EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005828 (Gene tree)
Gene ID: 102687053
Gene Symbol: ddx55
Alias: chunp6861|fc32a12|kiaa1595|wu:fc32a12
Full Name: DEAD-box helicase 55
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 9963 bases
Position: chrLG20:7706463-7716425
Accession: 102687053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007039	ResIII	PF04851.15	3.9e-07	1	1
ENSLOCP00000007039	DEAD	PF00270.29	1.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007047	-	4432	XM_006640383	ENSLOCP00000007039	600 (aa)	XP_006640446	W5MF80

Gene Model

Click here to download ENSLOCG00000005828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005828	ddx55	60	34.021	ENSLOCG00000002122	ddx3xa	54	33.081
ENSLOCG00000005828	ddx55	60	31.892	ENSLOCG00000002119	ddx49	72	31.892
ENSLOCG00000005828	ddx55	63	33.417	ENSLOCG00000010887	ddx4	79	33.417
ENSLOCG00000005828	ddx55	59	30.899	ENSLOCG00000000770	ddx6	69	30.899
ENSLOCG00000005828	ddx55	57	31.988	ENSLOCG00000007710	ddx59	52	31.988
ENSLOCG00000005828	ddx55	75	36.543	ENSLOCG00000003108	ddx18	66	36.543
ENSLOCG00000005828	ddx55	61	31.781	ENSLOCG00000015796	eif4a3	83	31.781
ENSLOCG00000005828	ddx55	63	38.961	ENSLOCG00000016473	ddx1	56	38.961
ENSLOCG00000005828	ddx55	64	33.645	ENSLOCG00000005630	ddx31	56	33.645
ENSLOCG00000005828	ddx55	75	38.496	ENSLOCG00000002074	ddx10	58	38.496
ENSLOCG00000005828	ddx55	60	30.318	ENSLOCG00000006858	ddx51	59	30.318
ENSLOCG00000005828	ddx55	60	31.926	ENSLOCG00000013534	ddx5	57	31.926
ENSLOCG00000005828	ddx55	60	34.783	ENSLOCG00000011956	DDX41	57	34.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005828	ddx55	99	74.749	ENSG00000111364	DDX55	99	74.749	Homo_sapiens
ENSLOCG00000005828	ddx55	98	81.324	ENSAPOG00000013126	ddx55	99	81.324	Acanthochromis_polyacanthus
ENSLOCG00000005828	ddx55	97	75.731	ENSAMEG00000015274	DDX55	97	75.731	Ailuropoda_melanoleuca
ENSLOCG00000005828	ddx55	99	79.223	ENSACIG00000007580	ddx55	100	79.223	Amphilophus_citrinellus
ENSLOCG00000005828	ddx55	98	81.356	ENSAOCG00000012037	ddx55	93	81.494	Amphiprion_ocellaris
ENSLOCG00000005828	ddx55	98	81.186	ENSAPEG00000011003	ddx55	93	81.324	Amphiprion_percula
ENSLOCG00000005828	ddx55	97	80.961	ENSATEG00000004029	ddx55	97	80.961	Anabas_testudineus
ENSLOCG00000005828	ddx55	91	74.000	ENSAPLG00000015032	DDX55	97	74.000	Anas_platyrhynchos
ENSLOCG00000005828	ddx55	99	72.408	ENSACAG00000015296	DDX55	99	72.408	Anolis_carolinensis
ENSLOCG00000005828	ddx55	99	60.702	ENSANAG00000034064	DDX55	99	60.535	Aotus_nancymaae
ENSLOCG00000005828	ddx55	98	78.947	ENSACLG00000024691	ddx55	99	78.947	Astatotilapia_calliptera
ENSLOCG00000005828	ddx55	99	74.916	ENSAMXG00000019947	ddx55	99	74.667	Astyanax_mexicanus
ENSLOCG00000005828	ddx55	98	74.533	ENSBTAG00000007266	DDX55	98	70.119	Bos_taurus
ENSLOCG00000005828	ddx55	91	37.168	WBGene00013983	ZK512.2	89	37.764	Caenorhabditis_elegans
