EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000005817 (Gene tree)
Gene ID: 102685615
Gene Symbol: tdp2b
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 26943 bases
Position: chrLG11:17140055-17166997
Accession: 102685615
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007026	Exo_endo_phos	PF03372.23	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007034	-	2183	XM_006635796	ENSLOCP00000007026	279 (aa)	XP_006635859	W5MF67

Gene Model

Click here to download ENSLOCG00000005817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005817	tdp2b	98	58.333	ENSG00000111802	TDP2	91	58.333	Homo_sapiens
ENSLOCG00000005817	tdp2b	90	57.480	ENSAPOG00000018379	-	89	57.480	Acanthochromis_polyacanthus
ENSLOCG00000005817	tdp2b	98	58.696	ENSAMEG00000010230	TDP2	99	58.696	Ailuropoda_melanoleuca
ENSLOCG00000005817	tdp2b	62	56.497	ENSAOCG00000010081	-	78	56.497	Amphiprion_ocellaris
ENSLOCG00000005817	tdp2b	92	56.757	ENSAPEG00000004208	-	92	56.757	Amphiprion_percula
ENSLOCG00000005817	tdp2b	97	52.708	ENSATEG00000010663	-	90	52.708	Anabas_testudineus
ENSLOCG00000005817	tdp2b	98	61.649	ENSACAG00000002332	TDP2	75	61.649	Anolis_carolinensis
ENSLOCG00000005817	tdp2b	98	60.870	ENSANAG00000020033	TDP2	76	60.870	Aotus_nancymaae
ENSLOCG00000005817	tdp2b	96	56.458	ENSACLG00000016148	tdp2b	95	56.458	Astatotilapia_calliptera
ENSLOCG00000005817	tdp2b	99	53.405	ENSACLG00000016174	tdp2b	94	53.405	Astatotilapia_calliptera
ENSLOCG00000005817	tdp2b	99	53.047	ENSACLG00000016132	tdp2b	94	53.047	Astatotilapia_calliptera
ENSLOCG00000005817	tdp2b	99	64.727	ENSAMXG00000011775	tdp2b	72	64.727	Astyanax_mexicanus
ENSLOCG00000005817	tdp2b	92	53.558	ENSAMXG00000036549	tdp2a	87	53.558	Astyanax_mexicanus
ENSLOCG00000005817	tdp2b	99	59.140	ENSBTAG00000000365	TDP2	77	59.140	Bos_taurus
ENSLOCG00000005817	tdp2b	88	34.661	WBGene00013405	tdpt-1	72	33.704	Caenorhabditis_elegans
ENSLOCG00000005817	tdp2b	98	59.058	ENSCJAG00000021963	-	76	59.058	Callithrix_jacchus
ENSLOCG00000005817	tdp2b	99	59.712	ENSCJAG00000006074	TDP2	91	59.712	Callithrix_jacchus
ENSLOCG00000005817	tdp2b	98	60.507	ENSCAFG00000010428	TDP2	95	60.507	Canis_familiaris
ENSLOCG00000005817	tdp2b	98	60.507	ENSCAFG00020009994	TDP2	95	60.507	Canis_lupus_dingo
ENSLOCG00000005817	tdp2b	99	59.075	ENSCHIG00000015294	-	95	59.075	Capra_hircus
ENSLOCG00000005817	tdp2b	91	60.870	ENSTSYG00000037199	TDP2	89	57.971	Carlito_syrichta
