82.209	Seriola_lalandi_dorsalis
ENSLOCG00000005683	ccdc12	82	50.000	ENSSPUG00000013054	CCDC12	91	50.000	Sphenodon_punctatus
ENSLOCG00000005683	ccdc12	92	82.822	ENSSPAG00000007010	ccdc12	100	82.822	Stegastes_partitus
ENSLOCG00000005683	ccdc12	87	45.455	ENSSSCG00000007882	-	97	45.455	Sus_scrofa
ENSLOCG00000005683	ccdc12	92	72.393	ENSSSCG00000011329	-	98	72.393	Sus_scrofa
ENSLOCG00000005683	ccdc12	61	70.000	ENSTGUG00000000186	CCDC12	86	70.000	Taeniopygia_guttata
ENSLOCG00000005683	ccdc12	95	69.822	ENSTRUG00000014023	ccdc12	88	68.639	Takifugu_rubripes
ENSLOCG00000005683	ccdc12	92	75.460	ENSTNIG00000018407	ccdc12	98	75.460	Tetraodon_nigroviridis
ENSLOCG00000005683	ccdc12	91	48.780	ENSTBEG00000000048	CCDC12	98	48.780	Tupaia_belangeri
ENSLOCG00000005683	ccdc12	92	67.665	ENSTTRG00000015854	CCDC12	98	68.263	Tursiops_truncatus
ENSLOCG00000005683	ccdc12	95	65.882	ENSUAMG00000025548	CCDC12	95	75.362	Ursus_americanus
ENSLOCG00000005683	ccdc12	92	73.171	ENSUMAG00000004346	CCDC12	98	73.171	Ursus_maritimus
ENSLOCG00000005683	ccdc12	60	59.434	ENSVPAG00000000070	-	94	59.434	Vicugna_pacos
ENSLOCG00000005683	ccdc12	92	73.171	ENSVVUG00000004582	CCDC12	98	73.171	Vulpes_vulpes
ENSLOCG00000005683	ccdc12	73	77.692	ENSXETG00000013123	ccdc12	97	76.923	Xenopus_tropicalis
ENSLOCG00000005683	ccdc12	92	82.822	ENSXCOG00000019741	ccdc12	100	82.822	Xiphophorus_couchianus
ENSLOCG00000005683	ccdc12	93	81.548	ENSXMAG00000014098	ccdc12	83	81.548	Xiphophorus_maculatus