ENSLOCG00000005828	ddx55	99	75.585	ENSCJAG00000020471	-	99	75.585	Callithrix_jacchus
ENSLOCG00000005828	ddx55	98	74.703	ENSCAFG00000007452	DDX55	98	74.703	Canis_familiaris
ENSLOCG00000005828	ddx55	90	75.461	ENSCAFG00020015254	DDX55	97	75.461	Canis_lupus_dingo
ENSLOCG00000005828	ddx55	98	75.042	ENSCHIG00000020402	DDX55	98	75.042	Capra_hircus
ENSLOCG00000005828	ddx55	98	75.212	ENSTSYG00000007427	DDX55	98	75.212	Carlito_syrichta
ENSLOCG00000005828	ddx55	94	74.468	ENSCAPG00000005124	DDX55	96	74.643	Cavia_aperea
ENSLOCG00000005828	ddx55	96	75.868	ENSCPOG00000010015	DDX55	96	75.868	Cavia_porcellus
ENSLOCG00000005828	ddx55	99	75.585	ENSCCAG00000021652	DDX55	99	75.585	Cebus_capucinus
ENSLOCG00000005828	ddx55	99	70.772	ENSCATG00000034315	DDX55	99	70.772	Cercocebus_atys
ENSLOCG00000005828	ddx55	99	74.791	ENSCLAG00000011203	DDX55	99	74.791	Chinchilla_lanigera
ENSLOCG00000005828	ddx55	99	74.582	ENSCSAG00000002057	DDX55	99	74.582	Chlorocebus_sabaeus
ENSLOCG00000005828	ddx55	87	78.544	ENSCPBG00000025960	DDX55	99	77.532	Chrysemys_picta_bellii
ENSLOCG00000005828	ddx55	98	53.500	ENSCING00000009622	-	99	53.500	Ciona_intestinalis
ENSLOCG00000005828	ddx55	96	51.536	ENSCSAVG00000003375	-	98	51.706	Ciona_savignyi
ENSLOCG00000005828	ddx55	99	74.916	ENSCANG00000000156	DDX55	99	74.916	Colobus_angolensis_palliatus
ENSLOCG00000005828	ddx55	97	74.355	ENSCGRG00001001652	Ddx55	97	74.355	Cricetulus_griseus_chok1gshd
ENSLOCG00000005828	ddx55	97	74.355	ENSCGRG00000014742	Ddx55	97	74.355	Cricetulus_griseus_crigri
ENSLOCG00000005828	ddx55	99	77.181	ENSCSEG00000012161	ddx55	99	77.181	Cynoglossus_semilaevis
ENSLOCG00000005828	ddx55	98	77.834	ENSCVAG00000006635	ddx55	99	77.834	Cyprinodon_variegatus
ENSLOCG00000005828	ddx55	98	80.847	ENSDARG00000009864	ddx55	99	80.847	Danio_rerio
ENSLOCG00000005828	ddx55	98	74.873	ENSDNOG00000005167	DDX55	97	74.873	Dasypus_novemcinctus
ENSLOCG00000005828	ddx55	95	47.471	FBgn0037561	CG9630	98	47.791	Drosophila_melanogaster
ENSLOCG00000005828	ddx55	92	64.919	ENSETEG00000001826	DDX55	98	64.919	Echinops_telfairi
ENSLOCG00000005828	ddx55	95	63.140	ENSEBUG00000007071	ddx55	98	63.884	Eptatretus_burgeri
ENSLOCG00000005828	ddx55	99	75.084	ENSEASG00005012650	DDX55	98	77.218	Equus_asinus_asinus
ENSLOCG00000005828	ddx55	90	75.830	ENSECAG00000011237	DDX55	87	75.830	Equus_caballus
ENSLOCG00000005828	ddx55	98	64.736	ENSEEUG00000006313	DDX55	98	64.736	Erinaceus_europaeus
ENSLOCG00000005828	ddx55	99	79.466	ENSELUG00000002616	ddx55	99	79.466	Esox_lucius
ENSLOCG00000005828	ddx55	97	76.248	ENSFCAG00000003770	DDX55	97	76.248	Felis_catus
ENSLOCG00000005828	ddx55	99	76.254	ENSFALG00000009300	DDX55	100	76.254	Ficedula_albicollis
ENSLOCG00000005828	ddx55	98	75.042	ENSFDAG00000004680	DDX55	98	75.042	Fukomys_damarensis
ENSLOCG00000005828	ddx55	97	78.929	ENSFHEG00000007912	ddx55	98	78.929	Fundulus_heteroclitus
ENSLOCG00000005828	ddx55	96	75.475	ENSGMOG00000017762	ddx55	96	75.648	Gadus_morhua