ENSLOCG00000005817	tdp2b	99	59.928	ENSCPOG00000006390	TDP2	77	59.928	Cavia_porcellus
ENSLOCG00000005817	tdp2b	98	60.145	ENSCCAG00000022734	TDP2	91	60.145	Cebus_capucinus
ENSLOCG00000005817	tdp2b	98	59.420	ENSCATG00000022076	TDP2	91	59.420	Cercocebus_atys
ENSLOCG00000005817	tdp2b	99	59.928	ENSCLAG00000002072	TDP2	77	59.928	Chinchilla_lanigera
ENSLOCG00000005817	tdp2b	98	59.420	ENSCSAG00000007769	TDP2	77	59.420	Chlorocebus_sabaeus
ENSLOCG00000005817	tdp2b	99	61.818	ENSCPBG00000006551	TDP2	70	61.818	Chrysemys_picta_bellii
ENSLOCG00000005817	tdp2b	98	59.783	ENSCANG00000040122	TDP2	91	59.783	Colobus_angolensis_palliatus
ENSLOCG00000005817	tdp2b	98	57.818	ENSCGRG00001000384	Tdp2	74	57.818	Cricetulus_griseus_chok1gshd
ENSLOCG00000005817	tdp2b	98	57.818	ENSCGRG00000010250	Tdp2	78	57.818	Cricetulus_griseus_crigri
ENSLOCG00000005817	tdp2b	99	66.426	ENSCVAG00000003114	tdp2b	75	66.426	Cyprinodon_variegatus
ENSLOCG00000005817	tdp2b	91	54.902	ENSDARG00000069941	tdp2a	57	54.902	Danio_rerio
ENSLOCG00000005817	tdp2b	98	62.989	ENSDARG00000035954	tdp2b	73	62.989	Danio_rerio
ENSLOCG00000005817	tdp2b	98	57.609	ENSDNOG00000044082	TDP2	75	57.609	Dasypus_novemcinctus
ENSLOCG00000005817	tdp2b	97	57.721	ENSETEG00000019096	TDP2	98	57.721	Echinops_telfairi
ENSLOCG00000005817	tdp2b	88	47.177	ENSEBUG00000006535	tdp2a	58	47.177	Eptatretus_burgeri
ENSLOCG00000005817	tdp2b	99	57.040	ENSEASG00005007656	TDP2	77	57.040	Equus_asinus_asinus
ENSLOCG00000005817	tdp2b	99	56.679	ENSECAG00000014264	TDP2	77	56.679	Equus_caballus
ENSLOCG00000005817	tdp2b	99	59.273	ENSEEUG00000010776	TDP2	76	59.273	Erinaceus_europaeus
ENSLOCG00000005817	tdp2b	91	52.549	ENSELUG00000009321	tdp2a	78	52.988	Esox_lucius
ENSLOCG00000005817	tdp2b	98	65.052	ENSELUG00000016449	tdp2b	76	65.052	Esox_lucius
ENSLOCG00000005817	tdp2b	99	59.206	ENSFCAG00000025612	TDP2	77	59.206	Felis_catus
ENSLOCG00000005817	tdp2b	99	59.273	ENSFALG00000004710	TDP2	76	59.273	Ficedula_albicollis
ENSLOCG00000005817	tdp2b	99	59.498	ENSFDAG00000006512	TDP2	96	59.498	Fukomys_damarensis
ENSLOCG00000005817	tdp2b	91	55.814	ENSFHEG00000013560	-	88	55.814	Fundulus_heteroclitus
ENSLOCG00000005817	tdp2b	99	61.818	ENSGALG00000013637	TDP2	75	61.818	Gallus_gallus
ENSLOCG00000005817	tdp2b	99	62.545	ENSGAGG00000002853	TDP2	71	62.545	Gopherus_agassizii
ENSLOCG00000005817	tdp2b	98	57.971	ENSGGOG00000014237	TDP2	91	57.971	Gorilla_gorilla
