EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005750 (Gene tree)
Gene ID: 102694051
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 10015 bases
Position: chrLG21:14055194-14065208
Accession: 102694051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000006944	zf-C2H2	PF00096.26	1.4e-26	1	5
ENSLOCP00000006944	zf-C2H2	PF00096.26	1.4e-26	2	5
ENSLOCP00000006944	zf-C2H2	PF00096.26	1.4e-26	3	5
ENSLOCP00000006944	zf-C2H2	PF00096.26	1.4e-26	4	5
ENSLOCP00000006944	zf-C2H2	PF00096.26	1.4e-26	5	5
ENSLOCP00000006944	zf-met	PF12874.7	2.2e-08	1	2
ENSLOCP00000006944	zf-met	PF12874.7	2.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000006952	-	4264	XM_006640752	ENSLOCP00000006944	335 (aa)	XP_006640815	W5MEY5

Gene Model

Click here to download ENSLOCG00000005750's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005750's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005750	gfi1b	53	39.130	ENSLOCG00000009778	prdm5	75	39.130
ENSLOCG00000005750	gfi1b	55	40.000	ENSLOCG00000014144	-	100	40.000
ENSLOCG00000005750	gfi1b	56	42.647	ENSLOCG00000000544	znf319b	87	42.647
ENSLOCG00000005750	gfi1b	79	36.264	ENSLOCG00000000947	znf341	50	46.939
ENSLOCG00000005750	gfi1b	51	39.167	ENSLOCG00000004887	SNAI3	87	41.892
ENSLOCG00000005750	gfi1b	61	39.375	ENSLOCG00000016466	-	98	39.375
ENSLOCG00000005750	gfi1b	57	33.673	ENSLOCG00000007573	scrt1b	68	33.673
ENSLOCG00000005750	gfi1b	54	44.578	ENSLOCG00000017422	-	73	44.578
ENSLOCG00000005750	gfi1b	50	40.625	ENSLOCG00000004661	-	99	40.625
ENSLOCG00000005750	gfi1b	56	42.647	ENSLOCG00000003678	znf319b	87	42.647
ENSLOCG00000005750	gfi1b	50	38.509	ENSLOCG00000017736	znf648	59	38.509
ENSLOCG00000005750	gfi1b	63	41.791	ENSLOCG00000017864	-	99	41.791
ENSLOCG00000005750	gfi1b	77	45.679	ENSLOCG00000003926	znf236	61	45.679
ENSLOCG00000005750	gfi1b	51	36.134	ENSLOCG00000004443	snai1a	57	36.134
ENSLOCG00000005750	gfi1b	52	42.177	ENSLOCG00000014366	-	94	42.177
ENSLOCG00000005750	gfi1b	64	40.854	ENSLOCG00000004208	-	99	40.854
ENSLOCG00000005750	gfi1b	54	45.082	ENSLOCG00000000714	-	88	45.082

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005750	gfi1b	100	68.222	ENSAPOG00000001296	gfi1b	100	68.222	Acanthochromis_polyacanthus
ENSLOCG00000005750	gfi1b	73	79.918	ENSACIG00000002190	gfi1b	79	79.918	Amphilophus_citrinellus
ENSLOCG00000005750	gfi1b	100	68.935	ENSAOCG00000021187	gfi1b	100	68.935	Amphiprion_ocellaris
ENSLOCG00000005750	gfi1b	100	68.513	ENSAPEG00000016196	gfi1b	100	68.513	Amphiprion_percula
ENSLOCG00000005750	gfi1b	100	68.824	ENSATEG00000002534	gfi1b	100	68.824	Anabas_testudineus
ENSLOCG00000005750	gfi1b	100	58.726	ENSAPLG00000003373	GFI1B	100	58.726	Anas_platyrhynchos
ENSLOCG00000005750	gfi1b	99	64.583	ENSACLG00000027053	gfi1b	99	64.583	Astatotilapia_calliptera
ENSLOCG00000005750	gfi1b	100	73.547	ENSAMXG00000037544	GFI1B	100	73.547	Astyanax_mexicanus