ENSLOCG00000005828	ddx55	98	76.701	ENSGALG00000003298	DDX55	99	76.701	Gallus_gallus
ENSLOCG00000005828	ddx55	97	78.866	ENSGAFG00000004388	ddx55	99	78.866	Gambusia_affinis
ENSLOCG00000005828	ddx55	97	79.002	ENSGACG00000015591	ddx55	97	77.000	Gasterosteus_aculeatus
ENSLOCG00000005828	ddx55	90	78.044	ENSGAGG00000014403	DDX55	99	78.044	Gopherus_agassizii
ENSLOCG00000005828	ddx55	99	74.582	ENSGGOG00000026102	DDX55	99	74.582	Gorilla_gorilla
ENSLOCG00000005828	ddx55	98	78.947	ENSHBUG00000011523	ddx55	99	78.947	Haplochromis_burtoni
ENSLOCG00000005828	ddx55	99	73.790	ENSHGLG00000019202	DDX55	99	73.790	Heterocephalus_glaber_female
ENSLOCG00000005828	ddx55	99	73.790	ENSHGLG00100019440	DDX55	99	73.790	Heterocephalus_glaber_male
ENSLOCG00000005828	ddx55	97	70.497	ENSHCOG00000004710	ddx55	99	70.497	Hippocampus_comes
ENSLOCG00000005828	ddx55	99	79.967	ENSIPUG00000014551	ddx55	99	79.967	Ictalurus_punctatus
ENSLOCG00000005828	ddx55	98	75.722	ENSSTOG00000006121	DDX55	98	75.722	Ictidomys_tridecemlineatus
ENSLOCG00000005828	ddx55	99	75.960	ENSJJAG00000013401	Ddx55	99	75.960	Jaculus_jaculus
ENSLOCG00000005828	ddx55	98	78.475	ENSKMAG00000022006	ddx55	99	78.475	Kryptolebias_marmoratus
ENSLOCG00000005828	ddx55	99	79.700	ENSLBEG00000021815	ddx55	99	79.700	Labrus_bergylta
ENSLOCG00000005828	ddx55	99	78.547	ENSLACG00000017050	DDX55	99	78.547	Latimeria_chalumnae
ENSLOCG00000005828	ddx55	98	75.850	ENSLAFG00000007293	DDX55	98	75.850	Loxodonta_africana
ENSLOCG00000005828	ddx55	99	74.582	ENSMFAG00000038165	DDX55	99	74.582	Macaca_fascicularis
ENSLOCG00000005828	ddx55	99	74.582	ENSMMUG00000013178	DDX55	99	74.582	Macaca_mulatta
ENSLOCG00000005828	ddx55	99	74.582	ENSMNEG00000028630	DDX55	99	74.582	Macaca_nemestrina
ENSLOCG00000005828	ddx55	99	74.916	ENSMLEG00000039187	DDX55	99	74.916	Mandrillus_leucophaeus
ENSLOCG00000005828	ddx55	100	79.667	ENSMAMG00000011297	ddx55	99	79.667	Mastacembelus_armatus
ENSLOCG00000005828	ddx55	98	78.947	ENSMZEG00005008047	ddx55	99	78.947	Maylandia_zebra
ENSLOCG00000005828	ddx55	99	72.391	ENSMGAG00000003185	DDX55	98	73.254	Meleagris_gallopavo
ENSLOCG00000005828	ddx55	97	75.043	ENSMAUG00000020054	Ddx55	97	75.043	Mesocricetus_auratus
ENSLOCG00000005828	ddx55	99	67.726	ENSMICG00000006477	DDX55	99	67.726	Microcebus_murinus
ENSLOCG00000005828	ddx55	96	75.694	ENSMOCG00000021289	Ddx55	96	75.694	Microtus_ochrogaster
ENSLOCG00000005828	ddx55	97	81.552	ENSMMOG00000009411	ddx55	97	81.552	Mola_mola
ENSLOCG00000005828	ddx55	93	77.838	ENSMODG00000012519	DDX55	96	77.838	Monodelphis_domestica
ENSLOCG00000005828	ddx55	100	73.833	ENSMALG00000018543	ddx55	99	73.833	Monopterus_albus
ENSLOCG00000005828	ddx55	74	78.876	MGP_CAROLIEiJ_G0027755	-	99	78.876	Mus_caroli
ENSLOCG00000005828	ddx55	99	74.333	ENSMUSG00000029389	Ddx55	100	74.333	Mus_musculus
ENSLOCG00000005828	ddx55	99	71.667	MGP_PahariEiJ_G0024335	Ddx55	100	71.667	Mus_pahari
ENSLOCG00000005828	ddx55	99	74.167	MGP_SPRETEiJ_G0028753	Ddx55	100	74.167	Mus_spretus