ENSLOCG00000005817	tdp2b	76	57.346	ENSHBUG00000005421	-	100	52.500	Haplochromis_burtoni
ENSLOCG00000005817	tdp2b	99	64.029	ENSHBUG00000002714	tdp2b	75	64.029	Haplochromis_burtoni
ENSLOCG00000005817	tdp2b	99	59.273	ENSHGLG00000008655	TDP2	77	59.273	Heterocephalus_glaber_female
ENSLOCG00000005817	tdp2b	99	59.273	ENSHGLG00100019087	TDP2	77	59.273	Heterocephalus_glaber_male
ENSLOCG00000005817	tdp2b	99	65.455	ENSIPUG00000013691	tdp2b	73	65.455	Ictalurus_punctatus
ENSLOCG00000005817	tdp2b	99	56.364	ENSJJAG00000021685	Tdp2	79	56.364	Jaculus_jaculus
ENSLOCG00000005817	tdp2b	89	57.371	ENSKMAG00000015485	-	80	57.371	Kryptolebias_marmoratus
ENSLOCG00000005817	tdp2b	99	61.372	ENSLACG00000008852	TDP2	75	61.372	Latimeria_chalumnae
ENSLOCG00000005817	tdp2b	99	60.289	ENSLAFG00000002567	TDP2	79	60.289	Loxodonta_africana
ENSLOCG00000005817	tdp2b	98	59.058	ENSMFAG00000045296	TDP2	91	59.058	Macaca_fascicularis
ENSLOCG00000005817	tdp2b	98	59.058	ENSMMUG00000009803	TDP2	77	59.058	Macaca_mulatta
ENSLOCG00000005817	tdp2b	98	59.058	ENSMNEG00000038003	TDP2	91	59.058	Macaca_nemestrina
ENSLOCG00000005817	tdp2b	98	59.420	ENSMLEG00000028883	TDP2	91	59.420	Mandrillus_leucophaeus
ENSLOCG00000005817	tdp2b	99	64.260	ENSMAMG00000013654	tdp2b	75	64.493	Mastacembelus_armatus
ENSLOCG00000005817	tdp2b	96	56.134	ENSMZEG00005004077	tdp2b	91	56.134	Maylandia_zebra
ENSLOCG00000005817	tdp2b	99	61.151	ENSMZEG00005003950	tdp2b	75	61.151	Maylandia_zebra
ENSLOCG00000005817	tdp2b	86	51.440	ENSMZEG00005003980	-	79	51.440	Maylandia_zebra
ENSLOCG00000005817	tdp2b	99	54.874	ENSMZEG00005004126	tdp2b	94	54.874	Maylandia_zebra
ENSLOCG00000005817	tdp2b	96	51.111	ENSMZEG00005004103	tdp2b	90	51.111	Maylandia_zebra
ENSLOCG00000005817	tdp2b	89	55.200	ENSMZEG00005004055	tdp2b	83	55.200	Maylandia_zebra
ENSLOCG00000005817	tdp2b	98	55.435	ENSMZEG00005004153	tdp2b	96	55.435	Maylandia_zebra
ENSLOCG00000005817	tdp2b	99	61.455	ENSMGAG00000008014	TDP2	75	61.455	Meleagris_gallopavo
ENSLOCG00000005817	tdp2b	98	56.727	ENSMAUG00000014451	Tdp2	74	56.727	Mesocricetus_auratus
ENSLOCG00000005817	tdp2b	99	58.484	ENSMICG00000000039	TDP2	94	58.484	Microcebus_murinus
ENSLOCG00000005817	tdp2b	98	58.545	ENSMOCG00000002823	Tdp2	74	58.545	Microtus_ochrogaster
ENSLOCG00000005817	tdp2b	85	59.167	ENSMODG00000011653	TDP2	73	59.167	Monodelphis_domestica
ENSLOCG00000005817	tdp2b	94	57.358	ENSMALG00000005368	-	89	57.358	Monopterus_albus
