EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLOCG00000005879 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC102689962
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 792 bases
Position: chrLG26:10352922-10353713
Accession: 102689962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000007099	PARP	PF00644.20	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000007107	-	597	XM_006642314	ENSLOCP00000007099	199 (aa)	-	W5MFE0

Gene Model

Click here to download ENSLOCG00000005879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000005879's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLOCG00000005879	-	72	50.000	ENSLOCG00000005897	gig2e	61	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000005879	-	58	47.899	ENSAPOG00000010190	gig2h	77	47.899	Acanthochromis_polyacanthus
ENSLOCG00000005879	-	77	50.307	ENSAPOG00000002358	gig2p	90	50.307	Acanthochromis_polyacanthus
ENSLOCG00000005879	-	60	53.968	ENSACIG00000006917	-	79	53.968	Amphilophus_citrinellus
ENSLOCG00000005879	-	56	53.448	ENSACIG00000018452	-	75	53.448	Amphilophus_citrinellus
ENSLOCG00000005879	-	62	50.000	ENSACIG00000023385	-	84	50.000	Amphilophus_citrinellus
ENSLOCG00000005879	-	55	53.509	ENSACIG00000009062	-	80	53.509	Amphilophus_citrinellus
ENSLOCG00000005879	-	95	46.635	ENSACIG00000006934	gig2p	100	46.635	Amphilophus_citrinellus
ENSLOCG00000005879	-	98	42.986	ENSAOCG00000003416	gig2p	97	42.986	Amphiprion_ocellaris
ENSLOCG00000005879	-	75	47.967	ENSAOCG00000010944	-	72	47.967	Amphiprion_ocellaris
ENSLOCG00000005879	-	98	42.534	ENSAPEG00000017256	gig2p	97	42.534	Amphiprion_percula
ENSLOCG00000005879	-	69	52.027	ENSATEG00000003250	gig2p	70	52.027	Anabas_testudineus
ENSLOCG00000005879	-	69	51.034	ENSATEG00000003163	gig2p	92	51.773	Anabas_testudineus
ENSLOCG00000005879	-	71	53.020	ENSATEG00000003204	gig2p	93	53.020	Anabas_testudineus
ENSLOCG00000005879	-	89	49.741	ENSATEG00000003229	gig2p	95	49.741	Anabas_testudineus
ENSLOCG00000005879	-	62	48.120	ENSACLG00000019044	gig2g	80	53.043	Astatotilapia_calliptera
ENSLOCG00000005879	-	72	50.968	ENSACLG00000006461	-	70	50.968	Astatotilapia_calliptera
ENSLOCG00000005879	-	99	43.925	ENSAMXG00000025187	gig2p	98	43.925	Astyanax_mexicanus
ENSLOCG00000005879	-	64	54.237	ENSAMXG00000004144	-	87	54.237	Astyanax_mexicanus
ENSLOCG00000005879	-	54	59.821	ENSAMXG00000030672	-	77	59.821	Astyanax_mexicanus
ENSLOCG00000005879	-	65	47.761	ENSAMXG00000016000	-	86	44.030	Astyanax_mexicanus
ENSLOCG00000005879	-	62	52.344	ENSAMXG00000026038	-	90	52.344	Astyanax_mexicanus
ENSLOCG00000005879	-	99	61.058	ENSAMXG00000026111	-	99	61.058	Astyanax_mexicanus
ENSLOCG00000005879	-	62	51.181	ENSAMXG00000026110	gig2d	85	51.181	Astyanax_mexicanus
ENSLOCG00000005879	-	63	50.769	ENSAMXG00000041087	-	87	50.769	Astyanax_mexicanus
ENSLOCG00000005879	-	67	51.449	ENSAMXG00000032512	gig2d	89	51.449	Astyanax_mexicanus
ENSLOCG00000005879	-	98	50.246	ENSAMXG00000025547	gig2o	97	50.246	Astyanax_mexicanus
