EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005711 (Gene tree)
Gene ID: 102693204
Gene Symbol: tarbp2
Alias: fj51e12|wu:fj51e12|zgc:63778
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 12942 bases
Position: chrLG4:14545496-14558437
Accession: 102693204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006913	dsrm	PF00035.26	4.1e-37	1	2
ENSLOCP00000006913	dsrm	PF00035.26	4.1e-37	2	2
ENSLOCP00000006894	dsrm	PF00035.26	8.9e-33	1	2
ENSLOCP00000006894	dsrm	PF00035.26	8.9e-33	2	2
ENSLOCP00000006913	DND1_DSRM	PF14709.7	6.7e-13	1	1
ENSLOCP00000006894	DND1_DSRM	PF14709.7	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006921	-	1586	XM_006629255	ENSLOCP00000006913	345 (aa)	-	W5MEV4
ENSLOCT00000006902	-	1490	-	ENSLOCP00000006894	313 (aa)	XP_015199686	W5MET5

Gene Model

Click here to download ENSLOCG00000005711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005711	tarbp2	99	47.230	ENSLOCG00000006829	prkra	99	47.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005711	tarbp2	100	67.486	ENSG00000139546	TARBP2	92	92.593	Homo_sapiens
ENSLOCG00000005711	tarbp2	100	81.503	ENSAPOG00000019892	tarbp2	100	81.714	Acanthochromis_polyacanthus
ENSLOCG00000005711	tarbp2	100	68.306	ENSAMEG00000012601	TARBP2	100	68.306	Ailuropoda_melanoleuca
ENSLOCG00000005711	tarbp2	100	79.714	ENSACIG00000016780	tarbp2	100	80.925	Amphilophus_citrinellus
ENSLOCG00000005711	tarbp2	100	81.503	ENSAOCG00000005201	tarbp2	100	81.714	Amphiprion_ocellaris
ENSLOCG00000005711	tarbp2	100	81.503	ENSAPEG00000008376	tarbp2	100	81.714	Amphiprion_percula
ENSLOCG00000005711	tarbp2	100	80.347	ENSATEG00000025012	tarbp2	100	80.286	Anabas_testudineus
ENSLOCG00000005711	tarbp2	100	71.745	ENSACAG00000001100	TARBP2	100	71.745	Anolis_carolinensis
ENSLOCG00000005711	tarbp2	100	67.120	ENSANAG00000034453	TARBP2	94	81.081	Aotus_nancymaae
ENSLOCG00000005711	tarbp2	95	80.480	ENSACLG00000018569	tarbp2	95	80.665	Astatotilapia_calliptera
ENSLOCG00000005711	tarbp2	100	83.285	ENSAMXG00000016665	tarbp2	100	83.573	Astyanax_mexicanus
ENSLOCG00000005711	tarbp2	100	68.306	ENSBTAG00000000435	TARBP2	100	68.579	Bos_taurus
ENSLOCG00000005711	tarbp2	100	67.120	ENSCJAG00000018668	TARBP2	100	67.213	Callithrix_jacchus
ENSLOCG00000005711	tarbp2	100	71.264	ENSCAFG00000006874	TARBP2	100	71.264	Canis_familiaris
ENSLOCG00000005711	tarbp2	100	68.033	ENSCAFG00020020735	TARBP2	100	69.565	Canis_lupus_dingo
ENSLOCG00000005711	tarbp2	100	68.108	ENSCHIG00000026017	TARBP2	100	68.108	Capra_hircus
ENSLOCG00000005711	tarbp2	100	68.579	ENSTSYG00000035683	TARBP2	94	81.081	Carlito_syrichta