ENSLOCG00000005817	tdp2b	98	58.909	MGP_CAROLIEiJ_G0018354	Tdp2	74	58.909	Mus_caroli
ENSLOCG00000005817	tdp2b	98	58.545	ENSMUSG00000035958	Tdp2	74	58.545	Mus_musculus
ENSLOCG00000005817	tdp2b	98	57.091	MGP_PahariEiJ_G0019417	Tdp2	74	57.091	Mus_pahari
ENSLOCG00000005817	tdp2b	98	58.182	MGP_SPRETEiJ_G0019220	Tdp2	73	58.182	Mus_spretus
ENSLOCG00000005817	tdp2b	98	59.058	ENSMPUG00000004516	TDP2	77	59.058	Mustela_putorius_furo
ENSLOCG00000005817	tdp2b	99	57.194	ENSMLUG00000013506	TDP2	77	57.194	Myotis_lucifugus
ENSLOCG00000005817	tdp2b	98	56.159	ENSNGAG00000001375	Tdp2	74	56.159	Nannospalax_galili
ENSLOCG00000005817	tdp2b	98	58.696	ENSNLEG00000002447	TDP2	88	58.696	Nomascus_leucogenys
ENSLOCG00000005817	tdp2b	99	58.484	ENSOPRG00000016299	TDP2	80	58.484	Ochotona_princeps
ENSLOCG00000005817	tdp2b	98	59.783	ENSODEG00000014018	TDP2	94	59.783	Octodon_degus
ENSLOCG00000005817	tdp2b	99	59.206	ENSOCUG00000013773	TDP2	77	59.206	Oryctolagus_cuniculus
ENSLOCG00000005817	tdp2b	91	54.688	ENSORLG00000001661	-	93	54.688	Oryzias_latipes
ENSLOCG00000005817	tdp2b	91	54.688	ENSORLG00020004634	-	93	54.688	Oryzias_latipes_hni
ENSLOCG00000005817	tdp2b	90	48.627	ENSORLG00015008190	-	92	48.627	Oryzias_latipes_hsok
ENSLOCG00000005817	tdp2b	99	51.429	ENSOMEG00000015899	-	93	54.365	Oryzias_melastigma
ENSLOCG00000005817	tdp2b	99	59.206	ENSOGAG00000025303	TDP2	75	59.206	Otolemur_garnettii
ENSLOCG00000005817	tdp2b	98	57.971	ENSPPAG00000029023	TDP2	91	57.971	Pan_paniscus
ENSLOCG00000005817	tdp2b	99	58.845	ENSPPRG00000015398	TDP2	77	58.845	Panthera_pardus
ENSLOCG00000005817	tdp2b	98	58.696	ENSPTIG00000018574	TDP2	95	58.696	Panthera_tigris_altaica
ENSLOCG00000005817	tdp2b	98	57.971	ENSPTRG00000017778	TDP2	91	57.971	Pan_troglodytes
ENSLOCG00000005817	tdp2b	91	62.451	ENSPANG00000017590	TDP2	91	59.058	Papio_anubis
ENSLOCG00000005817	tdp2b	100	65.603	ENSPKIG00000006483	tdp2b	77	65.603	Paramormyrops_kingsleyae
ENSLOCG00000005817	tdp2b	98	61.314	ENSPSIG00000004948	TDP2	95	61.314	Pelodiscus_sinensis
ENSLOCG00000005817	tdp2b	98	57.455	ENSPEMG00000001788	Tdp2	74	57.455	Peromyscus_maniculatus_bairdii
ENSLOCG00000005817	tdp2b	89	44.151	ENSPMAG00000001570	tdp2b	96	44.151	Petromyzon_marinus
ENSLOCG00000005817	tdp2b	99	59.928	ENSPCIG00000007316	TDP2	73	59.928	Phascolarctos_cinereus
ENSLOCG00000005817	tdp2b	91	54.264	ENSPFOG00000017990	-	92	54.264	Poecilia_formosa
ENSLOCG00000005817	tdp2b	91	53.876	ENSPLAG00000019439	-	81	53.876	Poecilia_latipinna