ENSLOCG00000005879	-	62	50.781	ENSAMXG00000043196	-	90	50.781	Astyanax_mexicanus
ENSLOCG00000005879	-	78	48.214	ENSCVAG00000006837	gig2p	81	48.214	Cyprinodon_variegatus
ENSLOCG00000005879	-	59	52.846	ENSCVAG00000006821	gig2p	73	52.846	Cyprinodon_variegatus
ENSLOCG00000005879	-	55	50.000	ENSCVAG00000003734	-	84	50.000	Cyprinodon_variegatus
ENSLOCG00000005879	-	66	45.324	ENSCVAG00000003718	-	92	45.324	Cyprinodon_variegatus
ENSLOCG00000005879	-	63	48.462	ENSDARG00000099325	gig2i	82	48.462	Danio_rerio
ENSLOCG00000005879	-	99	45.498	ENSDARG00000088260	gig2p	96	45.498	Danio_rerio
ENSLOCG00000005879	-	99	48.058	ENSDARG00000086903	gig2o	94	48.058	Danio_rerio
ENSLOCG00000005879	-	63	45.385	ENSDARG00000069769	gig2j	84	45.385	Danio_rerio
ENSLOCG00000005879	-	60	51.220	ENSDARG00000099735	gig2f	78	51.220	Danio_rerio
ENSLOCG00000005879	-	62	47.656	ENSDARG00000098463	gig2g	83	47.656	Danio_rerio
ENSLOCG00000005879	-	63	46.923	ENSDARG00000098772	gig2d	85	46.923	Danio_rerio
ENSLOCG00000005879	-	66	50.000	ENSDARG00000075757	gig2e	88	50.781	Danio_rerio
ENSLOCG00000005879	-	62	47.656	ENSDARG00000103444	gig2h	83	47.656	Danio_rerio
ENSLOCG00000005879	-	61	49.206	ENSDARG00000091730	gig2l	100	53.982	Danio_rerio
ENSLOCG00000005879	-	98	43.062	ENSELUG00000017166	gig2o	98	43.062	Esox_lucius
ENSLOCG00000005879	-	99	45.249	ENSELUG00000017477	gig2p	67	46.154	Esox_lucius
ENSLOCG00000005879	-	99	44.395	ENSFHEG00000017724	gig2p	98	44.749	Fundulus_heteroclitus
ENSLOCG00000005879	-	100	46.364	ENSFHEG00000017712	-	91	46.364	Fundulus_heteroclitus
ENSLOCG00000005879	-	69	50.000	ENSGAFG00000009453	gig2p	95	50.340	Gambusia_affinis
ENSLOCG00000005879	-	70	49.007	ENSGAFG00000009440	gig2p	93	49.007	Gambusia_affinis
ENSLOCG00000005879	-	69	53.061	ENSHBUG00000010491	gig2p	66	53.061	Haplochromis_burtoni
ENSLOCG00000005879	-	79	48.810	ENSHBUG00000010473	-	95	49.102	Haplochromis_burtoni
ENSLOCG00000005879	-	59	53.279	ENSHBUG00000018939	-	82	53.279	Haplochromis_burtoni
ENSLOCG00000005879	-	56	48.276	ENSHBUG00000019410	-	82	48.696	Haplochromis_burtoni
ENSLOCG00000005879	-	99	59.135	ENSIPUG00000001531	-	99	59.135	Ictalurus_punctatus
ENSLOCG00000005879	-	99	43.902	ENSIPUG00000009280	gig2o	85	45.366	Ictalurus_punctatus
ENSLOCG00000005879	-	100	43.192	ENSIPUG00000022554	gig2p	98	43.192	Ictalurus_punctatus
ENSLOCG00000005879	-	62	50.781	ENSIPUG00000001510	-	91	50.781	Ictalurus_punctatus
ENSLOCG00000005879	-	56	49.138	ENSIPUG00000007003	-	87	49.138	Ictalurus_punctatus
ENSLOCG00000005879	-	64	52.273	ENSIPUG00000005433	-	78	47.727	Ictalurus_punctatus
ENSLOCG00000005879	-	55	55.263	ENSIPUG00000000101	-	76	50.877	Ictalurus_punctatus
ENSLOCG00000005879	-	61	46.875	ENSIPUG00000007035	-	77	46.875	Ictalurus_punctatus
ENSLOCG00000005879	-	100	45.000	ENSKMAG00000007923	-	97	45.000	Kryptolebias_marmoratus
ENSLOCG00000005879	-	96	42.727	ENSKMAG00000007907	gig2p	98	42.727	Kryptolebias_marmoratus
ENSLOCG00000005879	-	89	45.226	ENSLBEG00000018778	gig2p	94	45.455	Labrus_bergylta