ENSLOCG00000005711	tarbp2	64	72.000	ENSCAPG00000008981	TARBP2	100	72.000	Cavia_aperea
ENSLOCG00000005711	tarbp2	100	67.760	ENSCPOG00000001009	TARBP2	100	68.306	Cavia_porcellus
ENSLOCG00000005711	tarbp2	100	66.848	ENSCCAG00000033025	TARBP2	91	96.226	Cebus_capucinus
ENSLOCG00000005711	tarbp2	100	67.486	ENSCATG00000026344	TARBP2	94	81.081	Cercocebus_atys
ENSLOCG00000005711	tarbp2	100	67.213	ENSCLAG00000009175	TARBP2	100	67.486	Chinchilla_lanigera
ENSLOCG00000005711	tarbp2	100	67.486	ENSCSAG00000005479	TARBP2	100	67.213	Chlorocebus_sabaeus
ENSLOCG00000005711	tarbp2	100	73.056	ENSCPBG00000000654	TARBP2	100	75.516	Chrysemys_picta_bellii
ENSLOCG00000005711	tarbp2	100	67.486	ENSCANG00000040415	TARBP2	91	94.340	Colobus_angolensis_palliatus
ENSLOCG00000005711	tarbp2	100	67.945	ENSCGRG00001011856	TARBP2	100	67.671	Cricetulus_griseus_chok1gshd
ENSLOCG00000005711	tarbp2	100	67.945	ENSCGRG00000009088	TARBP2	100	68.724	Cricetulus_griseus_crigri
ENSLOCG00000005711	tarbp2	100	80.000	ENSCSEG00000010631	tarbp2	100	80.286	Cynoglossus_semilaevis
ENSLOCG00000005711	tarbp2	100	80.172	ENSCVAG00000009832	tarbp2	100	80.172	Cyprinodon_variegatus
ENSLOCG00000005711	tarbp2	100	79.714	ENSDARG00000070471	tarbp2	100	79.714	Danio_rerio
ENSLOCG00000005711	tarbp2	100	67.760	ENSDNOG00000002144	TARBP2	100	67.760	Dasypus_novemcinctus
ENSLOCG00000005711	tarbp2	66	69.828	ENSDORG00000001390	Tarbp2	88	73.953	Dipodomys_ordii
ENSLOCG00000005711	tarbp2	87	82.353	ENSETEG00000002458	TARBP2	83	82.353	Echinops_telfairi
ENSLOCG00000005711	tarbp2	93	60.372	ENSEBUG00000002377	tarbp2	96	61.300	Eptatretus_burgeri
ENSLOCG00000005711	tarbp2	100	68.306	ENSEASG00005010030	TARBP2	100	67.742	Equus_asinus_asinus
ENSLOCG00000005711	tarbp2	100	71.429	ENSECAG00000011695	TARBP2	94	81.081	Equus_caballus
ENSLOCG00000005711	tarbp2	88	65.385	ENSEEUG00000001128	-	99	65.385	Erinaceus_europaeus
ENSLOCG00000005711	tarbp2	100	80.403	ENSELUG00000010642	tarbp2	100	80.682	Esox_lucius
ENSLOCG00000005711	tarbp2	100	68.306	ENSFCAG00000007757	TARBP2	100	68.306	Felis_catus
ENSLOCG00000005711	tarbp2	100	68.306	ENSFDAG00000011932	TARBP2	100	70.492	Fukomys_damarensis
ENSLOCG00000005711	tarbp2	94	80.851	ENSFHEG00000016118	tarbp2	100	80.547	Fundulus_heteroclitus
ENSLOCG00000005711	tarbp2	100	79.261	ENSGMOG00000001290	tarbp2	100	79.261	Gadus_morhua
ENSLOCG00000005711	tarbp2	63	73.394	ENSGALG00000038939	-	83	73.394	Gallus_gallus
ENSLOCG00000005711	tarbp2	100	79.714	ENSGAFG00000013341	tarbp2	100	79.714	Gambusia_affinis
ENSLOCG00000005711	tarbp2	100	77.465	ENSGACG00000006645	tarbp2	100	78.310	Gasterosteus_aculeatus