ENSLOCG00000005750	gfi1b	100	60.947	ENSCAPG00000010404	GFI1B	100	60.947	Cavia_aperea
ENSLOCG00000005750	gfi1b	100	59.143	ENSCPBG00000021186	GFI1B	100	59.143	Chrysemys_picta_bellii
ENSLOCG00000005750	gfi1b	100	66.176	ENSCSEG00000001315	gfi1b	100	66.176	Cynoglossus_semilaevis
ENSLOCG00000005750	gfi1b	100	67.953	ENSCVAG00000017168	gfi1b	100	67.953	Cyprinodon_variegatus
ENSLOCG00000005750	gfi1b	100	68.876	ENSDARG00000079947	gfi1b	99	86.250	Danio_rerio
ENSLOCG00000005750	gfi1b	61	54.412	ENSEEUG00000012609	-	90	54.412	Erinaceus_europaeus
ENSLOCG00000005750	gfi1b	100	70.554	ENSELUG00000016933	gfi1b	100	70.554	Esox_lucius
ENSLOCG00000005750	gfi1b	100	57.453	ENSFALG00000001479	GFI1B	100	57.453	Ficedula_albicollis
ENSLOCG00000005750	gfi1b	100	68.421	ENSFHEG00000015138	gfi1b	100	68.421	Fundulus_heteroclitus
ENSLOCG00000005750	gfi1b	69	83.691	ENSGMOG00000019123	gfi1b	87	83.691	Gadus_morhua
ENSLOCG00000005750	gfi1b	100	61.337	ENSGALG00000003478	GFI1B	100	61.337	Gallus_gallus
ENSLOCG00000005750	gfi1b	71	82.773	ENSGAFG00000003059	gfi1b	100	82.773	Gambusia_affinis
ENSLOCG00000005750	gfi1b	100	64.543	ENSGACG00000018134	gfi1b	100	64.543	Gasterosteus_aculeatus
ENSLOCG00000005750	gfi1b	100	58.310	ENSGAGG00000021327	GFI1B	100	58.310	Gopherus_agassizii
ENSLOCG00000005750	gfi1b	99	64.583	ENSHBUG00000005451	gfi1b	99	64.583	Haplochromis_burtoni
ENSLOCG00000005750	gfi1b	100	66.567	ENSHCOG00000013713	gfi1b	100	66.567	Hippocampus_comes
ENSLOCG00000005750	gfi1b	100	72.141	ENSIPUG00000012769	gfi1b	100	72.141	Ictalurus_punctatus
ENSLOCG00000005750	gfi1b	99	56.383	ENSJJAG00000016355	Gfi1b	100	56.383	Jaculus_jaculus
ENSLOCG00000005750	gfi1b	100	67.449	ENSKMAG00000016047	gfi1b	100	67.449	Kryptolebias_marmoratus
ENSLOCG00000005750	gfi1b	100	66.954	ENSLBEG00000020297	gfi1b	99	66.954	Labrus_bergylta
ENSLOCG00000005750	gfi1b	100	63.050	ENSLACG00000012207	GFI1B	100	63.050	Latimeria_chalumnae
ENSLOCG00000005750	gfi1b	100	58.974	ENSLAFG00000022367	GFI1B	100	59.483	Loxodonta_africana
ENSLOCG00000005750	gfi1b	100	67.560	ENSMAMG00000003040	gfi1b	100	67.560	Mastacembelus_armatus
ENSLOCG00000005750	gfi1b	99	64.583	ENSMZEG00005015594	gfi1b	99	64.583	Maylandia_zebra
ENSLOCG00000005750	gfi1b	100	61.628	ENSMGAG00000006129	GFI1B	100	61.628	Meleagris_gallopavo
ENSLOCG00000005750	gfi1b	100	65.976	ENSMMOG00000011764	gfi1b	100	65.976	Mola_mola
ENSLOCG00000005750	gfi1b	100	55.405	ENSMODG00000012600	GFI1B	100	55.405	Monodelphis_domestica
ENSLOCG00000005750	gfi1b	100	67.456	ENSMALG00000004034	gfi1b	100	67.456	Monopterus_albus
ENSLOCG00000005750	gfi1b	99	61.988	ENSNGAG00000003333	Gfi1b	100	61.988	Nannospalax_galili
ENSLOCG00000005750	gfi1b	99	64.985	ENSNBRG00000012391	gfi1b	99	64.985	Neolamprologus_brichardi
ENSLOCG00000005750	gfi1b	99	64.497	ENSONIG00000013011	gfi1b	94	89.385	Oreochromis_niloticus