ENSLOCG00000005879	-	98	43.056	ENSLBEG00000018765	-	98	43.056	Labrus_bergylta
ENSLOCG00000005879	-	70	53.061	ENSLACG00000015833	-	92	53.061	Latimeria_chalumnae
ENSLOCG00000005879	-	62	52.713	ENSLACG00000000239	-	85	52.206	Latimeria_chalumnae
ENSLOCG00000005879	-	100	57.692	ENSLACG00000018888	-	98	57.692	Latimeria_chalumnae
ENSLOCG00000005879	-	99	45.498	ENSLACG00000015882	gig2p	99	45.498	Latimeria_chalumnae
ENSLOCG00000005879	-	99	44.292	ENSMAMG00000011285	gig2p	98	44.292	Mastacembelus_armatus
ENSLOCG00000005879	-	99	45.205	ENSMZEG00005013815	-	94	45.205	Maylandia_zebra
ENSLOCG00000005879	-	99	44.292	ENSMMOG00000005594	gig2p	97	46.119	Mola_mola
ENSLOCG00000005879	-	88	48.958	ENSMMOG00000005597	-	87	48.958	Mola_mola
ENSLOCG00000005879	-	100	47.248	ENSMALG00000008417	gig2p	97	47.248	Monopterus_albus
ENSLOCG00000005879	-	79	48.810	ENSNBRG00000000872	-	95	49.102	Neolamprologus_brichardi
ENSLOCG00000005879	-	60	51.220	ENSNBRG00000009062	-	76	51.220	Neolamprologus_brichardi
ENSLOCG00000005879	-	56	47.826	ENSNBRG00000009049	-	72	47.826	Neolamprologus_brichardi
ENSLOCG00000005879	-	93	44.898	ENSNBRG00000000843	gig2p	98	44.898	Neolamprologus_brichardi
ENSLOCG00000005879	-	78	51.299	ENSONIG00000011824	gig2p	98	51.299	Oreochromis_niloticus
ENSLOCG00000005879	-	60	51.613	ENSONIG00000009460	gig2h	89	51.613	Oreochromis_niloticus
ENSLOCG00000005879	-	99	48.598	ENSORLG00000010287	gig2p	98	48.598	Oryzias_latipes
ENSLOCG00000005879	-	95	44.118	ENSORLG00000028073	-	99	44.118	Oryzias_latipes
ENSLOCG00000005879	-	70	52.667	ENSORLG00020008422	gig2p	96	52.667	Oryzias_latipes_hni
ENSLOCG00000005879	-	57	51.667	ENSORLG00020008444	-	71	48.485	Oryzias_latipes_hni
ENSLOCG00000005879	-	61	54.331	ENSORLG00015022600	gig2p	93	54.331	Oryzias_latipes_hsok
ENSLOCG00000005879	-	59	45.614	ENSORLG00015008571	gig2g	50	45.614	Oryzias_latipes_hsok
ENSLOCG00000005879	-	95	43.627	ENSORLG00015022642	-	99	43.627	Oryzias_latipes_hsok
ENSLOCG00000005879	-	65	45.522	ENSOMEG00000013250	-	83	44.521	Oryzias_melastigma
ENSLOCG00000005879	-	58	46.218	ENSOMEG00000015253	-	80	46.218	Oryzias_melastigma
ENSLOCG00000005879	-	69	44.828	ENSOMEG00000013589	-	85	44.828	Oryzias_melastigma
ENSLOCG00000005879	-	60	45.528	ENSOMEG00000015239	-	78	45.528	Oryzias_melastigma
ENSLOCG00000005879	-	58	51.639	ENSOMEG00000007340	-	70	51.639	Oryzias_melastigma
ENSLOCG00000005879	-	56	54.701	ENSPKIG00000000878	-	89	48.718	Paramormyrops_kingsleyae
ENSLOCG00000005879	-	58	54.167	ENSPKIG00000014390	-	90	48.333	Paramormyrops_kingsleyae
ENSLOCG00000005879	-	58	50.833	ENSPKIG00000014377	-	90	45.833	Paramormyrops_kingsleyae
ENSLOCG00000005879	-	61	51.969	ENSPKIG00000000927	-	71	51.969	Paramormyrops_kingsleyae
ENSLOCG00000005879	-	54	56.250	ENSPKIG00000001665	-	76	49.107	Paramormyrops_kingsleyae
ENSLOCG00000005879	-	56	53.846	ENSPKIG00000000863	-	71	48.718	Paramormyrops_kingsleyae
ENSLOCG00000005879	-	59	47.692	ENSPKIG00000003192	-	81	42.308	Paramormyrops_kingsleyae
ENSLOCG00000005879	-	69	51.220	ENSPMAG00000005660	-	94	51.220	Petromyzon_marinus