ENSLOCG00000005711	tarbp2	100	73.611	ENSGAGG00000021169	TARBP2	100	73.611	Gopherus_agassizii
ENSLOCG00000005711	tarbp2	100	67.213	ENSGGOG00000012637	TARBP2	94	79.730	Gorilla_gorilla
ENSLOCG00000005711	tarbp2	100	79.429	ENSHBUG00000018639	tarbp2	100	79.598	Haplochromis_burtoni
ENSLOCG00000005711	tarbp2	100	67.486	ENSHGLG00000001284	TARBP2	100	67.486	Heterocephalus_glaber_female
ENSLOCG00000005711	tarbp2	100	67.486	ENSHGLG00100011274	TARBP2	100	67.486	Heterocephalus_glaber_male
ENSLOCG00000005711	tarbp2	100	76.571	ENSHCOG00000001027	tarbp2	100	76.571	Hippocampus_comes
ENSLOCG00000005711	tarbp2	100	82.184	ENSIPUG00000023701	tarbp2	100	82.184	Ictalurus_punctatus
ENSLOCG00000005711	tarbp2	100	67.760	ENSSTOG00000003678	TARBP2	100	69.672	Ictidomys_tridecemlineatus
ENSLOCG00000005711	tarbp2	100	82.184	ENSKMAG00000012142	tarbp2	100	82.184	Kryptolebias_marmoratus
ENSLOCG00000005711	tarbp2	100	79.661	ENSLBEG00000015027	tarbp2	100	79.944	Labrus_bergylta
ENSLOCG00000005711	tarbp2	95	66.869	ENSLACG00000007087	TARBP2	95	68.085	Latimeria_chalumnae
ENSLOCG00000005711	tarbp2	75	62.868	ENSLAFG00000002620	TARBP2	95	63.603	Loxodonta_africana
ENSLOCG00000005711	tarbp2	100	67.486	ENSMFAG00000013567	TARBP2	94	81.081	Macaca_fascicularis
ENSLOCG00000005711	tarbp2	100	67.760	ENSMMUG00000018492	TARBP2	100	67.486	Macaca_mulatta
ENSLOCG00000005711	tarbp2	100	67.486	ENSMNEG00000036477	TARBP2	94	81.081	Macaca_nemestrina
ENSLOCG00000005711	tarbp2	100	67.816	ENSMLEG00000029583	TARBP2	94	81.081	Mandrillus_leucophaeus
ENSLOCG00000005711	tarbp2	95	82.012	ENSMAMG00000010272	tarbp2	97	78.947	Mastacembelus_armatus
ENSLOCG00000005711	tarbp2	100	79.429	ENSMZEG00005006895	tarbp2	100	79.598	Maylandia_zebra
ENSLOCG00000005711	tarbp2	100	67.397	ENSMAUG00000019805	Tarbp2	100	67.397	Mesocricetus_auratus
ENSLOCG00000005711	tarbp2	94	69.275	ENSMICG00000027441	TARBP2	94	81.081	Microcebus_murinus
ENSLOCG00000005711	tarbp2	100	67.397	ENSMOCG00000003691	Tarbp2	100	67.397	Microtus_ochrogaster
ENSLOCG00000005711	tarbp2	94	81.009	ENSMMOG00000010374	tarbp2	100	81.009	Mola_mola
ENSLOCG00000005711	tarbp2	100	80.347	ENSMALG00000009773	tarbp2	100	80.000	Monopterus_albus
ENSLOCG00000005711	tarbp2	100	67.302	MGP_CAROLIEiJ_G0020356	Tarbp2	91	96.226	Mus_caroli
ENSLOCG00000005711	tarbp2	100	67.302	ENSMUSG00000023051	Tarbp2	91	96.226	Mus_musculus
ENSLOCG00000005711	tarbp2	100	67.671	MGP_PahariEiJ_G0020355	Tarbp2	91	96.226	Mus_pahari
ENSLOCG00000005711	tarbp2	100	67.302	MGP_SPRETEiJ_G0021249	Tarbp2	91	96.226	Mus_spretus
ENSLOCG00000005711	tarbp2	100	67.945	ENSMPUG00000005944	TARBP2	100	67.945	Mustela_putorius_furo