ENSLOCG00000005750	gfi1b	100	64.392	ENSOANG00000014723	GFI1B	100	64.392	Ornithorhynchus_anatinus
ENSLOCG00000005750	gfi1b	100	53.982	ENSORLG00000014390	GFI1B	96	60.351	Oryzias_latipes
ENSLOCG00000005750	gfi1b	100	67.656	ENSORLG00020003719	GFI1B	100	67.656	Oryzias_latipes_hni
ENSLOCG00000005750	gfi1b	100	67.953	ENSORLG00015017142	gfi1b	100	67.953	Oryzias_latipes_hsok
ENSLOCG00000005750	gfi1b	100	65.970	ENSOMEG00000015149	GFI1B	100	64.912	Oryzias_melastigma
ENSLOCG00000005750	gfi1b	100	58.092	ENSOGAG00000008879	GFI1B	100	58.908	Otolemur_garnettii
ENSLOCG00000005750	gfi1b	100	72.141	ENSPKIG00000007643	gfi1b	100	72.141	Paramormyrops_kingsleyae
ENSLOCG00000005750	gfi1b	100	61.337	ENSPSIG00000012112	GFI1B	100	61.337	Pelodiscus_sinensis
ENSLOCG00000005750	gfi1b	99	63.529	ENSPMGG00000006021	gfi1b	99	63.529	Periophthalmus_magnuspinnatus
ENSLOCG00000005750	gfi1b	100	53.439	ENSPCIG00000019724	GFI1B	100	53.439	Phascolarctos_cinereus
ENSLOCG00000005750	gfi1b	100	67.353	ENSPFOG00000003460	gfi1b	100	67.353	Poecilia_formosa
ENSLOCG00000005750	gfi1b	100	67.552	ENSPLAG00000021960	GFI1B	100	67.552	Poecilia_latipinna
ENSLOCG00000005750	gfi1b	100	66.570	ENSPLAG00000017181	GFI1B	100	66.570	Poecilia_latipinna
ENSLOCG00000005750	gfi1b	100	67.847	ENSPMEG00000001556	GFI1B	100	67.847	Poecilia_mexicana
ENSLOCG00000005750	gfi1b	100	67.847	ENSPMEG00000019220	gfi1b	100	67.847	Poecilia_mexicana
ENSLOCG00000005750	gfi1b	100	68.732	ENSPREG00000021718	gfi1b	100	68.732	Poecilia_reticulata
ENSLOCG00000005750	gfi1b	100	63.636	ENSPNYG00000018422	gfi1b	100	63.636	Pundamilia_nyererei
ENSLOCG00000005750	gfi1b	100	70.968	ENSPNAG00000021118	gfi1b	100	70.968	Pygocentrus_nattereri
ENSLOCG00000005750	gfi1b	70	61.049	ENSSHAG00000006462	GFI1B	74	61.049	Sarcophilus_harrisii
ENSLOCG00000005750	gfi1b	83	64.846	ENSSFOG00015011566	gfi1b	90	64.846	Scleropages_formosus
ENSLOCG00000005750	gfi1b	100	68.805	ENSSMAG00000015181	gfi1b	99	69.461	Scophthalmus_maximus
ENSLOCG00000005750	gfi1b	100	68.343	ENSSDUG00000011604	gfi1b	100	68.343	Seriola_dumerili
ENSLOCG00000005750	gfi1b	100	68.047	ENSSLDG00000013823	gfi1b	100	68.047	Seriola_lalandi_dorsalis
ENSLOCG00000005750	gfi1b	100	50.704	ENSSPUG00000016039	GFI1B	100	50.704	Sphenodon_punctatus
ENSLOCG00000005750	gfi1b	100	68.935	ENSSPAG00000022914	gfi1b	100	68.935	Stegastes_partitus
ENSLOCG00000005750	gfi1b	50	94.737	ENSTGUG00000005282	-	99	94.737	Taeniopygia_guttata
ENSLOCG00000005750	gfi1b	100	65.476	ENSTRUG00000004525	gfi1b	100	65.476	Takifugu_rubripes
ENSLOCG00000005750	gfi1b	100	65.075	ENSTNIG00000003834	gfi1b	100	65.075	Tetraodon_nigroviridis
ENSLOCG00000005750	gfi1b	100	44.380	ENSTBEG00000014459	GFI1B	100	44.380	Tupaia_belangeri
ENSLOCG00000005750	gfi1b	100	58.824	ENSXETG00000006263	gfi1b	100	60.411	Xenopus_tropicalis
ENSLOCG00000005750	gfi1b	100	67.847	ENSXMAG00000027589	gfi1b	100	67.847	Xiphophorus_maculatus