ENSLOCG00000005817	tdp2b	93	53.053	ENSPMEG00000010824	-	88	53.053	Poecilia_mexicana
ENSLOCG00000005817	tdp2b	98	58.333	ENSPPYG00000016282	TDP2	70	58.333	Pongo_abelii
ENSLOCG00000005817	tdp2b	98	59.420	ENSPCOG00000021415	TDP2	97	59.420	Propithecus_coquereli
ENSLOCG00000005817	tdp2b	64	51.955	ENSPNYG00000001944	-	71	52.326	Pundamilia_nyererei
ENSLOCG00000005817	tdp2b	98	52.397	ENSPNYG00000011504	tdp2b	94	52.397	Pundamilia_nyererei
ENSLOCG00000005817	tdp2b	99	62.590	ENSPNYG00000011532	tdp2b	75	62.590	Pundamilia_nyererei
ENSLOCG00000005817	tdp2b	92	57.752	ENSPNAG00000022162	tdp2a	66	57.752	Pygocentrus_nattereri
ENSLOCG00000005817	tdp2b	98	57.091	ENSRNOG00000018246	Tdp2	75	57.091	Rattus_norvegicus
ENSLOCG00000005817	tdp2b	98	59.783	ENSRBIG00000037119	TDP2	91	59.783	Rhinopithecus_bieti
ENSLOCG00000005817	tdp2b	98	59.420	ENSRROG00000005025	TDP2	91	59.420	Rhinopithecus_roxellana
ENSLOCG00000005817	tdp2b	98	59.420	ENSSBOG00000028734	TDP2	91	59.420	Saimiri_boliviensis_boliviensis
ENSLOCG00000005817	tdp2b	99	60.289	ENSSHAG00000002506	TDP2	74	60.289	Sarcophilus_harrisii
ENSLOCG00000005817	tdp2b	94	60.714	ENSSFOG00015011322	-	71	60.870	Scleropages_formosus
ENSLOCG00000005817	tdp2b	98	57.401	ENSSARG00000013547	TDP2	99	57.401	Sorex_araneus
ENSLOCG00000005817	tdp2b	98	58.596	ENSSPUG00000008288	TDP2	78	58.596	Sphenodon_punctatus
ENSLOCG00000005817	tdp2b	99	59.206	ENSSSCG00000001092	TDP2	77	59.206	Sus_scrofa
ENSLOCG00000005817	tdp2b	91	61.265	ENSTGUG00000009035	TDP2	97	61.265	Taeniopygia_guttata
ENSLOCG00000005817	tdp2b	99	62.590	ENSTRUG00000014347	tdp2b	75	62.590	Takifugu_rubripes
ENSLOCG00000005817	tdp2b	96	51.292	ENSTRUG00000012218	-	94	51.292	Takifugu_rubripes
ENSLOCG00000005817	tdp2b	99	64.621	ENSTNIG00000017792	tdp2b	75	64.621	Tetraodon_nigroviridis
ENSLOCG00000005817	tdp2b	91	54.651	ENSTNIG00000010260	TDP2	98	54.651	Tetraodon_nigroviridis
ENSLOCG00000005817	tdp2b	97	61.172	ENSTTRG00000016376	TDP2	75	61.172	Tursiops_truncatus
ENSLOCG00000005817	tdp2b	98	58.333	ENSUAMG00000025939	TDP2	80	58.333	Ursus_americanus
ENSLOCG00000005817	tdp2b	99	57.706	ENSUMAG00000020111	TDP2	93	57.706	Ursus_maritimus
ENSLOCG00000005817	tdp2b	99	61.649	ENSXETG00000014826	tdp2	75	61.649	Xenopus_tropicalis
ENSLOCG00000005817	tdp2b	89	55.159	ENSXCOG00000010778	-	70	55.159	Xiphophorus_couchianus
ENSLOCG00000005817	tdp2b	89	54.762	ENSXMAG00000022252	-	73	54.762	Xiphophorus_maculatus