ENSLOCG00000005711	tarbp2	100	69.126	ENSMLUG00000010035	TARBP2	100	68.011	Myotis_lucifugus
ENSLOCG00000005711	tarbp2	100	67.486	ENSNLEG00000017690	TARBP2	94	81.081	Nomascus_leucogenys
ENSLOCG00000005711	tarbp2	100	71.884	ENSMEUG00000001916	TARBP2	100	71.884	Notamacropus_eugenii
ENSLOCG00000005711	tarbp2	64	73.333	ENSOPRG00000011397	TARBP2	100	73.333	Ochotona_princeps
ENSLOCG00000005711	tarbp2	62	69.912	ENSODEG00000013413	TARBP2	100	71.239	Octodon_degus
ENSLOCG00000005711	tarbp2	95	78.963	ENSONIG00000005115	tarbp2	96	78.161	Oreochromis_niloticus
ENSLOCG00000005711	tarbp2	100	69.126	ENSOCUG00000005700	TARBP2	100	69.126	Oryctolagus_cuniculus
ENSLOCG00000005711	tarbp2	100	79.885	ENSORLG00000005209	tarbp2	100	79.656	Oryzias_latipes
ENSLOCG00000005711	tarbp2	100	79.885	ENSORLG00020017755	tarbp2	100	79.656	Oryzias_latipes_hni
ENSLOCG00000005711	tarbp2	100	79.885	ENSORLG00015013237	tarbp2	100	79.656	Oryzias_latipes_hsok
ENSLOCG00000005711	tarbp2	100	79.885	ENSOMEG00000018860	tarbp2	100	79.885	Oryzias_melastigma
ENSLOCG00000005711	tarbp2	100	66.667	ENSOGAG00000001744	TARBP2	100	68.033	Otolemur_garnettii
ENSLOCG00000005711	tarbp2	100	68.579	ENSOARG00000016437	TARBP2	100	68.579	Ovis_aries
ENSLOCG00000005711	tarbp2	100	67.486	ENSPPAG00000030429	TARBP2	94	81.081	Pan_paniscus
ENSLOCG00000005711	tarbp2	100	68.306	ENSPPRG00000000189	TARBP2	100	68.306	Panthera_pardus
ENSLOCG00000005711	tarbp2	100	70.308	ENSPTIG00000007859	TARBP2	100	70.308	Panthera_tigris_altaica
ENSLOCG00000005711	tarbp2	100	67.486	ENSPTRG00000005020	TARBP2	94	81.081	Pan_troglodytes
ENSLOCG00000005711	tarbp2	100	67.486	ENSPANG00000010689	TARBP2	94	81.081	Papio_anubis
ENSLOCG00000005711	tarbp2	100	78.371	ENSPKIG00000002455	tarbp2	100	78.371	Paramormyrops_kingsleyae
ENSLOCG00000005711	tarbp2	100	80.460	ENSPMGG00000006497	tarbp2	100	80.460	Periophthalmus_magnuspinnatus
ENSLOCG00000005711	tarbp2	100	66.396	ENSPEMG00000014285	Tarbp2	100	66.038	Peromyscus_maniculatus_bairdii
ENSLOCG00000005711	tarbp2	92	61.875	ENSPMAG00000000105	tarbp2	99	61.875	Petromyzon_marinus
ENSLOCG00000005711	tarbp2	100	71.884	ENSPCIG00000006672	TARBP2	92	71.884	Phascolarctos_cinereus
ENSLOCG00000005711	tarbp2	100	80.747	ENSPFOG00000007586	tarbp2	100	80.747	Poecilia_formosa
ENSLOCG00000005711	tarbp2	100	80.286	ENSPLAG00000017659	tarbp2	100	80.286	Poecilia_latipinna
ENSLOCG00000005711	tarbp2	100	80.747	ENSPMEG00000007775	tarbp2	100	80.747	Poecilia_mexicana
ENSLOCG00000005711	tarbp2	100	80.460	ENSPREG00000007815	tarbp2	100	80.460	Poecilia_reticulata
ENSLOCG00000005711	tarbp2	100	67.529	ENSPPYG00000004583	TARBP2	100	68.000	Pongo_abelii