ENSLOCG00000005828	ddx55	99	70.667	ENSMPUG00000001505	DDX55	99	70.667	Mustela_putorius_furo
ENSLOCG00000005828	ddx55	87	64.751	ENSMLUG00000025148	-	100	64.576	Myotis_lucifugus
ENSLOCG00000005828	ddx55	98	67.797	ENSMLUG00000001265	-	98	67.797	Myotis_lucifugus
ENSLOCG00000005828	ddx55	96	75.694	ENSNGAG00000020564	Ddx55	96	75.694	Nannospalax_galili
ENSLOCG00000005828	ddx55	98	78.947	ENSNBRG00000018748	ddx55	99	78.947	Neolamprologus_brichardi
ENSLOCG00000005828	ddx55	99	74.749	ENSNLEG00000001658	DDX55	99	74.749	Nomascus_leucogenys
ENSLOCG00000005828	ddx55	98	74.617	ENSMEUG00000013689	DDX55	98	74.617	Notamacropus_eugenii
ENSLOCG00000005828	ddx55	97	75.904	ENSOPRG00000000850	DDX55	97	75.904	Ochotona_princeps
ENSLOCG00000005828	ddx55	93	61.607	ENSODEG00000016592	-	99	62.075	Octodon_degus
ENSLOCG00000005828	ddx55	99	73.367	ENSODEG00000009632	-	100	73.367	Octodon_degus
ENSLOCG00000005828	ddx55	98	78.983	ENSONIG00000015311	ddx55	97	78.983	Oreochromis_niloticus
ENSLOCG00000005828	ddx55	92	79.024	ENSOANG00000015332	DDX55	98	79.024	Ornithorhynchus_anatinus
ENSLOCG00000005828	ddx55	99	74.791	ENSOCUG00000003456	DDX55	99	74.791	Oryctolagus_cuniculus
ENSLOCG00000005828	ddx55	97	79.138	ENSORLG00000029482	ddx55	98	79.138	Oryzias_latipes
ENSLOCG00000005828	ddx55	97	78.793	ENSORLG00015004885	ddx55	98	79.083	Oryzias_latipes_hsok
ENSLOCG00000005828	ddx55	97	80.103	ENSOMEG00000023619	ddx55	98	80.103	Oryzias_melastigma
ENSLOCG00000005828	ddx55	98	73.684	ENSOGAG00000009195	DDX55	98	73.684	Otolemur_garnettii
ENSLOCG00000005828	ddx55	96	76.256	ENSOARG00000003364	DDX55	96	76.256	Ovis_aries
ENSLOCG00000005828	ddx55	99	74.916	ENSPPAG00000005988	DDX55	99	74.916	Pan_paniscus
ENSLOCG00000005828	ddx55	97	76.420	ENSPPRG00000012157	DDX55	97	76.420	Panthera_pardus
ENSLOCG00000005828	ddx55	91	77.615	ENSPTIG00000011490	DDX55	91	77.615	Panthera_tigris_altaica
ENSLOCG00000005828	ddx55	99	74.749	ENSPTRG00000005601	DDX55	99	74.749	Pan_troglodytes
ENSLOCG00000005828	ddx55	99	74.916	ENSPANG00000007905	DDX55	99	74.916	Papio_anubis
ENSLOCG00000005828	ddx55	97	82.504	ENSPKIG00000023661	ddx55	99	82.504	Paramormyrops_kingsleyae
ENSLOCG00000005828	ddx55	91	78.976	ENSPSIG00000012901	DDX55	100	77.617	Pelodiscus_sinensis
ENSLOCG00000005828	ddx55	90	76.753	ENSPMGG00000017224	ddx55	100	76.753	Periophthalmus_magnuspinnatus
ENSLOCG00000005828	ddx55	99	74.167	ENSPEMG00000018052	Ddx55	100	74.167	Peromyscus_maniculatus_bairdii
ENSLOCG00000005828	ddx55	86	66.602	ENSPMAG00000007486	ddx55	99	66.475	Petromyzon_marinus
ENSLOCG00000005828	ddx55	90	78.229	ENSPCIG00000010973	DDX55	98	78.229	Phascolarctos_cinereus
ENSLOCG00000005828	ddx55	97	79.452	ENSPFOG00000006970	ddx55	91	79.452	Poecilia_formosa
ENSLOCG00000005828	ddx55	97	79.553	ENSPLAG00000014735	ddx55	99	79.553	Poecilia_latipinna
ENSLOCG00000005828	ddx55	97	79.553	ENSPMEG00000020635	ddx55	99	79.553	Poecilia_mexicana