ENSLOCG00000005879	-	68	50.714	ENSPMAG00000010332	-	90	50.714	Petromyzon_marinus
ENSLOCG00000005879	-	100	44.545	ENSPFOG00000006191	gig2p	95	49.351	Poecilia_formosa
ENSLOCG00000005879	-	78	47.101	ENSPFOG00000005274	gig2g	100	47.445	Poecilia_formosa
ENSLOCG00000005879	-	99	44.292	ENSPMEG00000018167	gig2p	99	44.292	Poecilia_mexicana
ENSLOCG00000005879	-	95	45.024	ENSPMEG00000018196	-	94	45.024	Poecilia_mexicana
ENSLOCG00000005879	-	67	48.551	ENSPMEG00000007652	gig2h	84	48.551	Poecilia_mexicana
ENSLOCG00000005879	-	86	47.594	ENSPREG00000005273	-	86	47.594	Poecilia_reticulata
ENSLOCG00000005879	-	76	48.101	ENSPREG00000005283	gig2p	95	48.101	Poecilia_reticulata
ENSLOCG00000005879	-	61	50.413	ENSPNYG00000009654	-	95	50.413	Pundamilia_nyererei
ENSLOCG00000005879	-	71	49.673	ENSPNYG00000021214	-	86	49.673	Pundamilia_nyererei
ENSLOCG00000005879	-	59	49.180	ENSPNYG00000009627	-	69	49.180	Pundamilia_nyererei
ENSLOCG00000005879	-	69	53.061	ENSPNYG00000021226	gig2p	66	53.061	Pundamilia_nyererei
ENSLOCG00000005879	-	56	54.701	ENSPNAG00000026625	-	84	50.427	Pygocentrus_nattereri
ENSLOCG00000005879	-	99	63.462	ENSPNAG00000015816	-	99	63.462	Pygocentrus_nattereri
ENSLOCG00000005879	-	60	52.419	ENSPNAG00000015845	gig2d	82	52.419	Pygocentrus_nattereri
ENSLOCG00000005879	-	99	50.490	ENSPNAG00000012118	gig2o	98	49.754	Pygocentrus_nattereri
ENSLOCG00000005879	-	58	49.587	ENSPNAG00000026634	-	92	44.628	Pygocentrus_nattereri
ENSLOCG00000005879	-	61	48.031	ENSPNAG00000021255	-	81	44.882	Pygocentrus_nattereri
ENSLOCG00000005879	-	99	43.458	ENSPNAG00000014831	gig2p	99	43.458	Pygocentrus_nattereri
ENSLOCG00000005879	-	64	51.145	ENSPNAG00000015811	gig2d	87	51.145	Pygocentrus_nattereri
ENSLOCG00000005879	-	100	46.117	ENSSFOG00015007829	gig2o	96	46.860	Scleropages_formosus
ENSLOCG00000005879	-	70	54.237	ENSSFOG00015005900	-	92	54.237	Scleropages_formosus
ENSLOCG00000005879	-	100	50.472	ENSSFOG00015009887	gig2p	97	50.711	Scleropages_formosus
ENSLOCG00000005879	-	100	60.680	ENSSFOG00015005862	-	99	61.650	Scleropages_formosus
ENSLOCG00000005879	-	60	53.226	ENSSFOG00015005869	-	58	53.226	Scleropages_formosus
ENSLOCG00000005879	-	68	48.921	ENSSFOG00015005876	-	86	48.921	Scleropages_formosus
ENSLOCG00000005879	-	99	44.954	ENSSMAG00000008317	gig2p	98	44.954	Scophthalmus_maximus
ENSLOCG00000005879	-	97	44.700	ENSSMAG00000008329	-	96	44.700	Scophthalmus_maximus
ENSLOCG00000005879	-	72	49.020	ENSSDUG00000018079	-	91	49.020	Seriola_dumerili
ENSLOCG00000005879	-	93	47.475	ENSSDUG00000018069	gig2p	93	47.475	Seriola_dumerili
ENSLOCG00000005879	-	99	45.833	ENSSLDG00000018358	gig2p	96	45.833	Seriola_lalandi_dorsalis
ENSLOCG00000005879	-	74	49.689	ENSSPAG00000005252	gig2p	83	49.689	Stegastes_partitus
ENSLOCG00000005879	-	90	47.396	ENSTRUG00000023008	gig2p	90	47.396	Takifugu_rubripes
ENSLOCG00000005879	-	71	47.586	ENSXETG00000032410	-	91	48.120	Xenopus_tropicalis
ENSLOCG00000005879	-	100	47.273	ENSXMAG00000019444	-	99	47.273	Xiphophorus_maculatus