ENSLOCG00000005711	tarbp2	78	64.948	ENSPCAG00000005352	TARBP2	80	64.948	Procavia_capensis
ENSLOCG00000005711	tarbp2	100	68.033	ENSPCOG00000013102	TARBP2	94	81.081	Propithecus_coquereli
ENSLOCG00000005711	tarbp2	100	67.204	ENSPVAG00000012286	TARBP2	100	67.204	Pteropus_vampyrus
ENSLOCG00000005711	tarbp2	100	79.429	ENSPNYG00000014125	tarbp2	100	79.598	Pundamilia_nyererei
ENSLOCG00000005711	tarbp2	100	82.709	ENSPNAG00000011128	tarbp2	100	83.862	Pygocentrus_nattereri
ENSLOCG00000005711	tarbp2	100	67.397	ENSRNOG00000042355	Tarbp2	100	67.123	Rattus_norvegicus
ENSLOCG00000005711	tarbp2	100	67.486	ENSRBIG00000027150	TARBP2	94	81.081	Rhinopithecus_bieti
ENSLOCG00000005711	tarbp2	100	67.486	ENSRROG00000044783	TARBP2	94	81.081	Rhinopithecus_roxellana
ENSLOCG00000005711	tarbp2	100	66.848	ENSSBOG00000027305	TARBP2	94	81.081	Saimiri_boliviensis_boliviensis
ENSLOCG00000005711	tarbp2	96	71.470	ENSSHAG00000007064	TARBP2	100	73.457	Sarcophilus_harrisii
ENSLOCG00000005711	tarbp2	100	75.806	ENSSFOG00015010784	tarbp2	100	79.552	Scleropages_formosus
ENSLOCG00000005711	tarbp2	100	78.977	ENSSMAG00000012769	tarbp2	100	78.814	Scophthalmus_maximus
ENSLOCG00000005711	tarbp2	100	81.214	ENSSDUG00000018818	tarbp2	100	81.609	Seriola_dumerili
ENSLOCG00000005711	tarbp2	100	80.925	ENSSLDG00000001835	tarbp2	100	81.322	Seriola_lalandi_dorsalis
ENSLOCG00000005711	tarbp2	76	69.652	ENSSARG00000001010	TARBP2	72	69.652	Sorex_araneus
ENSLOCG00000005711	tarbp2	100	53.409	ENSSPUG00000005895	TARBP2	100	53.977	Sphenodon_punctatus
ENSLOCG00000005711	tarbp2	100	81.143	ENSSPAG00000022797	tarbp2	100	81.143	Stegastes_partitus
ENSLOCG00000005711	tarbp2	100	68.306	ENSSSCG00000000276	TARBP2	100	69.855	Sus_scrofa
ENSLOCG00000005711	tarbp2	73	59.459	ENSTGUG00000017031	TARBP2	100	59.459	Taeniopygia_guttata
ENSLOCG00000005711	tarbp2	100	79.830	ENSTRUG00000014379	tarbp2	100	79.830	Takifugu_rubripes
ENSLOCG00000005711	tarbp2	100	80.747	ENSTNIG00000007065	tarbp2	100	80.286	Tetraodon_nigroviridis
ENSLOCG00000005711	tarbp2	51	73.006	ENSTBEG00000012751	-	52	73.006	Tupaia_belangeri
ENSLOCG00000005711	tarbp2	100	68.579	ENSTTRG00000017177	TARBP2	100	68.579	Tursiops_truncatus
ENSLOCG00000005711	tarbp2	100	68.852	ENSUAMG00000009011	TARBP2	100	68.852	Ursus_americanus
ENSLOCG00000005711	tarbp2	100	68.306	ENSUMAG00000010461	TARBP2	100	68.306	Ursus_maritimus
ENSLOCG00000005711	tarbp2	100	68.033	ENSVVUG00000028150	TARBP2	100	69.565	Vulpes_vulpes
ENSLOCG00000005711	tarbp2	97	73.178	ENSXETG00000012644	tarbp2	97	73.178	Xenopus_tropicalis
ENSLOCG00000005711	tarbp2	100	81.034	ENSXMAG00000017836	tarbp2	100	81.034	Xiphophorus_maculatus