ENSLOCG00000005828	ddx55	97	79.210	ENSPREG00000016644	ddx55	99	79.210	Poecilia_reticulata
ENSLOCG00000005828	ddx55	98	73.514	ENSPPYG00000005091	DDX55	98	73.514	Pongo_abelii
ENSLOCG00000005828	ddx55	97	76.076	ENSPCAG00000014127	DDX55	97	76.076	Procavia_capensis
ENSLOCG00000005828	ddx55	98	74.873	ENSPCOG00000011189	DDX55	98	74.873	Propithecus_coquereli
ENSLOCG00000005828	ddx55	98	74.703	ENSPVAG00000015321	DDX55	98	74.703	Pteropus_vampyrus
ENSLOCG00000005828	ddx55	98	78.778	ENSPNYG00000003669	ddx55	99	78.778	Pundamilia_nyererei
ENSLOCG00000005828	ddx55	100	81.167	ENSPNAG00000012855	ddx55	99	81.167	Pygocentrus_nattereri
ENSLOCG00000005828	ddx55	99	73.667	ENSRNOG00000001043	Ddx55	100	73.667	Rattus_norvegicus
ENSLOCG00000005828	ddx55	99	74.080	ENSRBIG00000044699	DDX55	99	74.080	Rhinopithecus_bieti
ENSLOCG00000005828	ddx55	99	74.415	ENSRROG00000024824	DDX55	99	74.415	Rhinopithecus_roxellana
ENSLOCG00000005828	ddx55	89	37.456	YFL002C	-	93	37.221	Saccharomyces_cerevisiae
ENSLOCG00000005828	ddx55	99	74.916	ENSSBOG00000024833	DDX55	99	74.916	Saimiri_boliviensis_boliviensis
ENSLOCG00000005828	ddx55	91	78.938	ENSSHAG00000015820	DDX55	96	78.938	Sarcophilus_harrisii
ENSLOCG00000005828	ddx55	99	82.441	ENSSFOG00015017496	ddx55	98	82.441	Scleropages_formosus
ENSLOCG00000005828	ddx55	99	79.568	ENSSMAG00000010441	ddx55	99	79.734	Scophthalmus_maximus
ENSLOCG00000005828	ddx55	99	79.833	ENSSDUG00000023568	ddx55	99	79.833	Seriola_dumerili
ENSLOCG00000005828	ddx55	99	74.624	ENSSLDG00000011299	ddx55	99	74.624	Seriola_lalandi_dorsalis
ENSLOCG00000005828	ddx55	90	76.809	ENSSARG00000003842	DDX55	97	76.147	Sorex_araneus
ENSLOCG00000005828	ddx55	98	76.661	ENSSPUG00000012798	DDX55	98	76.661	Sphenodon_punctatus
ENSLOCG00000005828	ddx55	99	80.640	ENSSPAG00000011806	ddx55	99	80.640	Stegastes_partitus
ENSLOCG00000005828	ddx55	90	76.384	ENSSSCG00000009771	DDX55	98	76.384	Sus_scrofa
ENSLOCG00000005828	ddx55	96	76.817	ENSTGUG00000005302	-	99	76.740	Taeniopygia_guttata
ENSLOCG00000005828	ddx55	99	78.188	ENSTRUG00000018525	ddx55	99	78.188	Takifugu_rubripes
ENSLOCG00000005828	ddx55	98	79.145	ENSTNIG00000013515	DDX55	97	79.145	Tetraodon_nigroviridis
ENSLOCG00000005828	ddx55	74	72.297	ENSTBEG00000010822	DDX55	100	72.297	Tupaia_belangeri
ENSLOCG00000005828	ddx55	98	75.382	ENSTTRG00000007251	DDX55	98	75.382	Tursiops_truncatus
ENSLOCG00000005828	ddx55	97	75.559	ENSUAMG00000012589	DDX55	97	75.559	Ursus_americanus
ENSLOCG00000005828	ddx55	90	76.952	ENSUMAG00000003869	DDX55	97	76.952	Ursus_maritimus
ENSLOCG00000005828	ddx55	92	69.730	ENSVPAG00000007028	DDX55	99	69.730	Vicugna_pacos
ENSLOCG00000005828	ddx55	98	74.703	ENSVVUG00000027506	DDX55	99	76.305	Vulpes_vulpes
ENSLOCG00000005828	ddx55	100	76.167	ENSXETG00000005825	ddx55	99	76.167	Xenopus_tropicalis
ENSLOCG00000005828	ddx55	97	79.553	ENSXCOG00000010120	ddx55	99	79.553	Xiphophorus_couchianus
ENSLOCG00000005828	ddx55	97	79.725	ENSXMAG00000011731	ddx55	99	79.725	Xiphophorus_maculatus